Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021785
(737 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_43370| Best HMM Match : RhoGAP (HMM E-Value=1.6e-18) 59 3e-09
SB_48764| Best HMM Match : RhoGAP (HMM E-Value=0) 58 6e-09
SB_31002| Best HMM Match : RhoGAP (HMM E-Value=0) 52 4e-07
SB_718| Best HMM Match : RhoGAP (HMM E-Value=0) 52 5e-07
SB_19750| Best HMM Match : RhoGAP (HMM E-Value=8.4e-34) 51 9e-07
SB_19709| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 5e-06
SB_45475| Best HMM Match : RhoGAP (HMM E-Value=1.26117e-44) 46 4e-05
SB_43333| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_16463| Best HMM Match : RhoGAP (HMM E-Value=5.7e-25) 42 4e-04
SB_38980| Best HMM Match : RhoGAP (HMM E-Value=0) 42 5e-04
SB_42987| Best HMM Match : RhoGAP (HMM E-Value=2.7e-26) 41 0.001
SB_48713| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_4894| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_42552| Best HMM Match : RhoGAP (HMM E-Value=0) 40 0.003
SB_22677| Best HMM Match : RhoGAP (HMM E-Value=9.4e-13) 39 0.004
SB_12981| Best HMM Match : RhoGAP (HMM E-Value=0) 39 0.004
SB_40773| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_31303| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_42550| Best HMM Match : RhoGAP (HMM E-Value=0) 33 0.24
SB_7782| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.42
SB_38582| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.56
SB_30637| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.97
SB_36803| Best HMM Match : RhoGAP (HMM E-Value=0) 30 1.7
SB_10519| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_13885| Best HMM Match : 7tm_1 (HMM E-Value=3.7e-06) 29 3.9
SB_9412| Best HMM Match : Peptidase_M1 (HMM E-Value=3.1e-07) 29 3.9
SB_34021| Best HMM Match : Zip (HMM E-Value=0) 28 9.1
SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.1
SB_20385| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.1
>SB_43370| Best HMM Match : RhoGAP (HMM E-Value=1.6e-18)
Length = 865
Score = 59.3 bits (137), Expect = 3e-09
Identities = 30/84 (35%), Positives = 49/84 (58%)
Frame = +3
Query: 3 YTEGLYRKSGLSSKVXXXXXXXXXXXXXGVEKLDSYAVHVRASVLKSFFRELPEPLLTFD 182
Y EG+YRKS + V ++ L S+ VHV A+VLK FFR+L P+ T D
Sbjct: 670 YAEGIYRKSPSAVAVRALKNAIVSSGISDLD-LSSHVVHVVAAVLKLFFRQLSSPVFTDD 728
Query: 183 LYDDFILAAQISDPQERVSSIFTI 254
+Y++ I A +SD +E++ +++ +
Sbjct: 729 VYNEVIRTADLSDEREQLETLYAL 752
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +2
Query: 254 IKKLPKPNFDLVERLIFHLAR 316
++KLP N ERL+FHLAR
Sbjct: 753 VQKLPPANRATFERLVFHLAR 773
>SB_48764| Best HMM Match : RhoGAP (HMM E-Value=0)
Length = 583
Score = 58.4 bits (135), Expect = 6e-09
Identities = 34/82 (41%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Frame = +3
Query: 9 EGLYRKSGLSSKVXXXXXXXXXXXXXGVEKLDSYA---VHVRASVLKSFFRELPEPLLTF 179
