Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021774
(725 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC947.08c |||histone promoter control protein Hpc2 |Schizosacc... 32 0.073
SPAC19A8.07c |||U3 snoRNP-associated protein Imp4 |Schizosacchar... 32 0.073
SPBC3D6.04c |mad1||mitotic spindle checkpoint protein Mad1|Schiz... 31 0.13
SPCC188.12 |spn6|SPCC584.09|septin Spn6|Schizosaccharomyces pomb... 31 0.17
SPAC57A10.10c |sla1||La protein homolog|Schizosaccharomyces pomb... 31 0.17
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 31 0.22
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 30 0.29
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 30 0.29
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 29 0.51
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 29 0.51
SPBC146.03c |cut3|smc4, smc4|condensin subunit Cut3|Schizosaccha... 29 0.89
SPBC11C11.03 |ndc80|ndc10, tid3|spindle pole body protein Ndc80|... 29 0.89
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 28 1.2
SPACUNK12.02c |cmk1||calcium/calmodulin-dependent protein kinase... 28 1.2
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 28 1.6
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 28 1.6
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 28 1.6
SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex sub... 27 2.1
SPAC144.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 27 2.7
SPBC13E7.07 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 27 2.7
SPAC8C9.07 |||rRNA processing protein Fyv7 |Schizosaccharomyces ... 27 2.7
SPAC13C5.03 |tht1||nuclear membrane protein involved in karyogam... 27 3.6
SPAC4D7.11 |||conserved fungal protein|Schizosaccharomyces pombe... 27 3.6
SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Sch... 27 3.6
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 26 4.8
SPAC17G6.08 |pep7|vac1|prevacuole/endosomal FYVE tethering compo... 26 4.8
SPCC737.06c |||glutamate-cysteine ligase regulatory subunit |Sch... 26 4.8
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 26 6.3
SPBC1734.05c |spf31||DNAJ protein Spf31|Schizosaccharomyces pomb... 26 6.3
SPAC1F3.03 |||Lgl family protein|Schizosaccharomyces pombe|chr 1... 25 8.3
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 25 8.3
SPAC27E2.06c |||methionine-tRNA ligase, mitochondrial|Schizosacc... 25 8.3
>SPBC947.08c |||histone promoter control protein Hpc2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 338
Score = 32.3 bits (70), Expect = 0.073
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Frame = +2
Query: 284 SAIQEKLQQAADRRLLIEAEQREKLRNHNIKLAEVRSAATAKVE--EITKDIENKLTTAE 457
SA+ + D IE+E + LR +I++A + AK E ++ KD+ K
Sbjct: 157 SAVVASADASFDDSRDIESEDEQPLRTLSIEMAAKNALKEAKRENAKVPKDVSKKEAKTT 216
Query: 458 LNREKEIQKKLDFVKKES 511
++EK +K V K+S
Sbjct: 217 KSKEKATKKTSSSVPKQS 234
>SPAC19A8.07c |||U3 snoRNP-associated protein Imp4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 289
Score = 32.3 bits (70), Expect = 0.073
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +3
Query: 30 HEEKREAYINELRSRLKDHLEGVEKTRLTLEQ--QTAEVYKAIEDKMTTAADKRDENLKK 203
++E +EA +NE R L+ LEG ++ L++ Q + YK E + T ++ + NL
Sbjct: 17 NQELQEAKLNEKRRALRKALEGNKELNKDLQEDSQLQKDYKYDESRAT--QEETETNLDD 74
