Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021772X
         (561 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68317-2|CAA92690.2|  980|Caenorhabditis elegans Hypothetical pr...    31   0.43 
Z81029-2|CAB02696.1|  220|Caenorhabditis elegans Hypothetical pr...    30   1.3  
AF016451-9|AAB66005.2|  524|Caenorhabditis elegans Udp-glucurono...    27   7.0  
Z22181-9|CAA80186.1|  453|Caenorhabditis elegans Hypothetical pr...    27   9.2  
AF016682-3|AAB66186.2|  308|Caenorhabditis elegans Hypothetical ...    27   9.2  

>Z68317-2|CAA92690.2|  980|Caenorhabditis elegans Hypothetical
           protein T01H3.2 protein.
          Length = 980

 Score = 31.5 bits (68), Expect = 0.43
 Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
 Frame = +2

Query: 317 YSMSSA--PDNDHSTSLQYKLNDNITLKLSITTNQISKRIIVRGYYRCLAVAFCGSVTG 487
           YS+SS   P + HST+  YK+ D ITLK+     +  K  + RG+     ++F GS  G
Sbjct: 641 YSLSSNYNPLSSHSTTHDYKMTDQITLKMF----EYQKHAVFRGF-----ISFQGSQKG 690


>Z81029-2|CAB02696.1|  220|Caenorhabditis elegans Hypothetical
           protein C01A2.2 protein.
          Length = 220

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = +2

Query: 440 GYYRCLAVAFCGSVTGCVSTTIRSSFGVGRNERPFLSH 553
           G Y   A+ F  ++  CVS ++  S G GRN  PF+ H
Sbjct: 63  GSYIACAIGFAVTIAFCVSYSLFHSRGQGRN--PFIDH 98


>AF016451-9|AAB66005.2|  524|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein51 protein.
          Length = 524

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 18/45 (40%), Positives = 21/45 (46%)
 Frame = -2

Query: 560 NENGKERAARFFQRRMKNGLSWRRSP*RNHRTLPPSIYSIPLQLF 426
           NEN K  A RF+    KNG SW +    NH T P      P+  F
Sbjct: 67  NENSK--ADRFYTLGFKNGSSWHK---LNHLTSPFENNPFPIDGF 106


>Z22181-9|CAA80186.1|  453|Caenorhabditis elegans Hypothetical
           protein ZK632.11 protein.
          Length = 453

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = -1

Query: 549 ERKGRSFLPTPNEERIVVETQPVTEPQNA-TAKH 451
           E +  +F+P P EE I+V T  ++   N+ TAK+
Sbjct: 406 EIRENNFVPEPEEEVILVSTNEISSSNNSGTAKN 439


>AF016682-3|AAB66186.2|  308|Caenorhabditis elegans Hypothetical
           protein T07D3.6 protein.
          Length = 308

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 10/20 (50%), Positives = 17/20 (85%)
 Frame = +2

Query: 317 YSMSSAPDNDHSTSLQYKLN 376
           ++MS+AP++ H TSL YK++
Sbjct: 7   HNMSAAPNDQHVTSLCYKMS 26


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,977,482
Number of Sequences: 27780
Number of extensions: 196851
Number of successful extensions: 491
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 482
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 491
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1155524042
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)