+G+YR SG SS + ++ D Y VH +S+LK +FRELP PLLT+
Sbjct: 38 DGIYRLSGSSSIIQKLRFLFDGDEPPELD--DEYYLRDVHCISSLLKMYFRELPNPLLTY 95
Query: 180 DLYDDFILAAQISDPQERVSSI 245
LYD F+ A QI+D +ER +I
Sbjct: 96 SLYDKFVSAIQITDEKERKVAI 117
Score = 41.1 bits (92), Expect = 0.001
Identities = 22/71 (30%), Positives = 39/71 (54%)
Frame = +2
Query: 254 IKKLPKPNFDLVERLIFHLARVALQEEHNRMGPNALAIVFAPCILRTHKVQPAQDSLHDI 433
+++LP P++ +E L+ HLA+VA M LAIV+AP +L+ + +L +I
Sbjct: 121 VQQLPPPHYRTLEYLLQHLAKVASHAGQTAMHAKNLAIVWAPNLLKPRSQEYGSTALLEI 180
Query: 434 ARQTACLEAIL 466
Q +E ++
Sbjct: 181 NVQAIIVEYLI 191
>SB_31002| Best HMM Match : RhoGAP (HMM E-Value=0)
Length = 1250
Score = 52.4 bits (120), Expect = 4e-07
Identities = 32/74 (43%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Frame = +3
Query: 3 YTEGLYRKSGLSSKVXXXXXXXXXXXXXGVEKLDSYAV--HVRASVLKSFFRELPEPLLT 176
+ +G+YR SG+ S+V G E +D V HV A+VLK + R+LPEPLLT
Sbjct: 279 HVKGIYRVSGVKSRVEKLCQAFEN----GAELVDLSTVPPHVIAAVLKLYLRQLPEPLLT 334
Query: 177 FDLYDDFILAAQIS 218
F LY +FI A+ S
Sbjct: 335 FKLYPEFIKLAKES 348
Score = 47.2 bits (107), Expect = 1e-05
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Frame = +2
Query: 254 IKKLPKPNFDLVERLIFHLARVALQEEHNRMGPNALAIVFAPCILRTHKVQPA----QDS 421
+ KLPK NF ++I HL VA E+ N M + L IVF P +LR + + +
Sbjct: 382 VVKLPKANFKTAAKIIEHLHLVAANEDENSMSGSNLGIVFGPTLLRPRESASSDSVNMSA 441
Query: 422 LHDIARQTACLEAILVDKMRTIRG 493
L D+ QT +E +L+ ++ I G
Sbjct: 442 LMDMPLQTRTVE-LLITNIQDISG 464
>SB_718| Best HMM Match : RhoGAP (HMM E-Value=0)
Length = 598
Score = 52.0 bits (119), Expect = 5e-07
Identities = 26/84 (30%), Positives = 43/84 (51%)
Frame = +3
Query: 12 GLYRKSGLSSKVXXXXXXXXXXXXXGVEKLDSYAVHVRASVLKSFFRELPEPLLTFDLYD 191
G+YR SG SS V + + +H A + K + R+LPEPL T +LYD
Sbjct: 364 GIYRLSGASSDVKRLKEGFDENSQSALVLVSEADIHAVAGLFKMYLRDLPEPLFTDELYD 423
Query: 192 DFILAAQISDPQERVSSIFTI*RN 263
F+ A ++D +E+ ++ + R+
Sbjct: 424 KFVKAYAMADAEEKRETMLELFRS 447
Score = 37.1 bits (82), Expect = 0.015
Identities = 24/63 (38%), Positives = 33/63 (52%)
Frame = +2
Query: 257 KKLPKPNFDLVERLIFHLARVALQEEHNRMGPNALAIVFAPCILRTHKVQPAQDSLHDIA 436
+ LP PN L HL +VA + E ++MG N L+ VF P +LR P S D+A
Sbjct: 446 RSLPTPNRLTACYLFQHLRKVAEKSEVHKMGLNNLSTVFGPNVLRP---SPKTSSPMDLA 502
Query: 437 RQT 445
+ T
Sbjct: 503 QGT 505
>SB_19750| Best HMM Match : RhoGAP (HMM E-Value=8.4e-34)
Length = 128
Score = 51.2 bits (117), Expect = 9e-07
Identities = 25/74 (33%), Positives = 38/74 (51%)
Frame = +3
Query: 12 GLYRKSGLSSKVXXXXXXXXXXXXXGVEKLDSYAVHVRASVLKSFFRELPEPLLTFDLYD 191
G+YR SG SS V + + +H A + K + R+LPEPL T +LYD
Sbjct: 27 GIYRLSGASSDVKRLKEGFDENSQSALVLVSEADIHAVAGLFKMYLRDLPEPLFTDELYD 86
Query: 192 DFILAAQISDPQER 233
F+ A ++D +E+
Sbjct: 87 KFVKAYAMADAEEK 100
>SB_19709| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 613
Score = 48.8 bits (111), Expect = 5e-06
