Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021776
         (703 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          23   1.8  
AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of act...    23   1.8  
AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity mod...    23   1.8  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    23   3.2  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   4.2  
AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    21   7.4  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   7.4  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    21   9.7  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    21   9.7  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +1

Query: 436 IQNNIDEIVAGCEQD 480
           IQ+N+D +V  CEQD
Sbjct: 317 IQHNLDVLVDMCEQD 331


>AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of
           activity of ets genes protein.
          Length = 108

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = +3

Query: 675 VPKDPRQWS 701
           +PKDPRQW+
Sbjct: 32  LPKDPRQWT 40


>AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity
           modulator protein.
          Length = 108

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = +3

Query: 675 VPKDPRQWS 701
           +PKDPRQW+
Sbjct: 32  LPKDPRQWT 40


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 11/42 (26%), Positives = 23/42 (54%)
 Frame = -2

Query: 372 FGTTSIDQSKHSSLFFILLMSYITSLLKCSS*SYHTSFIKYI 247
           FG+ S     + S+ ++L++  + SLL   +     +F+K+I
Sbjct: 255 FGSGSATPENNVSVVYVLILYILESLLYMVTKLVVVTFLKFI 296


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 460 LSRRYYFVCIYSFF*TNLIF 401
           L R YYF C+   F  +L+F
Sbjct: 53  LRRIYYFYCVSITFNVHLLF 72



 Score = 21.4 bits (43), Expect = 7.4
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -1

Query: 448 YYFVCIYSFF*TNLIF 401
           YYF C +  F  +L+F
Sbjct: 147 YYFYCAFIIFTVHLLF 162



 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -1

Query: 475 VHIQRLSRRYYFVCIYSFF*TNLIF 401
           VH+  L   Y+F C +  F  +L+F
Sbjct: 158 VHLLFLLCIYHFFCAFIIFTMHLLF 182


>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +1

Query: 304 DIRHKQNEKQRGVF 345
           D   K+N+K+RG+F
Sbjct: 172 DTNGKKNQKKRGIF 185


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +1

Query: 304 DIRHKQNEKQRGVF 345
           D   K+N+K+RG+F
Sbjct: 328 DTNGKKNQKKRGIF 341


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 13/38 (34%), Positives = 15/38 (39%)
 Frame = +3

Query: 486 PAAKHSGGSAIAGMGIKVMMKAFNKPKDIPSQVPPLTP 599
           P  K S G     +G     KAF     IP   PP+ P
Sbjct: 4   PVVKISTGKLCGKVGKNFNNKAFFCFHGIPYAKPPIGP 41


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 13/38 (34%), Positives = 15/38 (39%)
 Frame = +3

Query: 486 PAAKHSGGSAIAGMGIKVMMKAFNKPKDIPSQVPPLTP 599
           P  K S G     +G     KAF     IP   PP+ P
Sbjct: 4   PVVKISTGKLCGKVGKNFNNKAFFCFHGIPYAKPPIGP 41


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,160
Number of Sequences: 336
Number of extensions: 3054
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)