Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021777
         (776 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    23   2.1  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    22   4.8  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    22   4.8  

>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = +3

Query: 57  QIMTIIEHKIRNLEKRKSKLTSYRDLQKAGKELNSDQKVAVA 182
           QI  ++  K+R  +  K+   +Y+ +    KELN D K + A
Sbjct: 110 QIEALVPRKLRLADGGKTLEINYKLIDPDLKELNLDTKESYA 151


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -3

Query: 723 MFTLFMHLFFYWNRTFFYF 667
           + T+F   F+++  TFFYF
Sbjct: 231 VLTIFGVSFYFFISTFFYF 249


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -3

Query: 723 MFTLFMHLFFYWNRTFFYF 667
           + T+F   F+++  TFFYF
Sbjct: 227 VLTIFGVSFYFFISTFFYF 245


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,130
Number of Sequences: 336
Number of extensions: 3333
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20961338
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)