Identities = 23/44 (52%), Positives = 29/44 (65%)
Frame = +3
Query: 114 VHVRASVLKSFFRELPEPLLTFDLYDDFILAAQISDPQERVSSI 245
VH VLK + RELPEPL+TF LYDD+I AA++ R+ I
Sbjct: 304 VHAITGVLKQYLRELPEPLMTFALYDDWIQAARLCVITRRLPDI 347
Score = 31.1 bits (67), Expect = 0.97
Identities = 18/57 (31%), Positives = 32/57 (56%)
Frame = +2
Query: 296 LIFHLARVALQEEHNRMGPNALAIVFAPCILRTHKVQPAQDSLHDIARQTACLEAIL 466
LI L ++A E N+M + +AIV AP I+ + + +LH Q++ +EA++
Sbjct: 394 LICFLGKLADYSEVNKMTASNIAIVIAPNIIYSEQDTSDAINLHHTGVQSSIVEALI 450
>SB_45475| Best HMM Match : RhoGAP (HMM E-Value=1.26117e-44)
Length = 552
Score = 45.6 bits (103), Expect = 4e-05
Identities = 28/83 (33%), Positives = 40/83 (48%)
Frame = +3
Query: 6 TEGLYRKSGLSSKVXXXXXXXXXXXXXGVEKLDSYAVHVRASVLKSFFRELPEPLLTFDL 185
TEGL+RKSG + E++ + H A ++K FFR+L EPLLT
Sbjct: 210 TEGLFRKSGSVQRQKLLKERIELG-----EEISTAQPHDVAGLMKQFFRQLQEPLLTNTY 264
Query: 186 YDDFILAAQISDPQERVSSIFTI 254
+D FI +I D R ++ I
Sbjct: 265 HDSFIKTMRIEDDNTRTKAMLYI 287
Score = 28.7 bits (61), Expect = 5.2
Identities = 18/74 (24%), Positives = 34/74 (45%)
Frame = +2
Query: 245 IYNIKKLPKPNFDLVERLIFHLARVALQEEHNRMGPNALAIVFAPCILRTHKVQPAQDSL 424
+Y LP + ++ + LA A E ++MG + LAIV P ++ + + S
Sbjct: 285 LYICLLLPLAHLQALKYTMKFLAEFASHSEKSKMGFSNLAIVLTPNLMHNIRKDNSSSSE 344
Query: 425 HDIARQTACLEAIL 466
+ QT ++ +L
Sbjct: 345 RLLKDQTVVIKTLL 358
>SB_43333| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 453
Score = 42.7 bits (96), Expect = 3e-04
Identities = 23/61 (37%), Positives = 32/61 (52%)
Frame = +3
Query: 9 EGLYRKSGLSSKVXXXXXXXXXXXXXGVEKLDSYAVHVRASVLKSFFRELPEPLLTFDLY 188
EG++R+S S V +L VH A+++K F RELPEPLLT++L
Sbjct: 290 EGIFRRSANSQMVKQVTVMFNQGTPVDYTELGD--VHCAAAIIKKFLRELPEPLLTYELC 347
Query: 189 D 191
D
Sbjct: 348 D 348
Score = 29.1 bits (62), Expect = 3.9
Identities = 21/65 (32%), Positives = 33/65 (50%)
Frame = +2
Query: 260 KLPKPNFDLVERLIFHLARVALQEEHNRMGPNALAIVFAPCILRTHKVQPAQDSLHDIAR 439
+LP NF L++ ++ L V Q N+M + LAIVF P ++ + D++ I
Sbjct: 373 RLPAENFALLKFIMEFLQEVQ-QHPANKMTASNLAIVFGPNLIWGRTAASSLDAMAQINT 431
Query: 440 QTACL 454
T CL
Sbjct: 432 FT-CL 435
>SB_16463| Best HMM Match : RhoGAP (HMM E-Value=5.7e-25)
Length = 252
Score = 42.3 bits (95), Expect = 4e-04
Identities = 19/39 (48%), Positives = 28/39 (71%)
Frame = +3
Query: 129 SVLKSFFRELPEPLLTFDLYDDFILAAQISDPQERVSSI 245
S+LK F R+LPE L+T +LY+ FI A + DP ER+ ++
Sbjct: 44 SLLKQFLRKLPEGLVTAELYESFIEANRKDDPVERMGAL 82
>SB_38980| Best HMM Match : RhoGAP (HMM E-Value=0)
Length = 367
Score = 41.9 bits (94), Expect = 5e-04
Identities = 20/46 (43%), Positives = 29/46 (63%)
Frame = +2
Query: 254 IKKLPKPNFDLVERLIFHLARVALQEEHNRMGPNALAIVFAPCILR 391
+ KLP N++L++ L L V++ EE+N+M ALAIVF P R
Sbjct: 292 LDKLPYLNYELLKFLCHFLVEVSMNEENNKMSTMALAIVFGPNFFR 337
Score = 34.7 bits (76), Expect = 0.079
Identities = 24/69 (34%), Positives = 32/69 (46%)
