Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021775
(638 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
J04973-1|AAA35710.1| 453|Homo sapiens protein ( Human cytochrom... 71 3e-12
BC003136-1|AAH03136.1| 453|Homo sapiens ubiquinol-cytochrome c ... 71 3e-12
BC000484-1|AAH00484.1| 453|Homo sapiens UQCRC2 protein protein. 71 3e-12
L16842-1|AAA20046.1| 480|Homo sapiens ubiquinol-cytochrome c re... 37 0.053
D26485-1|BAA05495.1| 480|Homo sapiens core I protein protein. 37 0.053
BC009586-1|AAH09586.1| 480|Homo sapiens ubiquinol-cytochrome c ... 37 0.053
BC010398-1|AAH10398.1| 490|Homo sapiens PMPCB protein protein. 36 0.16
BC014079-1|AAH14079.2| 480|Homo sapiens PMPCB protein protein. 33 1.1
>J04973-1|AAA35710.1| 453|Homo sapiens protein ( Human cytochrome
bc-1 complex core protein II mRNA, complete cds. ).
Length = 453
Score = 71.3 bits (167), Expect = 3e-12
Identities = 36/96 (37%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
Frame = +1
Query: 241 SRIGMSHVLRSAAGLTTKNISSFLIQRKLSQIGAYVSASGDRELIYYTLEATQDKLNDAL 420
S +G +H+LR + LTTK SSF I R + +G +S + RE + YT+E + ++ +
Sbjct: 75 SNLGTTHLLRLTSSLTTKGASSFKITRGIEAVGGKLSVTATRENMAYTVECLRGDVDILM 134
Query: 421 EILNNLVSNQEFRPWELNDNAPRLKYD--IIFYHPK 522
E L N+ + EFR WE+ D P+LK D + F +P+
Sbjct: 135 EFLLNVTTAPEFRRWEVADLQPQLKIDKAVAFQNPQ 170
Score = 44.4 bits (100), Expect = 3e-04
Identities = 22/57 (38%), Positives = 35/57 (61%)
Frame = +2
Query: 83 IRGYAQAAPAVKKDVRIQSSVLPNKTFVAALDNGSPVTRVTIAFKAGSRYEPQAELG 253
++ A A A + ++ + LPN +A+L+N SPV+R+ + KAGSRYE + LG
Sbjct: 22 VKATAAPAGAPPQPQDLEFTKLPNGLVIASLENYSPVSRIGLFIKAGSRYEDFSNLG 78
>BC003136-1|AAH03136.1| 453|Homo sapiens ubiquinol-cytochrome c
reductase core protein II protein.
Length = 453
Score = 71.3 bits (167), Expect = 3e-12
Identities = 36/96 (37%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
Frame = +1
Query: 241 SRIGMSHVLRSAAGLTTKNISSFLIQRKLSQIGAYVSASGDRELIYYTLEATQDKLNDAL 420
S +G +H+LR + LTTK SSF I R + +G +S + RE + YT+E + ++ +
Sbjct: 75 SNLGTTHLLRLTSSLTTKGASSFKITRGIEAVGGKLSVTATRENMAYTVECLRGDVDILM 134
Query: 421 EILNNLVSNQEFRPWELNDNAPRLKYD--IIFYHPK 522
E L N+ + EFR WE+ D P+LK D + F +P+
Sbjct: 135 EFLLNVTTAPEFRRWEVADLQPQLKIDKAVAFQNPQ 170
Score = 44.4 bits (100), Expect = 3e-04
Identities = 22/57 (38%), Positives = 35/57 (61%)
Frame = +2
Query: 83 IRGYAQAAPAVKKDVRIQSSVLPNKTFVAALDNGSPVTRVTIAFKAGSRYEPQAELG 253
++ A A A + ++ + LPN +A+L+N SPV+R+ + KAGSRYE + LG
Sbjct: 22 VKATAAPAGAPPQPQDLEFTKLPNGLVIASLENYSPVSRIGLFIKAGSRYEDFSNLG 78
>BC000484-1|AAH00484.1| 453|Homo sapiens UQCRC2 protein protein.
