Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021785
(737 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067217-2|AAF99977.1| 1887|Caenorhabditis elegans Heavy chain, ... 88 5e-18
Z46812-6|CAA86848.2| 546|Caenorhabditis elegans Hypothetical pr... 51 1e-06
Z46812-5|CAA86847.2| 775|Caenorhabditis elegans Hypothetical pr... 51 1e-06
Z37093-8|CAA85469.2| 546|Caenorhabditis elegans Hypothetical pr... 51 1e-06
Z37093-7|CAA85468.2| 775|Caenorhabditis elegans Hypothetical pr... 51 1e-06
U80955-10|AAN65297.2| 475|Caenorhabditis elegans Hypothetical p... 48 7e-06
U80955-9|AAN65296.1| 863|Caenorhabditis elegans Hypothetical pr... 48 7e-06
U80955-8|AAN65295.1| 881|Caenorhabditis elegans Hypothetical pr... 48 7e-06
Z34800-3|CAA84322.2| 722|Caenorhabditis elegans Hypothetical pr... 46 3e-05
Z34800-2|CAA84324.2| 842|Caenorhabditis elegans Hypothetical pr... 46 3e-05
Z49888-4|CAH60776.1| 742|Caenorhabditis elegans Hypothetical pr... 43 3e-04
Z49888-3|CAA90063.2| 759|Caenorhabditis elegans Hypothetical pr... 43 3e-04
AC024755-8|AAF59636.2| 604|Caenorhabditis elegans Hypothetical ... 43 3e-04
U02289-1|AAA18934.1| 1439|Caenorhabditis elegans GTPase-activati... 42 3e-04
L16687-1|AAK71357.2| 1317|Caenorhabditis elegans Hypothetical pr... 42 3e-04
Z46241-4|CAA86318.1| 837|Caenorhabditis elegans Hypothetical pr... 38 0.006
Z93384-3|CAB07634.3| 1341|Caenorhabditis elegans Hypothetical pr... 35 0.052
Z93384-2|CAE54901.1| 1320|Caenorhabditis elegans Hypothetical pr... 35 0.052
Z73425-7|CAA97790.1| 1059|Caenorhabditis elegans Hypothetical pr... 35 0.052
Z66521-14|CAI70416.1| 245|Caenorhabditis elegans Hypothetical p... 35 0.052
Z66521-13|CAA91403.1| 444|Caenorhabditis elegans Hypothetical p... 35 0.052
Z81568-11|CAB04593.1| 681|Caenorhabditis elegans Hypothetical p... 34 0.12
U97192-1|AAB52434.2| 986|Caenorhabditis elegans Hypothetical pr... 33 0.16
U28741-7|AAO38645.1| 721|Caenorhabditis elegans Synapse defecti... 33 0.28
U28741-6|AAO21428.1| 942|Caenorhabditis elegans Synapse defecti... 33 0.28
U28741-5|AAO38644.1| 987|Caenorhabditis elegans Synapse defecti... 33 0.28
AF546880-1|AAN38752.1| 942|Caenorhabditis elegans axon identity... 33 0.28
U97192-2|AAO38678.1| 622|Caenorhabditis elegans Hypothetical pr... 30 2.0
AC092690-1|AAK73856.2| 427|Caenorhabditis elegans Hypothetical ... 29 3.4
Z81130-4|CAB03414.2| 512|Caenorhabditis elegans Hypothetical pr... 28 6.0
AL033536-1|CAA22138.1| 908|Caenorhabditis elegans Hypothetical ... 28 6.0
AC084268-3|AAK19005.5| 397|Caenorhabditis elegans Hypothetical ... 28 6.0
>AF067217-2|AAF99977.1| 1887|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 7 protein.