Frame = +3
Query: 9 EGLYRKSGLSSKVXXXXXXXXXXXXXGVEKLDSYAVHVRASVLKSFFRELPEPLLTFDLY 188
EG++R SG V +E+ D AV A +LK F RELPEP + L
Sbjct: 211 EGIFRVSGNHKVVESLKATFDRDGDADLEECDVMAV---AGLLKLFLRELPEPPVPQALT 267
Query: 189 DDFILAAQI 215
DFI ++
Sbjct: 268 TDFIKVHEV 276
>SB_42987| Best HMM Match : RhoGAP (HMM E-Value=2.7e-26)
Length = 139
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +3
Query: 114 VHVRASVLKSFFRELPEPLLTFDLYDDFILAAQISDPQERVSSI 245
++ V K +FR+LP PL+TF+ Y FI AA+ D R+ +
Sbjct: 13 INTITGVCKLYFRQLPLPLITFETYSKFIAAAKTQDKHLRIEEL 56
Score = 38.3 bits (85), Expect = 0.006
Identities = 21/69 (30%), Positives = 40/69 (57%)
Frame = +2
Query: 260 KLPKPNFDLVERLIFHLARVALQEEHNRMGPNALAIVFAPCILRTHKVQPAQDSLHDIAR 439
+LP+ +++ ++ L+ HL RV+ + N M L+IVF P ++R + + DSL D+
Sbjct: 62 ELPQAHYETMKFLMGHLHRVSQRRSKNMMTEENLSIVFGPTLMRAPE-GDSLDSLVDMKF 120
Query: 440 QTACLEAIL 466
Q +E ++
Sbjct: 121 QRLAVELLI 129
>SB_48713| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 663
Score = 40.3 bits (90), Expect = 0.002
Identities = 19/45 (42%), Positives = 28/45 (62%)
Frame = +3
Query: 99 LDSYAVHVRASVLKSFFRELPEPLLTFDLYDDFILAAQISDPQER 233
LD Y+V+ LK + RELPEP++ +LY FI ++ DP+ R
Sbjct: 28 LDDYSVNEVTGTLKKYLRELPEPVIPSNLYQRFIEVSR-KDPRSR 71
>SB_4894| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 486
Score = 40.3 bits (90), Expect = 0.002
Identities = 27/76 (35%), Positives = 36/76 (47%)
Frame = +3
Query: 9 EGLYRKSGLSSKVXXXXXXXXXXXXXGVEKLDSYAVHVRASVLKSFFRELPEPLLTFDLY 188
EG+YR SG+ SKV L Y V AS++K + RELPE +LT L
Sbjct: 137 EGIYRVSGVKSKVDALKELYDQGKQV---DLKEYEPEVVASIVKQYLRELPESVLTMMLA 193
Query: 189 DDFILAAQISDPQERV 236
F I D +E++
Sbjct: 194 PRFNELIGIQDKKEQL 209
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +2
Query: 254 IKKLPKPNFDLVERLIFHLARVALQEEHNRMGPNALAIVFAPCILRTHKV 403
+ +LP PN L+ + H+ V + N+M ++IV P + +H V
Sbjct: 216 LAELPSPNRTLLAWTMVHMGHVIDKASENKMSLQNISIVLNPTMSISHGV 265
>SB_42552| Best HMM Match : RhoGAP (HMM E-Value=0)
Length = 945
Score = 39.5 bits (88), Expect = 0.003
Identities = 17/43 (39%), Positives = 27/43 (62%)
Frame = +3
Query: 117 HVRASVLKSFFRELPEPLLTFDLYDDFILAAQISDPQERVSSI 245
H A++ K + R+LPEPLLT +LY F+ ISD + + ++
Sbjct: 459 HDVAALFKEYLRDLPEPLLTRELYSAFLETQGISDTAKEIEAL 501
>SB_22677| Best HMM Match : RhoGAP (HMM E-Value=9.4e-13)
Length = 499
Score = 39.1 bits (87), Expect = 0.004
Identities = 16/31 (51%), Positives = 21/31 (67%)
Frame = +3
Query: 114 VHVRASVLKSFFRELPEPLLTFDLYDDFILA 206
VH A LK +FRE+PEPL+ FD + F+ A
Sbjct: 411 VHALAGSLKLYFREMPEPLVPFDFFSGFVEA 441
>SB_12981| Best HMM Match : RhoGAP (HMM E-Value=0)
Length = 251
Score = 39.1 bits (87), Expect = 0.004
Identities = 16/31 (51%), Positives = 21/31 (67%)
Frame = +3
Query: 114 VHVRASVLKSFFRELPEPLLTFDLYDDFILA 206
VH A LK +FRE+PEPL+ FD + F+ A
Sbjct: 107 VHALAGSLKLYFREMPEPLVPFDFFSGFVEA 137
