Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021774
(725 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ439353-9|CAD27931.1| 391|Anopheles gambiae transcription fact... 28 0.34
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein. 27 0.78
AJ439353-11|CAD27933.1| 615|Anopheles gambiae 30E5.11 protein. 27 0.78
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein. 25 3.2
AB090820-1|BAC57915.1| 527|Anopheles gambiae gag-like protein p... 25 3.2
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript... 24 4.2
AB090823-1|BAC57921.1| 429|Anopheles gambiae gag-like protein p... 24 4.2
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi... 24 5.5
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. 24 5.5
AF042732-2|AAC18057.1| 179|Anopheles gambiae TU37B2 protein. 24 5.5
AY390605-1|AAR27302.1| 241|Anopheles gambiae SP22D protein. 23 7.3
AY390604-1|AAR27301.1| 241|Anopheles gambiae SP22D protein. 23 7.3
AY390603-1|AAR27300.1| 241|Anopheles gambiae SP22D protein. 23 7.3
AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22... 23 7.3
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona... 23 9.6
>AJ439353-9|CAD27931.1| 391|Anopheles gambiae transcription factor
protein.
Length = 391
Score = 27.9 bits (59), Expect = 0.34
Identities = 21/81 (25%), Positives = 36/81 (44%)
Frame = +3
Query: 9 LDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAADKRD 188
+D+ ++ + A +SRLK E K + +T E E+ + A
Sbjct: 126 IDSGRKSFRKSTAAKTAATQSRLKQRFEAERKRTRVI--RTEEYIPTQEELLEEAEITER 183
Query: 189 ENLKKMIERLREHEEQVRKVR 251
EN+K + ER R E + +K+R
Sbjct: 184 ENIKSL-ERFRRMELEKQKIR 203
>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
Length = 1133
Score = 26.6 bits (56), Expect = 0.78
Identities = 14/68 (20%), Positives = 38/68 (55%)
Frame = +3
Query: 54 INELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAADKRDENLKKMIERLREHEE 233
++EL+ + E +++ L A+ + +++ MT +R +++KK+ + L +E+
Sbjct: 707 MDELKRHTQQRREQLQRELNELNSAYAKEDERLQE-MTRKLHQRQQHMKKLQQELLTNEQ 765
Query: 234 QVRKVRAV 257
Q++++ V
Sbjct: 766 QLQQLAGV 773
Score = 23.4 bits (48), Expect = 7.3
Identities = 18/87 (20%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Frame = +3
Query: 9 LDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAI---EDKMTTAAD 179
L++ +E+ + +L R + H++ +++ LT EQQ ++ + E + TT +
Sbjct: 728 LNSAYAKEDERLQEMTRKLHQR-QQHMKKLQQELLTNEQQLQQLAGVVFEGETEETTLRE 786
Query: 180 KRDEN---LKKMIERLREHEEQVRKVR 251
+ + + L K+ + + E + ++ +VR
Sbjct: 787 ELEHSRTILAKLQKGIEEEQAKLDQVR 813
>AJ439353-11|CAD27933.1| 615|Anopheles gambiae 30E5.11 protein.
Length = 615
Score = 26.6 bits (56), Expect = 0.78
Identities = 22/89 (24%), Positives = 36/89 (40%)
Frame = +2
Query: 254 RNQEKFQQLESAIQEKLQQAADRRLLIEAEQREKLRNHNIKLAEVRSAATAKVEEITKDI 433
+ E Q E +E L+ + + + +R+ K AE AKVEE +
Sbjct: 96 KETEVLCQQEREFREYLRNGSKKMTSTWENTVQNIRDK--KEAERLRRDKAKVEEDQRHY 153
Query: 434 ENKLTTAELNREKEIQKKLDFVKKESGAP 520
E+ R + IQK D ++K+ P
Sbjct: 154 RELKAADEIKRRELIQKAEDLIQKDKVGP 182
>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
Length = 1229
Score = 24.6 bits (51), Expect = 3.2
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = +3
Query: 12 DAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKM 164
DAK++ HE+ R E+ K + GV + + Q T + Y K+
Sbjct: 496 DAKIDKHEDARRKKKQEVVELFKLEVPGVYDRMINMCQPTHKRYNVAVTKV 546
>AB090820-1|BAC57915.1| 527|Anopheles gambiae gag-like protein
protein.
Length = 527
Score = 24.6 bits (51), Expect = 3.2
Identities = 14/54 (25%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +2
Query: 218 ART*GTSSQGPRRNQEKFQQLESAIQE-KLQQAADRRLLIEAEQREKLRNHNIK 376
A+T G +S +Q++ Q+ + ++ + QQ ++R +E +QR++ R K
Sbjct: 147 AQTLGGTSGARLESQQELQREQELLRRMESQQRQEQRQQLEDQQRQRWRQQQQK 200
>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
protein.
Length = 1209
Score = 24.2 bits (50), Expect = 4.2
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +2
Query: 38 KTRGLHQRAA-LPSQGSS*GC*EDQVDPGTADRGSVQ 145
+TR + +R LP +G+ G PGT DR S+Q
Sbjct: 2 ETRSMRKRTTRLPEEGAPTGA-----GPGTGDRASIQ 33
>AB090823-1|BAC57921.1| 429|Anopheles gambiae gag-like protein
protein.
Length = 429
Score = 24.2 bits (50), Expect = 4.2
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +2
Query: 236 SSQGPRRNQEKFQQLESAIQEKLQQAADRRLLIEAEQREKLR 361
+++ R N+E Q + K Q+ +RR LI E+ EK+R
Sbjct: 16 NARNERINEELTQM--RILMTKQQEYTERRELIAREEMEKMR 55
>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
channel alpha subunitprotein.
Length = 2139
Score = 23.8 bits (49), Expect = 5.5
Identities = 15/60 (25%), Positives = 27/60 (45%)
Frame = +2
Query: 164 DHSCRQA*REPQEDDRASART*GTSSQGPRRNQEKFQQLESAIQEKLQQAADRRLLIEAE 343
DH Q+DD AS ++ G+ P +++ E+ E+ + A+ L I+ E
Sbjct: 1175 DHELNHRGVSLQDDDTASIKSYGSHKNRPFKDESHKGSAETMEGEEKRDASKEDLGIDEE 1234
>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
Length = 1376
Score = 23.8 bits (49), Expect = 5.5
Identities = 13/52 (25%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +2
Query: 341 EQREKLRNHNIKLAEVRSAATAK-VEEITKDIENKLTTAELNREKEIQKKLD 493
EQ ++ N +K+ + + K +++++ +I +KLT E+ +QK D
Sbjct: 885 EQINEITNSKVKVLQTKINGLGKQIDKLSANI-SKLTVEIKTSERNVQKSKD 935
>AF042732-2|AAC18057.1| 179|Anopheles gambiae TU37B2 protein.
Length = 179
Score = 23.8 bits (49), Expect = 5.5
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +3
Query: 117 LEQQTAEVYKAIEDKMTTAADKRDENLKKMIERLRE 224
L+ + + K +E + T + D+N KK IER E
Sbjct: 36 LKGEVEKQSKKLEKRKETLGESLDKNHKKKIERDEE 71
>AY390605-1|AAR27302.1| 241|Anopheles gambiae SP22D protein.
Length = 241
Score = 23.4 bits (48), Expect = 7.3
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = +3
Query: 525 GPAEQERPHRDRGPALLRLERGPP 596
GP +Q++ H+ GP+ + + G P
Sbjct: 20 GPQQQQQQHQQHGPSGPQYQPGVP 43
>AY390604-1|AAR27301.1| 241|Anopheles gambiae SP22D protein.
Length = 241
Score = 23.4 bits (48), Expect = 7.3
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = +3
Query: 525 GPAEQERPHRDRGPALLRLERGPP 596
GP +Q++ H+ GP+ + + G P
Sbjct: 20 GPQQQQQQHQQHGPSGPQYQPGVP 43
>AY390603-1|AAR27300.1| 241|Anopheles gambiae SP22D protein.
Length = 241
Score = 23.4 bits (48), Expect = 7.3
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = +3
Query: 525 GPAEQERPHRDRGPALLRLERGPP 596
GP +Q++ H+ GP+ + + G P
Sbjct: 20 GPQQQQQQHQQHGPSGPQYQPGVP 43
>AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22D
protein.
Length = 1322
Score = 23.4 bits (48), Expect = 7.3
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = +3
Query: 525 GPAEQERPHRDRGPALLRLERGPP 596
GP +Q++ H+ GP+ + + G P
Sbjct: 91 GPQQQQQQHQQHGPSGPQYQPGVP 114
>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
anion exchanger protein.
Length = 1102
Score = 23.0 bits (47), Expect = 9.6
Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +3
Query: 60 ELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAADKRDENLKKMIERLR-EHEEQ 236
ELRS L + ++ ++LEQ V + + + T + RD+ + +++R + +HE
Sbjct: 158 ELRSLLLNGTVMLDMEAVSLEQIAELVCENMVNSGTLPVEARDKVIDALLKRHKHQHEFG 217
Query: 237 VRKVR 251
+K R
Sbjct: 218 SKKSR 222
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 620,964
Number of Sequences: 2352
Number of extensions: 11097
Number of successful extensions: 42
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74012934
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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