Length = 1887
Score = 88.2 bits (209), Expect = 5e-18
Identities = 37/85 (43%), Positives = 61/85 (71%)
Frame = +2
Query: 254 IKKLPKPNFDLVERLIFHLARVALQEEHNRMGPNALAIVFAPCILRTHKVQPAQDSLHDI 433
I+ LPKPN +++RL++HLARVA QE N+MG N LA++F PC+LR AQ+ L+D+
Sbjct: 1662 IELLPKPNRAVLDRLMYHLARVADQEAVNKMGCNNLALIFGPCVLRRQDSAHAQEQLNDV 1721
Query: 434 ARQTACLEAILVDKMRTIRGVLQDL 508
ARQT C++ ++ +K++ + + ++
Sbjct: 1722 ARQTGCVQTLIEEKLKQYKATIHNI 1746
Score = 62.5 bits (145), Expect = 3e-10
Identities = 29/78 (37%), Positives = 45/78 (57%)
Frame = +3
Query: 3 YTEGLYRKSGLSSKVXXXXXXXXXXXXXGVEKLDSYAVHVRASVLKSFFRELPEPLLTFD 182
+ EG+YRKSG +V L+ VHV +++K+FFREL EP++ FD
Sbjct: 1578 FVEGVYRKSGSLPQVRSIRKVIESTADADSVNLEDIGVHVLTTLVKAFFRELAEPIIIFD 1637
Query: 183 LYDDFILAAQISDPQERV 236
LY++F+ +++ D ERV
Sbjct: 1638 LYENFLNVSEVEDMGERV 1655
>Z46812-6|CAA86848.2| 546|Caenorhabditis elegans Hypothetical
protein ZK669.1b protein.
Length = 546
Score = 50.8 bits (116), Expect = 1e-06
Identities = 26/64 (40%), Positives = 36/64 (56%)
Frame = +3
Query: 9 EGLYRKSGLSSKVXXXXXXXXXXXXXGVEKLDSYAVHVRASVLKSFFRELPEPLLTFDLY 188
+G+YR G+ SK+ LD+ ASV+K + R+LPEPLLTF+LY
Sbjct: 211 KGIYRTCGVKSKIEEICNAFERSSSDDEVCLDNENPMNLASVVKLYLRKLPEPLLTFELY 270
Query: 189 DDFI 200
DDF+
Sbjct: 271 DDFV 274
Score = 33.1 bits (72), Expect = 0.21
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +2
Query: 257 KKLPKPNFDLVERLIFHLARVALQEEHNRMGPNALAIVFAPCIL 388
+KLP N++ ++ ++ HL RV+ E N M + L+ V AP ++
Sbjct: 303 RKLPVHNYETLKFIMLHLNRVSWFHEVNLMSTSNLSTVIAPSLI 346
>Z46812-5|CAA86847.2| 775|Caenorhabditis elegans Hypothetical
protein ZK669.1a protein.
Length = 775
Score = 50.8 bits (116), Expect = 1e-06
Identities = 26/64 (40%), Positives = 36/64 (56%)
Frame = +3
Query: 9 EGLYRKSGLSSKVXXXXXXXXXXXXXGVEKLDSYAVHVRASVLKSFFRELPEPLLTFDLY 188
+G+YR G+ SK+ LD+ ASV+K + R+LPEPLLTF+LY
Sbjct: 440 KGIYRTCGVKSKIEEICNAFERSSSDDEVCLDNENPMNLASVVKLYLRKLPEPLLTFELY 499
Query: 189 DDFI 200
DDF+
Sbjct: 500 DDFV 503
Score = 33.1 bits (72), Expect = 0.21
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +2
Query: 257 KKLPKPNFDLVERLIFHLARVALQEEHNRMGPNALAIVFAPCIL 388
+KLP N++ ++ ++ HL RV+ E N M + L+ V AP ++
Sbjct: 532 RKLPVHNYETLKFIMLHLNRVSWFHEVNLMSTSNLSTVIAPSLI 575
>Z37093-8|CAA85469.2| 546|Caenorhabditis elegans Hypothetical
protein ZK669.1b protein.