Score = 37.1 bits (82), Expect = 0.015
Identities = 19/46 (41%), Positives = 29/46 (63%)
Frame = +2
Query: 254 IKKLPKPNFDLVERLIFHLARVALQEEHNRMGPNALAIVFAPCILR 391
+ +LP+ NFD ++ L+ HL +V E NRM LAIV+ P ++R
Sbjct: 175 VGQLPRINFDTLKLLLGHLHKVMGFSEVNRMHAQNLAIVWGPNMMR 220
>SB_40773| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 953
Score = 37.9 bits (84), Expect = 0.008
Identities = 19/40 (47%), Positives = 24/40 (60%)
Frame = +3
Query: 108 YAVHVRASVLKSFFRELPEPLLTFDLYDDFILAAQISDPQ 227
+ H ASVLK F ELPEPLLT Y ++ +IS+ Q
Sbjct: 107 FTAHDVASVLKQFLGELPEPLLTQAPYRAYLQVTEISNDQ 146
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +2
Query: 263 LPKPNFDLVERLIFHLARVALQEEHNRMGPNALAIVFAPCILRTHK 400
+P N L+ L+ L ++ L+ +N+M LA+VF P +L +K
Sbjct: 162 IPPENRSLLHNLL-ELLKLVLENPNNKMTAYNLAVVFCPNVLYCNK 206
>SB_31303| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 374
Score = 37.9 bits (84), Expect = 0.008
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = +3
Query: 93 EKLDSYAVHVRASVLKSFFRELPEPLLTFDLYDDFILAAQ 212
E D +H AS+LK + REL EP++ +D ++ F+ AA+
Sbjct: 162 ELSDEKDIHTVASLLKLYLRELSEPVIPYDFFEVFLTAAK 201
>SB_42550| Best HMM Match : RhoGAP (HMM E-Value=0)
Length = 790
Score = 33.1 bits (72), Expect = 0.24
Identities = 18/63 (28%), Positives = 31/63 (49%)
Frame = +3
Query: 12 GLYRKSGLSSKVXXXXXXXXXXXXXGVEKLDSYAVHVRASVLKSFFRELPEPLLTFDLYD 191
G++RKSG ++ + + + A +LK +FR+LP+P+LT L +
Sbjct: 336 GIFRKSGGKQRINNLKDMMEDNPEH--TDFEGMSPYDLADMLKQYFRDLPDPILTSKLAE 393
Query: 192 DFI 200
FI
Sbjct: 394 TFI 396
>SB_7782| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 539
Score = 32.3 bits (70), Expect = 0.42
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = +3
Query: 9 EGLYRKSGLSSKVXXXXXXXXXXXXXGVEKLDSYAVHVRASVLKSFFRELPEPLLTFDLY 188
EG+YRKSG + L+ VH LK F + LPEPL+ +L
Sbjct: 290 EGIYRKSGKIEDIRTIQNSFDEKRDADFSALEMN-VHAVTGALKKFLKLLPEPLIPNNLQ 348
Query: 189 DDFI 200
++ +
Sbjct: 349 NNIL 352
>SB_38582| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1438
Score = 31.9 bits (69), Expect = 0.56
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +3
Query: 129 SVLKSFFRELPEPLLTFDLYDDFILAAQISDPQERVSSIFTI*RN 263
S+ + F R LP+ +L + YDD + I + ER I I N
Sbjct: 739 SLFQEFLRRLPDCILDSEYYDDLVATNNIENDAERAQQIKLILEN 783
>SB_30637| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1137
Score = 31.1 bits (67), Expect = 0.97
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +3
Query: 117 HVRASVLKSFFRELPEPLLTFDLYDDFI 200
H A+VLK +F+ELP L T + Y FI
Sbjct: 285 HCIATVLKMYFQELPTSLFTEEKYSTFI 312
>SB_36803| Best HMM Match : RhoGAP (HMM E-Value=0)
Length = 1277
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +3
Query: 114 VHVRASVLKSFFRELPEPLLTFDLYDDFILAAQ 212
++V +LK + RELPEPL+T + + AA+
Sbjct: 999 INVITGILKDYLRELPEPLITEKMTEGLRKAAK 1031
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +2
