Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021772X
         (561 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC113380-1|AAI13381.1| 1147|Homo sapiens KIAA1429 protein.             37   0.042
BC112288-1|AAI12289.1| 1147|Homo sapiens hypothetical protein LO...    37   0.042
AB037850-1|BAA92667.1| 1795|Homo sapiens KIAA1429 protein protein.     37   0.042
EF015899-1|ABM64210.1|  593|Homo sapiens photolyase-like cryptoc...    33   0.69 
BC041814-1|AAH41814.1|  593|Homo sapiens cryptochrome 2 (photoly...    33   0.69 
AB014558-1|BAA31633.1|  589|Homo sapiens KIAA0658 protein protein.     33   0.69 
EF015898-1|ABM64209.1|  586|Homo sapiens photolyase-like cryptoc...    32   1.6  
D84657-1|BAA12710.1|  586|Homo sapiens photolyase homolog protein.     32   1.6  
D83702-1|BAA12068.1|  586|Homo sapiens photolyase protein.             32   1.6  
BC030519-1|AAH30519.1|  586|Homo sapiens cryptochrome 1 (photoly...    32   1.6  

>BC113380-1|AAI13381.1| 1147|Homo sapiens KIAA1429 protein.
          Length = 1147

 Score = 37.1 bits (82), Expect = 0.042
 Identities = 21/59 (35%), Positives = 32/59 (54%)
 Frame = +2

Query: 320 SMSSAPDNDHSTSLQYKLNDNITLKLSITTNQISKRIIVRGYYRCLAVAFCGSVTGCVS 496
           S  SAP  D   SL+Y  N +I  + +   N  +  +++RG+Y CL +A  GSV   +S
Sbjct: 77  SKPSAPVFDRLGSLEYDENTSIIFRPNSKVN--TDGLVLRGWYNCLTLAIYGSVDRVIS 133


>BC112288-1|AAI12289.1| 1147|Homo sapiens hypothetical protein
           LOC25962, isoform 2 protein.
          Length = 1147

 Score = 37.1 bits (82), Expect = 0.042
 Identities = 21/59 (35%), Positives = 32/59 (54%)
 Frame = +2

Query: 320 SMSSAPDNDHSTSLQYKLNDNITLKLSITTNQISKRIIVRGYYRCLAVAFCGSVTGCVS 496
           S  SAP  D   SL+Y  N +I  + +   N  +  +++RG+Y CL +A  GSV   +S
Sbjct: 77  SKPSAPVFDRLGSLEYDENTSIIFRPNSKVN--TDGLVLRGWYNCLTLAIYGSVDRVIS 133


>AB037850-1|BAA92667.1| 1795|Homo sapiens KIAA1429 protein protein.
          Length = 1795

 Score = 37.1 bits (82), Expect = 0.042
 Identities = 21/59 (35%), Positives = 32/59 (54%)
 Frame = +2

Query: 320 SMSSAPDNDHSTSLQYKLNDNITLKLSITTNQISKRIIVRGYYRCLAVAFCGSVTGCVS 496
           S  SAP  D   SL+Y  N +I  + +   N  +  +++RG+Y CL +A  GSV   +S
Sbjct: 75  SKPSAPVFDRLGSLEYDENTSIIFRPNSKVN--TDGLVLRGWYNCLTLAIYGSVDRVIS 131


>EF015899-1|ABM64210.1|  593|Homo sapiens photolyase-like
           cryptochrome 2 protein.
          Length = 593

 Score = 33.1 bits (72), Expect = 0.69
 Identities = 13/15 (86%), Positives = 13/15 (86%)
 Frame = +1

Query: 463 SVLWFRHGLRLHDNP 507
           SV WFR GLRLHDNP
Sbjct: 24  SVHWFRKGLRLHDNP 38


>BC041814-1|AAH41814.1|  593|Homo sapiens cryptochrome 2
           (photolyase-like) protein.
          Length = 593

 Score = 33.1 bits (72), Expect = 0.69
 Identities = 13/15 (86%), Positives = 13/15 (86%)
 Frame = +1

Query: 463 SVLWFRHGLRLHDNP 507
           SV WFR GLRLHDNP
Sbjct: 24  SVHWFRKGLRLHDNP 38


>AB014558-1|BAA31633.1|  589|Homo sapiens KIAA0658 protein protein.
          Length = 589

 Score = 33.1 bits (72), Expect = 0.69
 Identities = 13/15 (86%), Positives = 13/15 (86%)
 Frame = +1

Query: 463 SVLWFRHGLRLHDNP 507
           SV WFR GLRLHDNP
Sbjct: 20  SVHWFRKGLRLHDNP 34


>EF015898-1|ABM64209.1|  586|Homo sapiens photolyase-like
           cryptochrome 1 protein.
          Length = 586

 Score = 31.9 bits (69), Expect = 1.6
 Identities = 12/15 (80%), Positives = 13/15 (86%)
 Frame = +1

Query: 463 SVLWFRHGLRLHDNP 507
           +V WFR GLRLHDNP
Sbjct: 5   AVHWFRKGLRLHDNP 19


>D84657-1|BAA12710.1|  586|Homo sapiens photolyase homolog protein.
          Length = 586

 Score = 31.9 bits (69), Expect = 1.6
 Identities = 12/15 (80%), Positives = 13/15 (86%)
 Frame = +1

Query: 463 SVLWFRHGLRLHDNP 507
           +V WFR GLRLHDNP
Sbjct: 5   AVHWFRKGLRLHDNP 19


>D83702-1|BAA12068.1|  586|Homo sapiens photolyase protein.
          Length = 586

 Score = 31.9 bits (69), Expect = 1.6
 Identities = 12/15 (80%), Positives = 13/15 (86%)
 Frame = +1

Query: 463 SVLWFRHGLRLHDNP 507
           +V WFR GLRLHDNP
Sbjct: 5   AVHWFRKGLRLHDNP 19


>BC030519-1|AAH30519.1|  586|Homo sapiens cryptochrome 1
           (photolyase-like) protein.
          Length = 586

 Score = 31.9 bits (69), Expect = 1.6
 Identities = 12/15 (80%), Positives = 13/15 (86%)
 Frame = +1

Query: 463 SVLWFRHGLRLHDNP 507
           +V WFR GLRLHDNP
Sbjct: 5   AVHWFRKGLRLHDNP 19


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,973,409
Number of Sequences: 237096
Number of extensions: 1176769
Number of successful extensions: 2110
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2060
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2110
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5646880600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)