Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021771X
         (610 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q3KG09 Cluster: Putative uncharacterized protein; n=1; ...    35   1.3  
UniRef50_Q6C1W8 Cluster: Similarities with sp|P50111 Saccharomyc...    33   7.0  
UniRef50_A0YQC4 Cluster: Putative uncharacterized protein; n=1; ...    32   9.3  
UniRef50_Q2H5X9 Cluster: Putative uncharacterized protein; n=1; ...    32   9.3  

>UniRef50_Q3KG09 Cluster: Putative uncharacterized protein; n=1;
           Pseudomonas fluorescens PfO-1|Rep: Putative
           uncharacterized protein - Pseudomonas fluorescens
           (strain PfO-1)
          Length = 634

 Score = 35.1 bits (77), Expect = 1.3
 Identities = 22/74 (29%), Positives = 31/74 (41%)
 Frame = +2

Query: 218 STSLFYRVRTDIGKSYSWGDVQLE*TTEQSRETFERVVLIERIIEV*CAECGDRRCEEQA 397
           +T   + VRT  GK Y+WG+           +     + +ERII    A C   R  E  
Sbjct: 284 ATENAFAVRTQNGKVYAWGNPNNGGAINADAQVQLDSIFVERIIAAAAAFCAIGRNGEIV 343

Query: 398 RWGRARCLGWVGGG 439
            WG+A   G +  G
Sbjct: 344 TWGKAADGGAIPSG 357


>UniRef50_Q6C1W8 Cluster: Similarities with sp|P50111 Saccharomyces
           cerevisiae ZDS1 protein; n=1; Yarrowia lipolytica|Rep:
           Similarities with sp|P50111 Saccharomyces cerevisiae
           ZDS1 protein - Yarrowia lipolytica (Candida lipolytica)
          Length = 1437

 Score = 32.7 bits (71), Expect = 7.0
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -3

Query: 461 PHPAPGTHHPRPTRGTSLAPSAPALRTDGH 372
           P+P P   HP P +G    P  PA R+ GH
Sbjct: 773 PYPGPSGQHPAPHQGHQGGPYPPAHRSRGH 802


>UniRef50_A0YQC4 Cluster: Putative uncharacterized protein; n=1;
           Lyngbya sp. PCC 8106|Rep: Putative uncharacterized
           protein - Lyngbya sp. PCC 8106
          Length = 406

 Score = 32.3 bits (70), Expect = 9.3
 Identities = 13/23 (56%), Positives = 14/23 (60%)
 Frame = -3

Query: 461 PHPAPGTHHPRPTRGTSLAPSAP 393
           P PAP T  P PT G SL P +P
Sbjct: 258 PIPAPATQTPTPTNGQSLTPPSP 280


>UniRef50_Q2H5X9 Cluster: Putative uncharacterized protein; n=1;
           Chaetomium globosum|Rep: Putative uncharacterized
           protein - Chaetomium globosum (Soil fungus)
          Length = 837

 Score = 32.3 bits (70), Expect = 9.3
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = -3

Query: 455 PAPGTHHPRPTRGTSLAPSAPALRTDGHRTR 363
           P P TH+  P+RG S+ P  P+L T   R R
Sbjct: 404 PLPNTHNAAPSRGQSVIPPNPSLATITSRRR 434


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 493,619,318
Number of Sequences: 1657284
Number of extensions: 8132778
Number of successful extensions: 23568
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 22546
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23535
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43562448615
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)