Query: 204 MIERLREHEEQV 239
RL E E +V
Sbjct: 75 EYHRLGEREPKV 86
>SPBC3D6.04c |mad1||mitotic spindle checkpoint protein
Mad1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 689
Score = 31.5 bits (68), Expect = 0.13
Identities = 21/89 (23%), Positives = 42/89 (47%)
Frame = +2
Query: 260 QEKFQQLESAIQEKLQQAADRRLLIEAEQREKLRNHNIKLAEVRSAATAKVEEITKDIEN 439
+E +Q+ S+I+ + A R + E E+ + + I+ + ++E D+E+
Sbjct: 220 EESIKQVSSSIELEKINAEQRLQISELEKLKAAQEERIEKLSSNNRNVEILKEEKNDLES 279
Query: 440 KLTTAELNREKEIQKKLDFVKKESGAPSW 526
KL E R+K +L+ K ++ SW
Sbjct: 280 KLYRFEEYRDKVATLELENEKIQTELNSW 308
>SPCC188.12 |spn6|SPCC584.09|septin Spn6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 380
Score = 31.1 bits (67), Expect = 0.17
Identities = 14/61 (22%), Positives = 30/61 (49%)
Frame = +3
Query: 72 RLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAADKRDENLKKMIERLREHEEQVRKVR 251
RL + +++ + +T ++A E+KM D + L + ER+R E Q+ ++
Sbjct: 312 RLNNEKRAIQQKITQMTNETESFFQAKEEKMIETRDALNSELSEYHERIRALETQIESLK 371
Query: 252 A 254
+
Sbjct: 372 S 372
>SPAC57A10.10c |sla1||La protein homolog|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 298
Score = 31.1 bits (67), Expect = 0.17
Identities = 20/57 (35%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +2
Query: 341 EQREKLRNHNIKLAEVRSAATAKVEEITKDIEN-KLTTAELNREKEIQKKLDFVKKE 508
EQ+E++++ + K + S+ K EE K +E+ K TT+E +E+ +KK D KK+
Sbjct: 5 EQKEEIKDISSK--QENSSEVPKAEEAGKVVESQKDTTSEEKKEETTEKKEDDGKKD 59
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 30.7 bits (66), Expect = 0.22
Identities = 18/83 (21%), Positives = 44/83 (53%)
Frame = +3
Query: 9 LDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAADKRD 188
++A +E K E + + + SR+K + +E TR L +Q ++ + E+K+ +
Sbjct: 474 MNAIVEAESSKNELWDSMMVSRMKTQEQSIELTR--LYKQLQDIEEDYENKLMRMEQQWR 531
Query: 189 ENLKKMIERLREHEEQVRKVRAV 257
E++ ++ E + E ++++ + V
Sbjct: 532 EDVDQLQEYVEEITQELQDTKEV 554
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 30.3 bits (65), Expect = 0.29
Identities = 16/84 (19%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Frame = +3
Query: 3 EALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIE--DKMTTAA 176
E L K+++ ++++ INEL R+K + V + T+++ ++ E +++ A
Sbjct: 530 EGLTLKIDSITKEKDRLINELEQRIKSYEVNVSELNGTIDEYRNKLKDKEETYNEVMNAF 589
Query: 177 DKRDENLKKMIERLREHEEQVRKV 248
+D +L++ E + + +++ +++
Sbjct: 590 QYKDNDLRRFHESINKLQDREKEL 613
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 30.3 bits (65), Expect = 0.29
Identities = 25/94 (26%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Frame = +2
Query: 266 KFQQLESAIQEKLQQAADRRLLIEAEQRE--KLRNHNIKLAEVRSAATAKVEEITKDIEN 439
+F L+ + K ++ + EA Q+E L++ N +L E +A++ E+ITK+
Sbjct: 1431 RFAHLKQELTNKNKELTSKNAENEAMQKEIESLKDSNHQLQE---SASSDAEQITKEQFE 1487
Query: 440 KLTTAELNREKEI-QKKLDFVKKESGAPSWSGRT 538
+L + + EKE+ K + +S A G+T
Sbjct: 1488 QLKSEKERTEKELADSKNELEHLQSEAVDADGKT 1521
Score = 29.9 bits (64), Expect = 0.39
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Frame = +3
Query: 21 METHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAADKRDENL- 197
+E+ RE I LRS L D + VE + E + E+ K +ED A ++D L
Sbjct: 994 VESEISTREEKITSLRSELLDLNKRVEVLKEEKESSSKELAKQLED----AVREKDSALS 1049
Query: 198 -KKMIERLREHEEQV 239