Length = 546
Score = 50.8 bits (116), Expect = 1e-06
Identities = 26/64 (40%), Positives = 36/64 (56%)
Frame = +3
Query: 9 EGLYRKSGLSSKVXXXXXXXXXXXXXGVEKLDSYAVHVRASVLKSFFRELPEPLLTFDLY 188
+G+YR G+ SK+ LD+ ASV+K + R+LPEPLLTF+LY
Sbjct: 211 KGIYRTCGVKSKIEEICNAFERSSSDDEVCLDNENPMNLASVVKLYLRKLPEPLLTFELY 270
Query: 189 DDFI 200
DDF+
Sbjct: 271 DDFV 274
Score = 33.1 bits (72), Expect = 0.21
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +2
Query: 257 KKLPKPNFDLVERLIFHLARVALQEEHNRMGPNALAIVFAPCIL 388
+KLP N++ ++ ++ HL RV+ E N M + L+ V AP ++
Sbjct: 303 RKLPVHNYETLKFIMLHLNRVSWFHEVNLMSTSNLSTVIAPSLI 346
>Z37093-7|CAA85468.2| 775|Caenorhabditis elegans Hypothetical
protein ZK669.1a protein.
Length = 775
Score = 50.8 bits (116), Expect = 1e-06
Identities = 26/64 (40%), Positives = 36/64 (56%)
Frame = +3
Query: 9 EGLYRKSGLSSKVXXXXXXXXXXXXXGVEKLDSYAVHVRASVLKSFFRELPEPLLTFDLY 188
+G+YR G+ SK+ LD+ ASV+K + R+LPEPLLTF+LY
Sbjct: 440 KGIYRTCGVKSKIEEICNAFERSSSDDEVCLDNENPMNLASVVKLYLRKLPEPLLTFELY 499
Query: 189 DDFI 200
DDF+
Sbjct: 500 DDFV 503
Score = 33.1 bits (72), Expect = 0.21
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +2
Query: 257 KKLPKPNFDLVERLIFHLARVALQEEHNRMGPNALAIVFAPCIL 388
+KLP N++ ++ ++ HL RV+ E N M + L+ V AP ++
Sbjct: 532 RKLPVHNYETLKFIMLHLNRVSWFHEVNLMSTSNLSTVIAPSLI 575
>U80955-10|AAN65297.2| 475|Caenorhabditis elegans Hypothetical
protein T04C9.1c protein.
Length = 475
Score = 48.0 bits (109), Expect = 7e-06
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Frame = +3
Query: 3 YTEGLYRKSGLSSKVXXXXXXXXXXXXXGVE-----KLDSYAVHVRASVLKSFFRELPEP 167
+ +G+YR G++SKV + + D + +S +K+F R LPEP
Sbjct: 86 HEQGVYRNCGVTSKVQKMMMLGLDRRKASEKGGLNLRDDEWETKTISSAVKTFLRNLPEP 145
Query: 168 LLTFDLYDDFILAAQISDPQERVSSI 245
L+TF+L++ FI AA++ D R+ I
Sbjct: 146 LMTFELHNVFINAAKMGDATMRIDHI 171
Score = 31.9 bits (69), Expect = 0.49
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +2
Query: 248 YNIKKLPKPNFDLVERLIFHLARVALQEEHNRMGPNALAIVFAPCILR 391
+ + +LP + ++E ++ HL RVA N M + L + F P +LR
Sbjct: 173 FYVHQLPAQHLRMLEIVVRHLKRVADLSNENLMTVSNLGVCFGPTLLR 220
>U80955-9|AAN65296.1| 863|Caenorhabditis elegans Hypothetical
protein T04C9.1b protein.
Length = 863
Score = 48.0 bits (109), Expect = 7e-06
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Frame = +3
Query: 3 YTEGLYRKSGLSSKVXXXXXXXXXXXXXGVE-----KLDSYAVHVRASVLKSFFRELPEP 167
+ +G+YR G++SKV + + D + +S +K+F R LPEP
Sbjct: 426 HEQGVYRNCGVTSKVQKMMMLGLDRRKASEKGGLNLRDDEWETKTISSAVKTFLRNLPEP 485
Query: 168 LLTFDLYDDFILAAQISDPQERVSSI 245
L+TF+L++ FI AA++ D R+ I
Sbjct: 486 LMTFELHNVFINAAKMGDATMRIDHI 511
Score = 31.9 bits (69), Expect = 0.49
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +2
Query: 248 YNIKKLPKPNFDLVERLIFHLARVALQEEHNRMGPNALAIVFAPCILR 391
+ + +LP + ++E ++ HL RVA N M + L + F P +LR
Sbjct: 513 FYVHQLPAQHLRMLEIVVRHLKRVADLSNENLMTVSNLGVCFGPTLLR 560
>U80955-8|AAN65295.1| 881|Caenorhabditis elegans Hypothetical
protein T04C9.1a protein.
