Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021771X
         (610 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82274-16|CAC70096.1| 1119|Caenorhabditis elegans Hypothetical p...    28   6.0  
Z82274-15|CAB05234.2| 1113|Caenorhabditis elegans Hypothetical p...    28   6.0  
AL132951-13|CAC70127.1| 1119|Caenorhabditis elegans Hypothetical...    28   6.0  
AL132951-12|CAC44311.1| 1113|Caenorhabditis elegans Hypothetical...    28   6.0  
AF283323-1|AAG18575.1| 1113|Caenorhabditis elegans synaptojanin ...    28   6.0  
AF283322-1|AAG18574.1| 1119|Caenorhabditis elegans synaptojanin ...    28   6.0  

>Z82274-16|CAC70096.1| 1119|Caenorhabditis elegans Hypothetical
            protein JC8.10b protein.
          Length = 1119

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = -3

Query: 461  PHPAPGTHHPRPTRGTSLAPSAPAL 387
            P P P T    PTRG S+ P  PA+
Sbjct: 1074 PAPPPSTIPLPPTRGASVGPGPPAV 1098


>Z82274-15|CAB05234.2| 1113|Caenorhabditis elegans Hypothetical
            protein JC8.10a protein.
          Length = 1113

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = -3

Query: 461  PHPAPGTHHPRPTRGTSLAPSAPAL 387
            P P P T    PTRG S+ P  PA+
Sbjct: 1068 PAPPPSTIPLPPTRGASVGPGPPAV 1092


>AL132951-13|CAC70127.1| 1119|Caenorhabditis elegans Hypothetical
            protein JC8.10b protein.
          Length = 1119

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = -3

Query: 461  PHPAPGTHHPRPTRGTSLAPSAPAL 387
            P P P T    PTRG S+ P  PA+
Sbjct: 1074 PAPPPSTIPLPPTRGASVGPGPPAV 1098


>AL132951-12|CAC44311.1| 1113|Caenorhabditis elegans Hypothetical
            protein JC8.10a protein.
          Length = 1113

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = -3

Query: 461  PHPAPGTHHPRPTRGTSLAPSAPAL 387
            P P P T    PTRG S+ P  PA+
Sbjct: 1068 PAPPPSTIPLPPTRGASVGPGPPAV 1092


>AF283323-1|AAG18575.1| 1113|Caenorhabditis elegans synaptojanin
            UNC-26B protein.
          Length = 1113

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = -3

Query: 461  PHPAPGTHHPRPTRGTSLAPSAPAL 387
            P P P T    PTRG S+ P  PA+
Sbjct: 1068 PAPPPSTIPLPPTRGASVGPGPPAV 1092


>AF283322-1|AAG18574.1| 1119|Caenorhabditis elegans synaptojanin
            UNC-26A protein.
          Length = 1119

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = -3

Query: 461  PHPAPGTHHPRPTRGTSLAPSAPAL 387
            P P P T    PTRG S+ P  PA+
Sbjct: 1074 PAPPPSTIPLPPTRGASVGPGPPAV 1098


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,389,438
Number of Sequences: 27780
Number of extensions: 194262
Number of successful extensions: 499
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 484
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 499
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)