KK E++R ++V
Sbjct: 1050 FKKDYEKIRSDADRV 1064
Score = 27.1 bits (57), Expect = 2.7
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 7/71 (9%)
Frame = +2
Query: 332 IEAEQREKLRNHNIKLAEV------RSAATAKV-EEITKDIENKLTTAELNREKEIQKKL 490
+E + +E N ++KL +V RS A V E+ T+D++NK+T E E + K+L
Sbjct: 1648 VEEKLKENSANFDVKLKKVVAETEFRSKAKISVYEKKTRDLQNKITQLEETIE-NLNKQL 1706
Query: 491 DFVKKESGAPS 523
+K + S
Sbjct: 1707 SNPEKTDESTS 1717
Score = 26.2 bits (55), Expect = 4.8
Identities = 18/69 (26%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = +3
Query: 9 LDAKMETHEEKREAYINELRSRLKDHLEGVEK--TRLTLEQQTAEVYKAIEDKMTTAADK 182
L A+ E +E+ E +NE R+K+ E +K + T + + + +E+K+ +
Sbjct: 1599 LVAEKEKTKEELENQLNEKSQRIKELEEQAQKNSSENTHDNIDDMIKQQVEEKLKENSAN 1658
Query: 183 RDENLKKMI 209
D LKK++
Sbjct: 1659 FDVKLKKVV 1667
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 29.5 bits (63), Expect = 0.51
Identities = 31/156 (19%), Positives = 66/156 (42%)
Frame = +2
Query: 44 RGLHQRAALPSQGSS*GC*EDQVDPGTADRGSVQGHRR*DDHSCRQA*REPQEDDRASAR 223
R ++A L ++ ++ E+Q ++ + + + +A RE +E+ + A
Sbjct: 547 RKAEEKARLEAEENAKREAEEQAKREAEEKAKREAEEKAKREAEEKAKREAEENAKREAE 606
Query: 224 T*GTSSQGPRRNQEKFQQLESAIQEKLQQAADRRLLIEAEQREKLRNHNIKLAEVRSAAT 403
+ +E ++ + +EK ++ A+ + EAE++ K E A
Sbjct: 607 EKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEENAK 666
Query: 404 AKVEEITKDIENKLTTAELNREKEIQKKLDFVKKES 511
+ EE K AE N ++E ++K VK+E+
Sbjct: 667 REAEEKAK------REAEENAKREAEEK---VKRET 693
Score = 27.5 bits (58), Expect = 2.1
Identities = 24/105 (22%), Positives = 44/105 (41%), Gaps = 2/105 (1%)
Frame = +2
Query: 179 QA*REPQEDDRASART*GTSSQGPRRNQEKFQQLESAIQEKLQQAADRRLLIEAEQREKL 358
+A R+ +E R A + +E ++ + +EK ++ A+ + EAE+ K
Sbjct: 544 EAKRKAEEKARLEAEENAKREAEEQAKREAEEKAKREAEEKAKREAEEKAKREAEENAKR 603
Query: 359 RNHNIKLAEVRSAATAKVEEITK-DIENKL-TTAELNREKEIQKK 487
E A + EE K + E K AE ++E ++K
Sbjct: 604 EAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEK 648
Score = 27.1 bits (57), Expect = 2.7
Identities = 21/111 (18%), Positives = 41/111 (36%)
Frame = +2
Query: 179 QA*REPQEDDRASART*GTSSQGPRRNQEKFQQLESAIQEKLQQAADRRLLIEAEQREKL 358
+A RE +E + A + +E ++ + +EK ++ A+ EAE++ K
Sbjct: 616 KAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEENAKREAEEKAKR 675
Query: 359 RNHNIKLAEVRSAATAKVEEITKDIENKLTTAELNREKEIQKKLDFVKKES 511
E + EE K + E ++ EI+ E+
Sbjct: 676 EAEENAKREAEEKVKRETEENAKRKAEEEGKREADKNPEIKSSAPLASSEA 726
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 29.5 bits (63), Expect = 0.51
Identities = 14/70 (20%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = +3
Query: 24 ETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYK---AIEDKMTTAADKRDEN 194
+ HEE + ELR++++++++ E+ ++ E+Y+ A+E ++ D + +
Sbjct: 101 KAHEEVSQQINTELRNKIREYIDQTEQQKVVAANAIEELYQKKTALEIDLSEKKDAYEYS 160
Query: 195 LKKMIERLRE 224
K+ +R+
Sbjct: 161 CNKLNSYMRQ 170
>SPBC146.03c |cut3|smc4, smc4|condensin subunit
Cut3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1324
Score = 28.7 bits (61), Expect = 0.89
Identities = 21/65 (32%), Positives = 37/65 (56%)
Frame = +3
Query: 24 ETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAADKRDENLKK 203
E +EE + + E +++K+ +KTR + EQQT + IE+++ +K ++ LKK
Sbjct: 402 EKNEEVKS--LREKAAKVKNDCTSEKKTRQSYEQQTVK----IEEQLKFLLNK-EKKLKK 454