Length = 881
Score = 48.0 bits (109), Expect = 7e-06
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Frame = +3
Query: 3 YTEGLYRKSGLSSKVXXXXXXXXXXXXXGVE-----KLDSYAVHVRASVLKSFFRELPEP 167
+ +G+YR G++SKV + + D + +S +K+F R LPEP
Sbjct: 426 HEQGVYRNCGVTSKVQKMMMLGLDRRKASEKGGLNLRDDEWETKTISSAVKTFLRNLPEP 485
Query: 168 LLTFDLYDDFILAAQISDPQERVSSI 245
L+TF+L++ FI AA++ D R+ I
Sbjct: 486 LMTFELHNVFINAAKMGDATMRIDHI 511
Score = 31.9 bits (69), Expect = 0.49
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +2
Query: 248 YNIKKLPKPNFDLVERLIFHLARVALQEEHNRMGPNALAIVFAPCILR 391
+ + +LP + ++E ++ HL RVA N M + L + F P +LR
Sbjct: 513 FYVHQLPAQHLRMLEIVVRHLKRVADLSNENLMTVSNLGVCFGPTLLR 560
>Z34800-3|CAA84322.2| 722|Caenorhabditis elegans Hypothetical
protein F45H7.2b protein.
Length = 722
Score = 46.0 bits (104), Expect = 3e-05
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Frame = +3
Query: 6 TEGLYRKSGLSSKVXXXXXXXXXXXXX-----GVEKLDSYAVHVRASVLKSFFRELPEPL 170
T G++RK+G+ S++ G LDS VH A +LK +FR+LPEPL
Sbjct: 301 TVGIFRKNGVKSRIAELRSIIESYSGNTDVFVGENLLDSTQVHDVADLLKQYFRDLPEPL 360
Query: 171 LTFDLYDDFILAAQISDPQERVSSI 245
+T + + F + ER++++
Sbjct: 361 MTVKMSEVFANICSVVPDVERITAL 385
>Z34800-2|CAA84324.2| 842|Caenorhabditis elegans Hypothetical
protein F45H7.2a protein.
Length = 842
Score = 46.0 bits (104), Expect = 3e-05
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Frame = +3
Query: 6 TEGLYRKSGLSSKVXXXXXXXXXXXXX-----GVEKLDSYAVHVRASVLKSFFRELPEPL 170
T G++RK+G+ S++ G LDS VH A +LK +FR+LPEPL
Sbjct: 421 TVGIFRKNGVKSRIAELRSIIESYSGNTDVFVGENLLDSTQVHDVADLLKQYFRDLPEPL 480
Query: 171 LTFDLYDDFILAAQISDPQERVSSI 245
+T + + F + ER++++
Sbjct: 481 MTVKMSEVFANICSVVPDVERITAL 505
>Z49888-4|CAH60776.1| 742|Caenorhabditis elegans Hypothetical
protein F47A4.3b protein.
Length = 742
Score = 42.7 bits (96), Expect = 3e-04
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = +3
Query: 12 GLYRKSGLSSKVXXXXXXXXXXXXXGVEKLDSYAVHVRASVLKSFFRELPEPLLTFDLYD 191
G+YR+ G+ S + + + ++ +S+LK +FR+LP PL T+ Y
Sbjct: 295 GIYRQCGIQSNIQRLRAKFDSGAEPDLHEFGQRDIYSVSSLLKQYFRQLPNPLFTYQAYP 354
Query: 192 DFILAAQISDP-QERVSSI 245
I A + D E+V S+
Sbjct: 355 KLIEAFEKEDSLSEKVESL 373
>Z49888-3|CAA90063.2| 759|Caenorhabditis elegans Hypothetical
protein F47A4.3a protein.
