Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021777
         (776 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    31   0.053
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    27   0.65 
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    27   0.86 
AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein p...    25   3.5  
AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      23   8.0  

>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 30.7 bits (66), Expect = 0.053
 Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
 Frame = +3

Query: 9   KSEKPASSEDKDTPIRQIMTIIEHKIRNLEKRKSKLTSYRDLQKAGKELNSDQKVAVAK- 185
           + E+ A+ +D+   +R  +   EH+IRN E   +K  S  D  +A  E    + VA+ + 
Sbjct: 324 QEEQLAAVDDELKKLRTSIEEQEHRIRNREALVAKTDSTIDTYRADIESKKQEYVALKEA 383

Query: 186 YDEVAQTLE 212
           Y  V +TL+
Sbjct: 384 YGTVRRTLQ 392


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 27.1 bits (57), Expect = 0.65
 Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 8/76 (10%)
 Frame = +3

Query: 123 YRDLQKAGKELNSDQKVAVA------KYDEVAQTLEFAR--DLSKQVTAIAILQSVRQKN 278
           +  L  AG+EL+S  KVA+        YD +  TLE     DL+ ++    +L   +++ 
Sbjct: 125 FSSLMNAGQELDSSLKVAMVLKSMPESYDHLTTTLETRSDDDLTMELVKSKLLDEAQKRM 184

Query: 279 KLKRKPGFVMQQRPTK 326
           +   +   +++  P K
Sbjct: 185 EKSHQSESILRVGPEK 200


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
            anion exchanger protein.
          Length = 1102

 Score = 26.6 bits (56), Expect = 0.86
 Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 6/34 (17%)
 Frame = +2

Query: 425  TEDDLKILDDLYPEVTPK------HELNEEGQSG 508
            T+ +LKILDD+ PE+T +      H+L E+G+ G
Sbjct: 1029 TKRELKILDDIMPEMTKRARADDLHQL-EDGEVG 1061


>AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein
           protein.
          Length = 455

 Score = 24.6 bits (51), Expect = 3.5
 Identities = 24/102 (23%), Positives = 47/102 (46%)
 Frame = +3

Query: 15  EKPASSEDKDTPIRQIMTIIEHKIRNLEKRKSKLTSYRDLQKAGKELNSDQKVAVAKYDE 194
           E    +E     + Q+  ++E K+R  E+R+       D Q+  +E  + ++   AK D 
Sbjct: 47  ETRKKNESLQEQLTQLRWLMEEKLR--EQRE-------DAQR--REEEARRREEAAKADN 95

Query: 195 VAQTLEFARDLSKQVTAIAILQSVRQKNKLKRKPGFVMQQRP 320
               +E     +  +   A L+ ++QKN++KR+      Q+P
Sbjct: 96  EKLRVEQQETHTTLIAISAQLRDLQQKNQMKRQQQHQPPQQP 137


>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 12/48 (25%), Positives = 23/48 (47%)
 Frame = -3

Query: 738 IYFWFMFTLFMHLFFYWNRTFFYFCDCTIYSFIKVSTFMNC*YNLLNS 595
           +Y++++FT    L  Y  RT       T+     V TF++  ++L  +
Sbjct: 21  VYYYYLFTQCNPLSTYLYRTILALRLVTLLPCFNVLTFISSFFSLFQT 68


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 690,617
Number of Sequences: 2352
Number of extensions: 11496
Number of successful extensions: 15
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81081585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)