Length = 453
Score = 71.3 bits (167), Expect = 3e-12
Identities = 36/96 (37%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
Frame = +1
Query: 241 SRIGMSHVLRSAAGLTTKNISSFLIQRKLSQIGAYVSASGDRELIYYTLEATQDKLNDAL 420
S +G +H+LR + LTTK SSF I R + +G +S + RE + YT+E + ++ +
Sbjct: 75 SNLGTTHLLRLTSSLTTKGASSFKITRGIEAVGGKLSVTATRENMAYTVECLRGDVDILM 134
Query: 421 EILNNLVSNQEFRPWELNDNAPRLKYD--IIFYHPK 522
E L N+ + EFR WE+ D P+LK D + F +P+
Sbjct: 135 EFLLNVTTAPEFRRWEVADLQPQLKIDKAVAFQNPQ 170
Score = 44.4 bits (100), Expect = 3e-04
Identities = 22/57 (38%), Positives = 35/57 (61%)
Frame = +2
Query: 83 IRGYAQAAPAVKKDVRIQSSVLPNKTFVAALDNGSPVTRVTIAFKAGSRYEPQAELG 253
++ A A A + ++ + LPN +A+L+N SPV+R+ + KAGSRYE + LG
Sbjct: 22 VKATAAPAGAPPQPQDLEFTKLPNGLVIASLENYSPVSRIGLFIKAGSRYEDFSNLG 78
>L16842-1|AAA20046.1| 480|Homo sapiens ubiquinol-cytochrome c
reductase core I protein protein.
Length = 480
Score = 37.1 bits (82), Expect = 0.053
Identities = 20/71 (28%), Positives = 36/71 (50%)
Frame = +1
Query: 235 TTSRIGMSHVLRSAAGLTTKNISSFLIQRKLSQIGAYVSASGDRELIYYTLEATQDKLND 414
T G + L A TKN +++++ +GA+++A RE Y ++A L
Sbjct: 83 TEKNNGAGYFLEHLAFKGTKNRPGSALEKEVESMGAHLNAYSTREHTAYYIKALSKDLPK 142
Query: 415 ALEILNNLVSN 447
A+E+L ++V N
Sbjct: 143 AVELLGDIVQN 153
>D26485-1|BAA05495.1| 480|Homo sapiens core I protein protein.
Length = 480
Score = 37.1 bits (82), Expect = 0.053
Identities = 20/71 (28%), Positives = 36/71 (50%)
Frame = +1
Query: 235 TTSRIGMSHVLRSAAGLTTKNISSFLIQRKLSQIGAYVSASGDRELIYYTLEATQDKLND 414
T G + L A TKN +++++ +GA+++A RE Y ++A L
Sbjct: 83 TEKNNGAGYFLEHLAFKGTKNRPGSALEKEVESMGAHLNAYSTREHTAYYIKALSKDLPK 142
Query: 415 ALEILNNLVSN 447
A+E+L ++V N
Sbjct: 143 AVELLGDIVQN 153
>BC009586-1|AAH09586.1| 480|Homo sapiens ubiquinol-cytochrome c
reductase core protein I protein.
Length = 480
Score = 37.1 bits (82), Expect = 0.053
Identities = 20/71 (28%), Positives = 36/71 (50%)
Frame = +1
Query: 235 TTSRIGMSHVLRSAAGLTTKNISSFLIQRKLSQIGAYVSASGDRELIYYTLEATQDKLND 414
T G + L A TKN +++++ +GA+++A RE Y ++A L
Sbjct: 83 TEKNNGAGYFLEHLAFKGTKNRPGSALEKEVESMGAHLNAYSTREHTAYYIKALSKDLPK 142
Query: 415 ALEILNNLVSN 447
A+E+L ++V N
Sbjct: 143 AVELLGDIVQN 153
>BC010398-1|AAH10398.1| 490|Homo sapiens PMPCB protein protein.
Length = 490
Score = 35.5 bits (78), Expect = 0.16
Identities = 20/66 (30%), Positives = 34/66 (51%)
Frame = +1
Query: 250 GMSHVLRSAAGLTTKNISSFLIQRKLSQIGAYVSASGDRELIYYTLEATQDKLNDALEIL 429
G +H L A TK S ++ ++ +GA+++A RE Y +A L A+EIL
Sbjct: 98 GTAHFLEHMAFKGTKKRSQLDLELEIENMGAHLNAYTSREQTVYYAKAFSKDLPRAVEIL 157
Query: 430 NNLVSN 447
+++ N
Sbjct: 158 ADIIQN 163
>BC014079-1|AAH14079.2| 480|Homo sapiens PMPCB protein protein.
Length = 480
Score = 32.7 bits (71), Expect = 1.1
Identities = 19/66 (28%), Positives = 33/66 (50%)
Frame = +1
Query: 250 GMSHVLRSAAGLTTKNISSFLIQRKLSQIGAYVSASGDRELIYYTLEATQDKLNDALEIL 429
G +H A TK S ++ ++ +GA+++A RE Y +A L A+EIL
Sbjct: 89 GTAHFPEHMAFKGTKKRSQLDLELEIENMGAHLNAYTSREQTVYYAKAFSKDLPRAVEIL 148
Query: 430 NNLVSN 447
+++ N
Sbjct: 149 ADIIQN 154
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,779,531
Number of Sequences: 237096
Number of extensions: 1817149
Number of successful extensions: 3234
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3234
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7028963750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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