Length = 759
Score = 42.7 bits (96), Expect = 3e-04
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = +3
Query: 12 GLYRKSGLSSKVXXXXXXXXXXXXXGVEKLDSYAVHVRASVLKSFFRELPEPLLTFDLYD 191
G+YR+ G+ S + + + ++ +S+LK +FR+LP PL T+ Y
Sbjct: 312 GIYRQCGIQSNIQRLRAKFDSGAEPDLHEFGQRDIYSVSSLLKQYFRQLPNPLFTYQAYP 371
Query: 192 DFILAAQISDP-QERVSSI 245
I A + D E+V S+
Sbjct: 372 KLIEAFEKEDSLSEKVESL 390
>AC024755-8|AAF59636.2| 604|Caenorhabditis elegans Hypothetical
protein Y34B4A.8 protein.
Length = 604
Score = 42.7 bits (96), Expect = 3e-04
Identities = 26/78 (33%), Positives = 40/78 (51%)
Frame = +3
Query: 12 GLYRKSGLSSKVXXXXXXXXXXXXXGVEKLDSYAVHVRASVLKSFFRELPEPLLTFDLYD 191
G++R SG +SK+ EK + H AS LK++ RELP+PL L
Sbjct: 274 GIFRVSGNASKIKRIRAALDAGQFDADEKHYNNDPHAVASTLKAYLRELPDPLTMDSLQS 333
Query: 192 DFILAAQISDPQERVSSI 245
D++ A + + +ER S+I
Sbjct: 334 DWVEAINL-EGEERFSAI 350
>U02289-1|AAA18934.1| 1439|Caenorhabditis elegans GTPase-activating
protein protein.
Length = 1439
Score = 42.3 bits (95), Expect = 3e-04
Identities = 17/46 (36%), Positives = 30/46 (65%)
Frame = +2
Query: 254 IKKLPKPNFDLVERLIFHLARVALQEEHNRMGPNALAIVFAPCILR 391
++KLP+P++D + LI HL+ + + N+M LA++F P I+R
Sbjct: 904 LRKLPRPHYDTLRFLIVHLSEITKHSDVNKMECRNLALMFGPSIVR 949
Score = 41.5 bits (93), Expect = 6e-04
Identities = 26/54 (48%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +3
Query: 90 VEKLDSY--AVHVRASVLKSFFRELPEPLLTFDLYDDFILAAQISDPQERVSSI 245
VE LD V+V +S+LK F R+LPEPLLT LY FI A +IS R+ +
Sbjct: 847 VESLDPRWRDVNVVSSLLKMFLRKLPEPLLTDKLYPFFIDANRISTHHNRLHKL 900
>L16687-1|AAK71357.2| 1317|Caenorhabditis elegans Hypothetical
protein C04D8.1 protein.
Length = 1317
Score = 42.3 bits (95), Expect = 3e-04
Identities = 17/46 (36%), Positives = 30/46 (65%)
Frame = +2
Query: 254 IKKLPKPNFDLVERLIFHLARVALQEEHNRMGPNALAIVFAPCILR 391
++KLP+P++D + LI HL+ + + N+M LA++F P I+R
Sbjct: 782 LRKLPRPHYDTLRFLIVHLSEITKHSDVNKMECRNLALMFGPSIVR 827
Score = 41.5 bits (93), Expect = 6e-04
Identities = 26/54 (48%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +3
Query: 90 VEKLDSY--AVHVRASVLKSFFRELPEPLLTFDLYDDFILAAQISDPQERVSSI 245
VE LD V+V +S+LK F R+LPEPLLT LY FI A +IS R+ +
Sbjct: 725 VESLDPRWRDVNVVSSLLKMFLRKLPEPLLTDKLYPFFIDANRISTHHNRLHKL 778
>Z46241-4|CAA86318.1| 837|Caenorhabditis elegans Hypothetical
protein C38D4.5 protein.
