Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021776
         (703 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           26   1.00 
DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.        25   1.7  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            25   1.7  
M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    24   4.0  
Y17702-1|CAA76822.2|  260|Anopheles gambiae putative gVAG protei...    23   7.0  
AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           23   7.0  
AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    23   7.0  

>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 26.2 bits (55), Expect = 1.00
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = +2

Query: 521  RHGNQSHDESFQ*AKRHPIAGAATDPGHQQEDGRGAEG 634
            RH  QS  +S    K+H   G+   P ++  DG  + G
Sbjct: 1372 RHNRQSKADSLDSPKKHRRNGSCPGPSNESTDGGESMG 1409


>DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.
          Length = 494

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = +3

Query: 561 PKDIPSQVPPLTPGTNKKMAE 623
           P + PSQ+P LTP  + K+++
Sbjct: 70  PTNAPSQLPALTPDNDAKISQ 90


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -2

Query: 192  VVCDFSYIPSVTHSKAPINEI 130
            +V D S+IPS TH +  I+ I
Sbjct: 1459 LVFDISFIPSTTHGRIDIDHI 1479


>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 10/24 (41%), Positives = 16/24 (66%), Gaps = 3/24 (12%)
 Frame = -3

Query: 497 FCR---WLKSCSHPATISSILFCM 435
           FCR   WL+SCS  +++ ++ F M
Sbjct: 12  FCRDIVWLRSCSCHSSVCAVSFVM 35


>Y17702-1|CAA76822.2|  260|Anopheles gambiae putative gVAG protein
           precursor protein.
          Length = 260

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = -1

Query: 448 YYFVCIYSFF*TNLI 404
           YYFVC YSF  TN++
Sbjct: 210 YYFVCNYSF--TNIM 222


>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -3

Query: 98  RSRRFVFRTGHCKREAQGFRSVKQAVRA 15
           R++   F TG C+   QGFR+++ +  A
Sbjct: 813 RAQLLQFVTGSCRVPLQGFRALQGSTGA 840


>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = -2

Query: 510 ILHYVLPLVKVLFTSSDYLVDII 442
           IL+Y LPLV V+  +  Y++ ++
Sbjct: 45  ILYYDLPLVYVIIIAIYYIITLV 67


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 694,153
Number of Sequences: 2352
Number of extensions: 13868
Number of successful extensions: 18
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71504505
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)