Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021771X
         (610 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g63650.1 68418.m07991 serine/threonine protein kinase, putati...    28   4.2  
At5g54650.2 68418.m06805 formin homology 2 domain-containing pro...    28   5.6  
At5g54650.1 68418.m06804 formin homology 2 domain-containing pro...    28   5.6  
At5g08590.1 68418.m01022 serine/threonine protein kinase (ASK2) ...    28   5.6  
At4g28810.1 68417.m04119 expressed protein PMID: 12679534, putat...    27   7.4  
At3g14090.1 68416.m01781 exocyst subunit EXO70 family protein  c...    27   9.7  

>At5g63650.1 68418.m07991 serine/threonine protein kinase, putative
           similar to serine/threonine-protein kinase
           ASK2[Arabidopsis thaliana], SWISS-PROT:P43292; contains
           protein kinase domain, Pfam:PF00069
          Length = 360

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 18/51 (35%), Positives = 23/51 (45%)
 Frame = -1

Query: 388 FAPTVTALGTSHLYNPLYQHDSFECFT*LLSSLFQLHIAPRIAFSNIRPHP 236
           F  T+  +       P Y H S EC   LLS +F  + A RI    I+ HP
Sbjct: 209 FRKTIQRIMAVQYKIPDYVHISQECRH-LLSRIFVTNSAKRITLKEIKKHP 258


>At5g54650.2 68418.m06805 formin homology 2 domain-containing
           protein / FH2 domain-containing protein contains formin
           homology 2 domain, Pfam:PF02181
          Length = 900

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 12/23 (52%), Positives = 12/23 (52%)
 Frame = -3

Query: 461 PHPAPGTHHPRPTRGTSLAPSAP 393
           P P PG   PRP    SL P AP
Sbjct: 402 PPPPPGPKGPRPPPPMSLGPKAP 424


>At5g54650.1 68418.m06804 formin homology 2 domain-containing
           protein / FH2 domain-containing protein contains formin
           homology 2 domain, Pfam:PF02181
          Length = 900

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 12/23 (52%), Positives = 12/23 (52%)
 Frame = -3

Query: 461 PHPAPGTHHPRPTRGTSLAPSAP 393
           P P PG   PRP    SL P AP
Sbjct: 402 PPPPPGPKGPRPPPPMSLGPKAP 424


>At5g08590.1 68418.m01022 serine/threonine protein kinase (ASK2)
           identical to serine/threonine-protein kinase ASK2,
           SWISS-PROT: P43292; contains protein kinase domain,
           Pfam:PF00069
          Length = 353

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 18/51 (35%), Positives = 23/51 (45%)
 Frame = -1

Query: 388 FAPTVTALGTSHLYNPLYQHDSFECFT*LLSSLFQLHIAPRIAFSNIRPHP 236
           F  T+  +       P Y H S EC   LLS +F  + A RI    I+ HP
Sbjct: 209 FRKTIQRIMAVQYKIPDYVHISQECKH-LLSRIFVTNSAKRITLKEIKNHP 258


>At4g28810.1 68417.m04119 expressed protein PMID: 12679534, putative
           bHLH127 transcription factor
          Length = 880

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = -3

Query: 455 PAPGTHHPRPTRGTSLAPSAPALR 384
           P PG   PRP     + PS PALR
Sbjct: 487 PFPGKTFPRPGHMAGVGPSYPALR 510


>At3g14090.1 68416.m01781 exocyst subunit EXO70 family protein
           contains Pfam domain PF03081: Exo70 exocyst complex
           subunit;
          Length = 623

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +1

Query: 520 VQRDERAPRTRFMITDHS*RAATGSLAH 603
           VQ+ +R+P  R MI DH  R  TG   H
Sbjct: 467 VQKVKRSPELREMIGDHYLRKLTGIFRH 494


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,605,275
Number of Sequences: 28952
Number of extensions: 177051
Number of successful extensions: 494
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 474
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 492
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1216725696
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)