Query: 204 MIERL 218
IE L
Sbjct: 455 SIEAL 459
>SPBC11C11.03 |ndc80|ndc10, tid3|spindle pole body protein
Ndc80|Schizosaccharomyces pombe|chr 2|||Manual
Length = 624
Score = 28.7 bits (61), Expect = 0.89
Identities = 14/56 (25%), Positives = 30/56 (53%)
Frame = +3
Query: 54 INELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAADKRDENLKKMIERLR 221
+N+L + L+D L G+E +RLT + + + A D + L++ +++L+
Sbjct: 494 VNDLIAELQDELRGIE-SRLTSVLSECNMLRETASEEKNAFDAESDKLERELQQLK 548
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 28.3 bits (60), Expect = 1.2
Identities = 20/79 (25%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Frame = +3
Query: 12 DAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYK-AIEDKMTTAADKRD 188
+ +++ +EK++ + + K + EK +L +QQ A+ K A E ++ +KR
Sbjct: 643 EQRLKREQEKKQQELERQKREEKQKQKEREK-KLKKQQQEADREKMAREQRLREEEEKRI 701
Query: 189 ENLKKMIERLREHEEQVRK 245
+K E+L + EE+ R+
Sbjct: 702 LEERKRREKLDKEEEERRR 720
>SPACUNK12.02c |cmk1||calcium/calmodulin-dependent protein kinase
Cmk1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 335
Score = 28.3 bits (60), Expect = 1.2
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 404 AKVEEITKDIENKLTTAELNREKEIQKKLDFVKKE 508
A V E NK+ A++ +K ++KK DFVK E
Sbjct: 43 ATVREAVHIETNKMYAAKIMNKKMMEKKQDFVKNE 77
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 27.9 bits (59), Expect = 1.6
Identities = 22/78 (28%), Positives = 42/78 (53%)
Frame = +2
Query: 257 NQEKFQQLESAIQEKLQQAADRRLLIEAEQREKLRNHNIKLAEVRSAATAKVEEITKDIE 436
N EKF+++ A+ E A+ +L E+ E+L+ I L A+ ++ + KD +
Sbjct: 931 NNEKFKEVSQALAE-----ANEKLNARDEEIERLKVDIIGLQN----ASLNMQSL-KDSD 980
Query: 437 NKLTTAELNREKEIQKKL 490
N+ + ++ KE++KKL
Sbjct: 981 NRTISDLESKNKELEKKL 998
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 27.9 bits (59), Expect = 1.6
Identities = 16/64 (25%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +2
Query: 263 EKFQQLESAIQEKLQQAADRRLLIEAEQREKLRNHNIKLAEVRSAATAK-VEEITKDIEN 439
++ QLE A+ EKL + + ++E ++ + N EV++ T V + + D+++
Sbjct: 1089 KRVDQLEEALNEKLARLVGEQ-MVEGDKEKDKTNEEKNKDEVKAEMTQPVVNQDSHDLQD 1147
Query: 440 KLTT 451
+L T
Sbjct: 1148 QLAT 1151
Score = 25.4 bits (53), Expect = 8.3
Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Frame = +3
Query: 24 ETHEEKREAYINELRSRLKDHL--EGVEKTRLTLEQQTAEVYKAIEDKMTTAADKRDENL 197
E EEK +A ++ R+ D + +EK + EQQ K +D + A D +
Sbjct: 302 EEGEEKEDA--QNIKERMVDFCFSKFMEKNQQRREQQDKGENKKRQDDVDQATDNNTNTI 359
Query: 198 KKMIERLREHEEQVRKVRA 254
+ E+ + EE+ V A
Sbjct: 360 LEDDEKDNDEEEEEEIVNA 378
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1919
Score = 27.9 bits (59), Expect = 1.6
Identities = 16/64 (25%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +2
Query: 263 EKFQQLESAIQEKLQQAADRRLLIEAEQREKLRNHNIKLAEVRSAATAK-VEEITKDIEN 439
++ QLE A+ EKL + + ++E ++ + N EV++ T V + + D+++
Sbjct: 1089 KRVDQLEEALNEKLARLVGEQ-MVEGDKEKDKTNEEKNKDEVKAEMTQPVVNQDSHDLQD 1147
Query: 440 KLTT 451
+L T
Sbjct: 1148 QLAT 1151
Score = 25.4 bits (53), Expect = 8.3
Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Frame = +3
Query: 24 ETHEEKREAYINELRSRLKDHL--EGVEKTRLTLEQQTAEVYKAIEDKMTTAADKRDENL 197
E EEK +A ++ R+ D + +EK + EQQ K +D + A D +
Sbjct: 302 EEGEEKEDA--QNIKERMVDFCFSKFMEKNQQRREQQDKGENKKRQDDVDQATDNNTNTI 359