Length = 837
Score = 38.3 bits (85), Expect = 0.006
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = +2
Query: 254 IKKLPKPNFDLVERLIFHLARVALQEEHNRMGPNALAIVFAPCI 385
+ +LP N + ++ L+ HL RVA NRM + LAIVF P +
Sbjct: 722 LSRLPNENRETLKMLLRHLNRVASHSSQNRMQQHNLAIVFGPTL 765
Score = 37.9 bits (84), Expect = 0.007
Identities = 23/76 (30%), Positives = 34/76 (44%)
Frame = +3
Query: 6 TEGLYRKSGLSSKVXXXXXXXXXXXXXGVEKLDSYAVHVRASVLKSFFRELPEPLLTFDL 185
T+G+YR SG S V + + +HV LK FFREL +PL L
Sbjct: 641 TDGIYRVSGNLSAVQKIRCQADQDNYKALVSEED--IHVLTGALKLFFRELTDPLFPISL 698
Query: 186 YDDFILAAQISDPQER 233
+ ++ A Q+ + R
Sbjct: 699 HKEYTSAMQMPNATTR 714
>Z93384-3|CAB07634.3| 1341|Caenorhabditis elegans Hypothetical protein
H08M01.2b protein.
Length = 1341
Score = 35.1 bits (77), Expect = 0.052
Identities = 24/79 (30%), Positives = 35/79 (44%)
Frame = +3
Query: 9 EGLYRKSGLSSKVXXXXXXXXXXXXXGVEKLDSYAVHVRASVLKSFFRELPEPLLTFDLY 188
EGLYR G + + V D+ VHV A+ LKSFF LPE L+ +
Sbjct: 1181 EGLYRVPGNQTHLAEVEKRFLKYGEFDVSSFDT-PVHVAATALKSFFSCLPESLIPTAYH 1239
Query: 189 DDFILAAQISDPQERVSSI 245
+ +SD +++ I
Sbjct: 1240 LRWKQIMMVSDDIKKIDGI 1258
>Z93384-2|CAE54901.1| 1320|Caenorhabditis elegans Hypothetical protein
H08M01.2a protein.
Length = 1320
Score = 35.1 bits (77), Expect = 0.052
Identities = 24/79 (30%), Positives = 35/79 (44%)
Frame = +3
Query: 9 EGLYRKSGLSSKVXXXXXXXXXXXXXGVEKLDSYAVHVRASVLKSFFRELPEPLLTFDLY 188
EGLYR G + + V D+ VHV A+ LKSFF LPE L+ +
Sbjct: 1181 EGLYRVPGNQTHLAEVEKRFLKYGEFDVSSFDT-PVHVAATALKSFFSCLPESLIPTAYH 1239
Query: 189 DDFILAAQISDPQERVSSI 245
+ +SD +++ I
Sbjct: 1240 LRWKQIMMVSDDIKKIDGI 1258
>Z73425-7|CAA97790.1| 1059|Caenorhabditis elegans Hypothetical
protein F12F6.5 protein.
Length = 1059
Score = 35.1 bits (77), Expect = 0.052
Identities = 22/76 (28%), Positives = 33/76 (43%)
Frame = +3
Query: 9 EGLYRKSGLSSKVXXXXXXXXXXXXXGVEKLDSYAVHVRASVLKSFFRELPEPLLTFDLY 188
+GL+R SG S++ D + A VLK +FREL EP+ ++
Sbjct: 559 QGLFRVSGSQSEINRFREAYERGEDLFQYLDDGSDANSAAGVLKLYFRELREPIFPIFMF 618
Query: 189 DDFILAAQISDPQERV 236
+ F A+ P E V
Sbjct: 619 EQFCDCAKSESPTEFV 634
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +2
Query: 254 IKKLPKPNFDLVERLIFHLARVALQEEHNRMGPNALAIVFAPCIL 388
+ KLP + L+ L L+ + + N M P+ LAI F P +L
Sbjct: 641 VSKLPVSHVLLLRFLFAFLSHLCEFADENMMEPHNLAICFGPTLL 685
>Z66521-14|CAI70416.1| 245|Caenorhabditis elegans Hypothetical
protein W02B12.8b protein.