Query: 263 LPKPNFDLVERLIFHLARVALQEEHNRMGPNALAIVFAP 379
LP PN + ++ HL V ++E N+M L++ AP
Sbjct: 1053 LPDPNRHTLVFILNHLRHVMEKKEFNKMDARNLSVCLAP 1091
>SB_10519| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 873
Score = 30.3 bits (65), Expect = 1.7
Identities = 21/76 (27%), Positives = 35/76 (46%)
Frame = +2
Query: 164 AAAHLRSLRRLHPGCSDIRSPGASFVNIYNIKKLPKPNFDLVERLIFHLARVALQEEHNR 343
A + ++ +R C +S + ++L K N +V R RV+ E N+
Sbjct: 593 ARSLVKKMRVFFFSCRRFKSSSCELRTLSTTERLEKLNRVIVFR------RVSEHSEQNK 646
Query: 344 MGPNALAIVFAPCILR 391
M + LA+VF P +LR
Sbjct: 647 MDAHNLAVVFGPTLLR 662
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = +3
Query: 114 VHVRASVLKSFFRELPEPLLTFDLYDDFILAAQISDPQERVSSI 245
++ A +L+ +FREL +PL Y FI A++ ++ + +
Sbjct: 519 INAVAGLLRVYFRELEDPLFPSSHYQQFIEASRFPTNEDVIRQV 562
>SB_13885| Best HMM Match : 7tm_1 (HMM E-Value=3.7e-06)
Length = 418
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/44 (34%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = -3
Query: 483 VRILSTRMASRQAV-WRAMSCSESCAGCTLCVRRMHGANTIAKA 355
V++LS +AS++ R + C++ C+ CTL + + +NT+ KA
Sbjct: 82 VQLLSDLLASKEYKNIRGILCTQECSNCTLSI---NTSNTVTKA 122
>SB_9412| Best HMM Match : Peptidase_M1 (HMM E-Value=3.1e-07)
Length = 1844
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = +1
Query: 487 PRRAAGPATLETAAHT--ASNRLSTLRSTSAPQRHEEHI 597
PR+ AGP+ +TA+ + A+NR + +S P + E +I
Sbjct: 510 PRKCAGPSVCQTASSSDVANNRPEYISRSSTPTKSETNI 548
>SB_34021| Best HMM Match : Zip (HMM E-Value=0)
Length = 808
Score = 27.9 bits (59), Expect = 9.1
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = +3
Query: 594 HPRRTHQRHREGEGHTYQRSANSHQSH 674
H H E GH+++ +SH++H
Sbjct: 315 HSHENHGHSHENHGHSHENHGHSHENH 341
>SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1212
Score = 27.9 bits (59), Expect = 9.1
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +1
Query: 442 DRLPRGHPRRQDANHPRRAAGPATLETAA-HTASNRLSTLRSTSAPQRHEEH 594
D LP+ P+ + P+R PA +T+A S +L STS P E+H
Sbjct: 829 DPLPQKAPKPRRPPPPKRPERPALPKTSALANKSGQLPRAVSTSKPAGKEKH 880
>SB_20385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 603
Score = 27.9 bits (59), Expect = 9.1
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +2
Query: 197 HPGCSDIRSPGASFVNIYNIKKLPKPNFDLVERLIFHLARVALQEEHNRM 346
H S +R PGA V N K P L + L+ HL + Q+E +M
Sbjct: 104 HETDSSVRQPGALAVGEPNHKSEPCQVTQLRQLLLLHLELIQQQQEQLQM 153
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.315 0.128 0.390
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,856,264
Number of Sequences: 59808
Number of extensions: 282391
Number of successful extensions: 1248
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1246
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1986074805
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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