Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021780
         (714 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   4.3  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   4.3  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   7.5  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   9.9  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   9.9  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   9.9  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +3

Query: 468 HHENLRNVVQNNDDETQ 518
           H+E LR  +  N+DET+
Sbjct: 327 HNEQLRKYLCKNEDETK 343


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +3

Query: 468 HHENLRNVVQNNDDETQ 518
           H+E LR  +  N+DET+
Sbjct: 219 HNEQLRKYLCKNEDETK 235


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 11/38 (28%), Positives = 20/38 (52%), Gaps = 4/38 (10%)
 Frame = -3

Query: 553 LSRVINMLKRKICVSSSLF----CTTLRRFSW*S*TER 452
           +  +++    K+ VS+ L     C T+RR+ W +  ER
Sbjct: 564 MKSILDNKVEKVVVSNRLVESPCCITMRRYGWTANMER 601


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +3

Query: 624 LPVRWHIL*SFTFLRNITA*NDYFREGLII 713
           LPVRW  L S T  R  T  +D +  G+++
Sbjct: 656 LPVRWMALESLTHQR-YTTYSDVWSFGVLL 684


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 12/43 (27%), Positives = 22/43 (51%)
 Frame = +1

Query: 586 FLLRIYY*FLNCICLFDGTSFNPLLFCEILPLKTIISGKA*LF 714
           F + +Y+  L    LFDG  ++   F ++L     +SG + +F
Sbjct: 53  FAVLLYFASLEKNPLFDGQLYSFNTFAKLLIFVVSLSGNSAVF 95


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +3

Query: 369 EYRRYYYTKFKRNICCTYIFAFVF 440
           +YR  Y+   K    CT + A V+
Sbjct: 392 KYRETYFRLSKTKTFCTLVTALVY 415


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,099
Number of Sequences: 336
Number of extensions: 3221
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)