Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021771X
         (610 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.        26   1.1  
AF043439-1|AAC05664.1|  239|Anopheles gambiae putative pupal-spe...    23   7.7  
AF043433-2|AAC05657.1|  239|Anopheles gambiae putative pupal-spe...    23   7.7  

>DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.
          Length = 494

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 14/27 (51%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
 Frame = -3

Query: 455 PAPGTHHPRPTRGTSLAPS-APALRTD 378
           PAP T  PRP    + APS  PAL  D
Sbjct: 57  PAPSTVRPRPPAPPTNAPSQLPALTPD 83


>AF043439-1|AAC05664.1|  239|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 239

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -1

Query: 385 APTVTALGTSHLYNPLYQHDS 323
           APT+  +G+ H    +YQH +
Sbjct: 40  APTIQHVGSVHAAPAIYQHSA 60


>AF043433-2|AAC05657.1|  239|Anopheles gambiae putative
           pupal-specific cuticular proteinprotein.
          Length = 239

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -1

Query: 385 APTVTALGTSHLYNPLYQHDS 323
           APT+  +G+ H    +YQH +
Sbjct: 40  APTIQHVGSVHAAPAIYQHSA 60


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 532,500
Number of Sequences: 2352
Number of extensions: 9103
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 59291487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)