Length = 245
Score = 35.1 bits (77), Expect = 0.052
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = +2
Query: 254 IKKLPKPNFDLVERLIFHLARVALQEEHNRMGPNALAIVFAP 379
+K LP+ N+ L++ +I L RVA + N M N L++VF P
Sbjct: 169 VKLLPRENYILLKTVIKFLTRVAENSKVNLMTANNLSVVFGP 210
Score = 32.7 bits (71), Expect = 0.28
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +3
Query: 96 KLDSYAVHVRASVL-KSFFRELPEPLLTFDLYDDFILAAQISDPQE 230
K + Y + ASVL K+FFR L EPL T LY +++S ++
Sbjct: 116 KDNEYVASLHASVLLKTFFRSLGEPLTTNRLYPKLAALSEVSKTEK 161
>Z66521-13|CAA91403.1| 444|Caenorhabditis elegans Hypothetical
protein W02B12.8a protein.
Length = 444
Score = 35.1 bits (77), Expect = 0.052
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = +2
Query: 254 IKKLPKPNFDLVERLIFHLARVALQEEHNRMGPNALAIVFAP 379
+K LP+ N+ L++ +I L RVA + N M N L++VF P
Sbjct: 368 VKLLPRENYILLKTVIKFLTRVAENSKVNLMTANNLSVVFGP 409
Score = 32.7 bits (71), Expect = 0.28
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +3
Query: 96 KLDSYAVHVRASVL-KSFFRELPEPLLTFDLYDDFILAAQISDPQE 230
K + Y + ASVL K+FFR L EPL T LY +++S ++
Sbjct: 315 KDNEYVASLHASVLLKTFFRSLGEPLTTNRLYPKLAALSEVSKTEK 360
>Z81568-11|CAB04593.1| 681|Caenorhabditis elegans Hypothetical
protein K08E3.6 protein.
Length = 681
Score = 33.9 bits (74), Expect = 0.12
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +2
Query: 254 IKKLPKPNFDLVERLIFHLARVALQEEHNRMGPNALAIVFAPCILRTHKVQPAQ 415
I +LP+ N D + L H +V Q N+M A+A + AP ++ H V+ +Q
Sbjct: 536 ICELPQANRDTLAYLFIHWRKVIAQSSRNKMNCEAMARMVAPAVM-GHPVKQSQ 588
>U97192-1|AAB52434.2| 986|Caenorhabditis elegans Hypothetical
protein C01F4.2a protein.
Length = 986
Score = 33.5 bits (73), Expect = 0.16
Identities = 17/43 (39%), Positives = 29/43 (67%)
Frame = +3
Query: 117 HVRASVLKSFFRELPEPLLTFDLYDDFILAAQISDPQERVSSI 245
H A++LK +FR+LP+ LL + Y +I AA++ + ER+ +I
Sbjct: 586 HDVATLLKEYFRDLPQSLLPGEHYSAYIGAAKL-NVDERIEAI 627
>U28741-7|AAO38645.1| 721|Caenorhabditis elegans Synapse defective
protein 1, isoformc protein.
Length = 721
Score = 32.7 bits (71), Expect = 0.28
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = +3
Query: 117 HVRASVLKSFFRELPEPLLTFDLYDDFILAAQISDPQE 230
+V A ++K F RELPEPL++ ++ + AA ++ P +
Sbjct: 558 NVIACLIKDFLRELPEPLISPQIHGMLLEAASVALPND 595
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +2
Query: 305 HLARVALQEEHNRMGPNALAIVFAPCI 385
HL+ V HN + P L+++FAP +
Sbjct: 624 HLSTVLCSSPHNGLTPTRLSLIFAPLL 650
>U28741-6|AAO21428.1| 942|Caenorhabditis elegans Synapse defective
protein 1, isoformb protein.
Length = 942
Score = 32.7 bits (71), Expect = 0.28
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = +3
Query: 117 HVRASVLKSFFRELPEPLLTFDLYDDFILAAQISDPQE 230
+V A ++K F RELPEPL++ ++ + AA ++ P +
Sbjct: 756 NVIACLIKDFLRELPEPLISPQIHGMLLEAASVALPND 793
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +2
Query: 305 HLARVALQEEHNRMGPNALAIVFAPCI 385
HL+ V HN + P L+++FAP +
Sbjct: 822 HLSTVLCSSPHNGLTPTRLSLIFAPLL 848
>U28741-5|AAO38644.1| 987|Caenorhabditis elegans Synapse defective
protein 1, isoforma protein.