Query: 198 KKMIERLREHEEQVRKVRA 254
+ E+ + EE+ V A
Sbjct: 360 LEDDEKDNDEEEEEEIVNA 378
>SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex
subunit Rlf2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 27.5 bits (58), Expect = 2.1
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +3
Query: 99 EKTRLTLEQQTAEVYKAIEDKMTTAADKRDENLKKMIERLREHEEQVRK 245
E+ + E+Q E K + ++ AA K E K ER+R E+Q RK
Sbjct: 96 ERLKREKERQQREQEKKLREQEKIAAKKMKELEKLEKERIRLQEQQRRK 144
>SPAC144.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 112
Score = 27.1 bits (57), Expect = 2.7
Identities = 20/89 (22%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Frame = +2
Query: 236 SSQGPRRNQEKFQQLESAIQEKLQQAADRRLLIEAEQR--EKLRNHNIKLAEVRSAATAK 409
S + P N++ + + + K ++ + + L++ +QR EK +N NI + T
Sbjct: 16 SQKNPNANEDGYFRRKRLA--KKERPFEPKKLVQQQQRLKEKKKNENIIYLKKTMRVTPS 73
Query: 410 VEEITKDIENKLTTAELNREKEIQKKLDF 496
E+I + I K T + R+++ + D+
Sbjct: 74 EEKIHEMINQKRETKKRKRKQKKKNDDDY 102
>SPBC13E7.07 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 273
Score = 27.1 bits (57), Expect = 2.7
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +2
Query: 239 SQGPRRNQEKFQQLESAIQEKLQQAADRRLLIEAEQREKLRNHNIKLAE 385
S G +++ E + + Q+K +A + + L + EQR +L H +L E
Sbjct: 189 SYGKKKSTEPLTKRQRQNQQKKLRAKEMQELADEEQRRRLAAHRKELHE 237
>SPAC8C9.07 |||rRNA processing protein Fyv7 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 144
Score = 27.1 bits (57), Expect = 2.7
Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +3
Query: 93 GVEKTRLTLEQQTAEVYKAIEDKMTTAADKRDENLKKM--IERLREHEEQVRKV 248
G K + + + E+Y+ E+K +K D ++K IE+ ++ EQ R +
Sbjct: 64 GERKRKFSKKSHLQELYERSEEKRRIQQEKEDAKVQKRLEIEKKQKDREQTRNM 117
>SPAC13C5.03 |tht1||nuclear membrane protein involved in karyogamy
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 543
Score = 26.6 bits (56), Expect = 3.6
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +2
Query: 329 LIEAEQREKLRNHN-IKLAEVRSAATAKVEEITKDIENKLTTAELNREKEIQKKLDFV 499
LIE + EK + N I L+ + + + K I+N +TT E + ++ +Q +DFV
Sbjct: 237 LIE-KLNEKFTSENAIALSAIGKYTSEFSAFMEKRIKNLITTTEDSLQQSVQSNIDFV 293
>SPAC4D7.11 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 281
Score = 26.6 bits (56), Expect = 3.6
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +1
Query: 460 EPGKGNTEETRFRQEGERRAELVRQNKSART 552
EP TE++R Q+G+R+ +L RQ ++ R+
Sbjct: 161 EPSDLITEDSRDTQQGQRQEDLQRQLENERS 191
>SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit
Psm3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1194
Score = 26.6 bits (56), Expect = 3.6
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +3
Query: 120 EQQTAEVYKAIEDKMTTAADKRDENLKKMIERLREHEEQ 236
E + AE K I D+ ++K DE L+ + ERLRE EE+
Sbjct: 169 ENRRAESNK-IMDETIQKSEKIDELLQYIEERLRELEEE 206
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 26.2 bits (55), Expect = 4.8
Identities = 18/85 (21%), Positives = 43/85 (50%)
Frame = +2
Query: 236 SSQGPRRNQEKFQQLESAIQEKLQQAADRRLLIEAEQREKLRNHNIKLAEVRSAATAKVE 415
+S NQ+ +++ I E L + + +L E + + L + + +SAA + +
Sbjct: 3974 NSDSEEENQDLDEEVND-IPEDLSNSLNEKLWDEPNEEDLLETE--QKSNEQSAANNESD 4030
Query: 416 EITKDIENKLTTAELNREKEIQKKL 490
++K+ +NK + +EKE ++++
Sbjct: 4031 LVSKEDDNKALEDKDRQEKEDEEEM 4055
