Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021781
         (654 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    23   1.9  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    23   1.9  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    23   1.9  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        23   3.4  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        23   3.4  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        23   3.4  

>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 11/31 (35%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = +1

Query: 478 DVGYVL-GRHIMGPDLSIIFICCSIVECAAS 567
           +V Y+L G+ I G  L  +++ C ++ C AS
Sbjct: 93  NVAYLLLGKWIFGIHLCKLWLTCDVLCCTAS 123


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 11/31 (35%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = +1

Query: 478 DVGYVL-GRHIMGPDLSIIFICCSIVECAAS 567
           +V Y+L G+ I G  L  +++ C ++ C AS
Sbjct: 93  NVAYLLLGKWIFGIHLCKLWLTCDVLCCTAS 123


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 11/31 (35%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = +1

Query: 478 DVGYVL-GRHIMGPDLSIIFICCSIVECAAS 567
           +V Y+L G+ I G  L  +++ C ++ C AS
Sbjct: 93  NVAYLLLGKWIFGIHLCKLWLTCDVLCCTAS 123


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/20 (50%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
 Frame = -1

Query: 261 LNRDLK-EPVQGTRGLKNCN 205
           +++DL    VQG RGLK+C+
Sbjct: 129 IHKDLPINNVQGLRGLKSCH 148


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/20 (50%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
 Frame = -1

Query: 261 LNRDLK-EPVQGTRGLKNCN 205
           +++DL    VQG RGLK+C+
Sbjct: 129 IHKDLPINNVQGLRGLKSCH 148


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/20 (50%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
 Frame = -1

Query: 261 LNRDLK-EPVQGTRGLKNCN 205
           +++DL    VQG RGLK+C+
Sbjct: 129 IHKDLPINNVQGLRGLKSCH 148


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,925
Number of Sequences: 438
Number of extensions: 3065
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)