Length = 987
Score = 32.7 bits (71), Expect = 0.28
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = +3
Query: 117 HVRASVLKSFFRELPEPLLTFDLYDDFILAAQISDPQE 230
+V A ++K F RELPEPL++ ++ + AA ++ P +
Sbjct: 824 NVIACLIKDFLRELPEPLISPQIHGMLLEAASVALPND 861
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +2
Query: 305 HLARVALQEEHNRMGPNALAIVFAPCI 385
HL+ V HN + P L+++FAP +
Sbjct: 890 HLSTVLCSSPHNGLTPTRLSLIFAPLL 916
>AF546880-1|AAN38752.1| 942|Caenorhabditis elegans axon identity
specification proteinSYD-1 protein.
Length = 942
Score = 32.7 bits (71), Expect = 0.28
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = +3
Query: 117 HVRASVLKSFFRELPEPLLTFDLYDDFILAAQISDPQE 230
+V A ++K F RELPEPL++ ++ + AA ++ P +
Sbjct: 756 NVIACLIKDFLRELPEPLISPQIHGMLLEAASVALPND 793
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +2
Query: 305 HLARVALQEEHNRMGPNALAIVFAPCI 385
HL+ V HN + P L+++FAP +
Sbjct: 822 HLSTVLCSSPHNGLTPTRLSLIFAPLL 848
>U97192-2|AAO38678.1| 622|Caenorhabditis elegans Hypothetical
protein C01F4.2b protein.
Length = 622
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +3
Query: 117 HVRASVLKSFFRELPEPLLTFDLYDDFILAA 209
H A++LK +FR+LP+ LL + Y +I AA
Sbjct: 586 HDVATLLKEYFRDLPQSLLPGEHYSAYIGAA 616
>AC092690-1|AAK73856.2| 427|Caenorhabditis elegans Hypothetical
protein BE0003N10.2 protein.
Length = 427
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +3
Query: 114 VHVRASVLKSFFRELPEPLLTFDLYDDFILAAQ 212
+H +LK +FR LP+ L+ F ++ ++A Q
Sbjct: 365 IHTVCGLLKLYFRLLPQQLIPFSVHKQLLVAYQ 397
>Z81130-4|CAB03414.2| 512|Caenorhabditis elegans Hypothetical
protein T23G11.5 protein.
Length = 512
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = +3
Query: 6 TEGLYRKSGLSSKVXXXXXXXXXXXXXGVEKLDSYAVHVRASVLKSFFRELPEPLLTFD 182
TEG+YR S S++ EK+ H A ++K F R++PEP++ +
Sbjct: 90 TEGIYRLSPPKSRLDELERRANCG-----EKMIFADAHDAAGLIKRFLRQIPEPVVPIE 143
>AL033536-1|CAA22138.1| 908|Caenorhabditis elegans Hypothetical
protein Y53C10A.4 protein.
Length = 908
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/61 (29%), Positives = 25/61 (40%)
Frame = +3
Query: 9 EGLYRKSGLSSKVXXXXXXXXXXXXXGVEKLDSYAVHVRASVLKSFFRELPEPLLTFDLY 188
EG++RKS S K Y HV AS+LK + R +P +L Y
Sbjct: 282 EGIFRKSPKQSTFKELKCELDKGVVPDFHK---YNTHVLASILKEYLRSIPGKILLSGNY 338
Query: 189 D 191
+
Sbjct: 339 E 339
>AC084268-3|AAK19005.5| 397|Caenorhabditis elegans Hypothetical
protein Y92H12BL.4 protein.
Length = 397
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +3
Query: 117 HVRASVLKSFFRELPEPLLTFDLYDDFILAAQISDPQERV 236
+V A +LK + R+LP PL+ LY ++AA+ +P E +
Sbjct: 286 NVPAGLLKLWLRQLPVPLILPTLYQRALVAAE--NPAEAI 323
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.315 0.128 0.390
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,967,990
Number of Sequences: 27780
Number of extensions: 202816
Number of successful extensions: 781
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 716
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 777
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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