>SPAC17G6.08 |pep7|vac1|prevacuole/endosomal FYVE tethering
component Pep7 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 536
Score = 26.2 bits (55), Expect = 4.8
Identities = 17/74 (22%), Positives = 37/74 (50%)
Frame = +3
Query: 27 THEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAADKRDENLKKM 206
T E +RE + + + +++ E + +TR+ LE+Q V IED A ++ ++ +
Sbjct: 456 TSESERE--LEKKKEQVEKKQEELMQTRIVLEEQVFLVENMIED---AKAKRKFSEVETL 510
Query: 207 IERLREHEEQVRKV 248
+ L E++ +
Sbjct: 511 LSSLAPLHEEIHSI 524
>SPCC737.06c |||glutamate-cysteine ligase regulatory subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 287
Score = 26.2 bits (55), Expect = 4.8
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +3
Query: 135 EVYKAIED-KMTTAADKRDENLKKMIERLREHEEQVRKV 248
E+ KA+E+ K+T DENLKK I+ L E+ +K+
Sbjct: 35 ELVKALENVKLTKFTGDGDENLKKNIKVLVPVNEKPQKL 73
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 25.8 bits (54), Expect = 6.3
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 11/93 (11%)
Frame = +2
Query: 215 SART*GTSSQGPRRNQEKFQQLESAIQEKLQQAADRRLLIEAEQREKLRNHNIKLAEV-- 388
S ++ GTS N+E+ ++ + QE L+ + R+ E ++ E LR N L +
Sbjct: 1483 SNKSEGTSKDTEIPNEEEMERKKVMQQEVLRLRS--RIAKELQKNELLRKQNQVLQDQVK 1540
Query: 389 ---------RSAATAKVEEITKDIENKLTTAEL 460
A +A V TKD+EN T E+
Sbjct: 1541 ALQETVVSSEEAESASVHADTKDLENLKKTEEM 1573
>SPBC1734.05c |spf31||DNAJ protein Spf31|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 209
Score = 25.8 bits (54), Expect = 6.3
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +2
Query: 266 KFQQLESAIQEKLQQAADRRLLIEAEQREKLRNHNIKLAEVRSAATAKVEEITKD 430
K + E I +++ + R+L + +QRE+ R I R + KV E T+D
Sbjct: 126 KVRWREILIADEVARRRARQLDLANQQREQARQDEIARERKRRVESEKVWEETRD 180
>SPAC1F3.03 |||Lgl family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1004
Score = 25.4 bits (53), Expect = 8.3
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +3
Query: 48 AYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAADKRD 188
A IN+ ++ + L G+E T LE+ +AE I+D + A K+D
Sbjct: 949 AQINDHLAQRGNMLGGIENTMDDLEEMSAEWANEIKDSL--AGTKKD 993
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 25.4 bits (53), Expect = 8.3
Identities = 9/44 (20%), Positives = 25/44 (56%)
Frame = +3
Query: 54 INELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAADKR 185
+ E + ++ +EG++ + L + +E+ ++E ++TT + R
Sbjct: 407 LKERQVAVRARIEGIKAHEMFLNNRVSEINSSLEKQLTTQKELR 450
>SPAC27E2.06c |||methionine-tRNA ligase,
mitochondrial|Schizosaccharomyces pombe|chr 1|||Manual
Length = 539
Score = 25.4 bits (53), Expect = 8.3
Identities = 18/73 (24%), Positives = 32/73 (43%)
Frame = +2
Query: 290 IQEKLQQAADRRLLIEAEQREKLRNHNIKLAEVRSAATAKVEEITKDIENKLTTAELNRE 469
+ + L D LIE + +R + +K + S + +EE+ KD E+ L +
Sbjct: 327 MSKSLGNVVDPFWLIEKYGVDTIRYYLLKRGRLTSDSNFDIEELEKDEEHDLRRSLGVLL 386
Query: 470 KEIQKKLDFVKKE 508
+Q K F+ E
Sbjct: 387 SRLQSKKLFISNE 399
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,379,660
Number of Sequences: 5004
Number of extensions: 39947
Number of successful extensions: 230
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 201
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 222
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 341222980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -