Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021772X
         (561 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1 pro...    39   1e-04
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    32   0.015
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    25   2.2  
AJ010193-1|CAA09032.1|  684|Anopheles gambiae prophenoloxidase p...    23   5.2  

>DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1
           protein.
          Length = 545

 Score = 38.7 bits (86), Expect = 1e-04
 Identities = 14/22 (63%), Positives = 17/22 (77%)
 Frame = +1

Query: 463 SVLWFRHGLRLHDNPFFIRRWK 528
           ++LWFRHGLRLHDNP  +   K
Sbjct: 5   NILWFRHGLRLHDNPSLLEALK 26


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 31.9 bits (69), Expect = 0.015
 Identities = 12/15 (80%), Positives = 13/15 (86%)
 Frame = +1

Query: 463 SVLWFRHGLRLHDNP 507
           +V WFR GLRLHDNP
Sbjct: 6   TVHWFRKGLRLHDNP 20


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 24.6 bits (51), Expect = 2.2
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +2

Query: 317 YSMSSAPDNDHSTSLQYKLNDNITLKLS 400
           YS  +  D D ST + YK+  NI   +S
Sbjct: 816 YSRHAVDDRDLSTQVNYKMQMNIRRMIS 843


>AJ010193-1|CAA09032.1|  684|Anopheles gambiae prophenoloxidase
           protein.
          Length = 684

 Score = 23.4 bits (48), Expect = 5.2
 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = -3

Query: 493 DAARDGTTERYRQASIVSPYNYSFRNL-ISSYTQ 395
           +A  +    R  Q+S+  PY  +FRN+  SS TQ
Sbjct: 539 NAGANTIVRRSDQSSVSIPYERTFRNVAASSLTQ 572


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 504,735
Number of Sequences: 2352
Number of extensions: 9143
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52563375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)