Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021772X
         (561 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051514-1|AAK92938.1|  542|Drosophila melanogaster GH16672p pro...    40   0.002
AF099734-1|AAC83828.1|  542|Drosophila melanogaster cryptochrome...    40   0.002
AE014297-2641|AAF55649.1|  542|Drosophila melanogaster CG3772-PA...    40   0.002
AB019389-1|BAA35000.1|  542|Drosophila melanogaster blue light p...    40   0.002
AB018400-1|BAA33787.1|  542|Drosophila melanogaster blue-light r...    40   0.002
D83701-1|BAA12067.1|  540|Drosophila melanogaster photolyase pro...    31   0.81 
AY089584-1|AAL90322.1|  540|Drosophila melanogaster RE11660p pro...    31   0.81 
AE014134-3257|AAF53904.1|  540|Drosophila melanogaster CG2488-PB...    31   0.81 
AE014134-3256|AAN11080.1|  540|Drosophila melanogaster CG2488-PA...    31   0.81 

>AY051514-1|AAK92938.1|  542|Drosophila melanogaster GH16672p
           protein.
          Length = 542

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 14/17 (82%), Positives = 16/17 (94%)
 Frame = +1

Query: 457 GGSVLWFRHGLRLHDNP 507
           G +V+WFRHGLRLHDNP
Sbjct: 5   GANVIWFRHGLRLHDNP 21


>AF099734-1|AAC83828.1|  542|Drosophila melanogaster cryptochrome
           protein.
          Length = 542

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 14/17 (82%), Positives = 16/17 (94%)
 Frame = +1

Query: 457 GGSVLWFRHGLRLHDNP 507
           G +V+WFRHGLRLHDNP
Sbjct: 5   GANVIWFRHGLRLHDNP 21


>AE014297-2641|AAF55649.1|  542|Drosophila melanogaster CG3772-PA
           protein.
          Length = 542

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 14/17 (82%), Positives = 16/17 (94%)
 Frame = +1

Query: 457 GGSVLWFRHGLRLHDNP 507
           G +V+WFRHGLRLHDNP
Sbjct: 5   GANVIWFRHGLRLHDNP 21


>AB019389-1|BAA35000.1|  542|Drosophila melanogaster blue light
           photoreceptor protein.
          Length = 542

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 14/17 (82%), Positives = 16/17 (94%)
 Frame = +1

Query: 457 GGSVLWFRHGLRLHDNP 507
           G +V+WFRHGLRLHDNP
Sbjct: 5   GANVIWFRHGLRLHDNP 21


>AB018400-1|BAA33787.1|  542|Drosophila melanogaster blue-light
           receptor protein.
          Length = 542

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 14/17 (82%), Positives = 16/17 (94%)
 Frame = +1

Query: 457 GGSVLWFRHGLRLHDNP 507
           G +V+WFRHGLRLHDNP
Sbjct: 5   GANVIWFRHGLRLHDNP 21


>D83701-1|BAA12067.1|  540|Drosophila melanogaster photolyase
           protein.
          Length = 540

 Score = 31.5 bits (68), Expect = 0.81
 Identities = 12/14 (85%), Positives = 12/14 (85%)
 Frame = +1

Query: 466 VLWFRHGLRLHDNP 507
           V WFR GLRLHDNP
Sbjct: 9   VHWFRKGLRLHDNP 22


>AY089584-1|AAL90322.1|  540|Drosophila melanogaster RE11660p
           protein.
          Length = 540

 Score = 31.5 bits (68), Expect = 0.81
 Identities = 12/14 (85%), Positives = 12/14 (85%)
 Frame = +1

Query: 466 VLWFRHGLRLHDNP 507
           V WFR GLRLHDNP
Sbjct: 9   VHWFRKGLRLHDNP 22


>AE014134-3257|AAF53904.1|  540|Drosophila melanogaster CG2488-PB,
           isoform B protein.
          Length = 540

 Score = 31.5 bits (68), Expect = 0.81
 Identities = 12/14 (85%), Positives = 12/14 (85%)
 Frame = +1

Query: 466 VLWFRHGLRLHDNP 507
           V WFR GLRLHDNP
Sbjct: 9   VHWFRKGLRLHDNP 22


>AE014134-3256|AAN11080.1|  540|Drosophila melanogaster CG2488-PA,
           isoform A protein.
          Length = 540

 Score = 31.5 bits (68), Expect = 0.81
 Identities = 12/14 (85%), Positives = 12/14 (85%)
 Frame = +1

Query: 466 VLWFRHGLRLHDNP 507
           V WFR GLRLHDNP
Sbjct: 9   VHWFRKGLRLHDNP 22


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,638,030
Number of Sequences: 53049
Number of extensions: 352766
Number of successful extensions: 642
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 637
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 642
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2172596895
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)