Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021781
         (654 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    27   0.13 
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    22   5.1  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    22   5.1  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    22   5.1  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    22   5.1  

>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 27.1 bits (57), Expect = 0.13
 Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 4/88 (4%)
 Frame = +1

Query: 82  PPSSKLCQSRNC--KSWVSNQHLEGFS-RHSSFFRINLTFGYTNVAILQSS-GSLHWLF* 249
           PP  +L  + NC  K  + +Q +  F   H +     L F + +  +L +S  S  +LF 
Sbjct: 16  PPKFELPTTHNCLKKVLLLSQIVGVFPLNHLNEEPEKLHFTFKSWKVLYTSLTSFGYLFC 75

Query: 250 IPIKFFEIINIGCFVTKFYLIIFNFHHF 333
             + F++   IG  + +    +F FH F
Sbjct: 76  ASLSFYKAFKIGILLNQLITPLFFFHSF 103



 Score = 24.6 bits (51), Expect = 0.72
 Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
 Frame = +1

Query: 175 RINLTFGYTNVAILQSSGSLHW-LF*IPIKFFEIINIGCFVTKFYLIIFN 321
           + NLTF + +  +  S   +   +F     F+ I+N G  +T F   IFN
Sbjct: 219 KCNLTFSWYSKKVFYSKIIISGSIFMTTTSFYRILNSGYNLTTFGSFIFN 268


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +1

Query: 67  KGGHYPPSSKLCQSRNCKSWVSNQHLEGFSR 159
           K  ++P    L  SR   S V+NQ L   +R
Sbjct: 266 KEAYFPKLDSLVSSRAWPSRVANQKLRDLNR 296



 Score = 21.4 bits (43), Expect = 6.7
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -3

Query: 271 FQRT*SGSKRASARNQRTEELQHLYNQKLD 182
           F+R  +  KRA+  N   E ++  Y  KLD
Sbjct: 245 FERLCNKLKRATRFNDFNEAIKEAYFPKLD 274


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -3

Query: 196 NQKLDLSERKKSDVRSLLDAGLIPNF 119
           N+K+ L +    D+  +LD G   NF
Sbjct: 55  NEKIPLKDITPPDLEGILDLGRHENF 80


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 16/76 (21%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
 Frame = +1

Query: 259 KFFEIINIGCFVTKFYLIIFNFHHFDDFYIRHLYKLTFNAFVQSRNGQLFDVNEIVI-SH 435
           ++FE+  +  F   FY  I  F +F           T    + + + Q +  N +++ + 
Sbjct: 225 RYFEVQVLTIFGVSFYFFISTFFYF----------FTTGNIIATYDKQFYIHNALIVRAL 274

Query: 436 FVYFEWCAMFFCTSDV 483
           F++F+  A  + +S V
Sbjct: 275 FLFFQLWATVYTSSQV 290


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 16/76 (21%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
 Frame = +1

Query: 259 KFFEIINIGCFVTKFYLIIFNFHHFDDFYIRHLYKLTFNAFVQSRNGQLFDVNEIVI-SH 435
           ++FE+  +  F   FY  I  F +F           T    + + + Q +  N +++ + 
Sbjct: 221 RYFEVQVLTIFGVSFYFFISTFFYF----------FTTGNIIATYDKQFYIHNALIVRAL 270

Query: 436 FVYFEWCAMFFCTSDV 483
           F++F+  A  + +S V
Sbjct: 271 FLFFQLWATVYTSSQV 286


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,606
Number of Sequences: 336
Number of extensions: 3067
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)