Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021783
         (691 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X85998-1|CAA59990.1|  110|Drosophila melanogaster elastin like p...    36   0.052
AY070884-1|AAL48506.1| 1299|Drosophila melanogaster LD29123p pro...    31   1.1  
AE014297-4135|AAF56718.2| 1265|Drosophila melanogaster CG5658-PA...    31   1.1  

>X85998-1|CAA59990.1|  110|Drosophila melanogaster elastin like
          protein protein.
          Length = 110

 Score = 35.9 bits (79), Expect = 0.052
 Identities = 15/15 (100%), Positives = 15/15 (100%)
 Frame = +2

Query: 8  VAAALELVDPPGCRN 52
          VAAALELVDPPGCRN
Sbjct: 6  VAAALELVDPPGCRN 20


>AY070884-1|AAL48506.1| 1299|Drosophila melanogaster LD29123p
           protein.
          Length = 1299

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = +3

Query: 102 SSRSHNIYTVPFCAA*FLRGFPTQTVN 182
           SSRSH I+T+ F  A F+   P++TV+
Sbjct: 216 SSRSHAIFTITFVQAVFMNDMPSETVS 242


>AE014297-4135|AAF56718.2| 1265|Drosophila melanogaster CG5658-PA
           protein.
          Length = 1265

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = +3

Query: 102 SSRSHNIYTVPFCAA*FLRGFPTQTVN 182
           SSRSH I+T+ F  A F+   P++TV+
Sbjct: 216 SSRSHAIFTITFVQAVFMNDMPSETVS 242


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,909,672
Number of Sequences: 53049
Number of extensions: 575193
Number of successful extensions: 1599
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1599
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3005453946
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)