Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021774
         (725 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    25   0.83 
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    24   1.1  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   7.7  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    21   7.7  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          21   7.7  

>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 24.6 bits (51), Expect = 0.83
 Identities = 13/45 (28%), Positives = 23/45 (51%)
 Frame = +3

Query: 9   LDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVY 143
           +D K E H+E+  A + E+R+  +   +G+  T   L    + VY
Sbjct: 178 IDEKAEEHKEQFTALVREIRNAFRH--DGLLLTMSVLPNVNSSVY 220


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -1

Query: 248 DLANLFLMFAQTLDHLLEVLVTLVGSCG 165
           ++ NL+L     +  L++  +TLV  CG
Sbjct: 263 EIDNLYLKHKLEISSLVQTAITLVAMCG 290


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = +2

Query: 170 SCRQA*REPQEDDRASART*GTSSQGPRRNQEKFQQLESA 289
           SC +    P+ED+R  A + G  S     N + F + ++A
Sbjct: 32  SCLKTTPPPEEDNRGCAASVGEGSFYLPMNMQGFVKQQTA 71


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 14/31 (45%), Positives = 15/31 (48%)
 Frame = -1

Query: 356 VSLSAQLQ*ADVGRRPAAASPGWRSRAAGTS 264
           VSLS          RP  AS G R+R A TS
Sbjct: 64  VSLSENRSHEPEMERPKGASNGKRARTAYTS 94


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 14/31 (45%), Positives = 15/31 (48%)
 Frame = -1

Query: 356 VSLSAQLQ*ADVGRRPAAASPGWRSRAAGTS 264
           VSLS          RP  AS G R+R A TS
Sbjct: 84  VSLSENRSHEPEMERPKGASNGKRARTAYTS 114


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,429
Number of Sequences: 336
Number of extensions: 2349
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)