Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021769
(659 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50109-4|CAA90441.1| 382|Caenorhabditis elegans Hypothetical pr... 38 0.005
AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily a... 29 2.9
Z69664-11|CAA93518.2| 1479|Caenorhabditis elegans Hypothetical p... 28 5.1
AL022716-7|CAA18775.2| 1479|Caenorhabditis elegans Hypothetical ... 28 5.1
AL021570-1|CAA16510.2| 1479|Caenorhabditis elegans Hypothetical ... 28 5.1
AC006768-3|AAK70665.1| 246|Caenorhabditis elegans Hypothetical ... 28 5.1
AC006768-2|AAF60574.1| 309|Caenorhabditis elegans Hypothetical ... 28 5.1
AF100657-4|AAK70655.2| 261|Caenorhabditis elegans Hypothetical ... 28 6.8
Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical p... 27 8.9
Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical p... 27 8.9
Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical p... 27 8.9
U50301-13|AAB37054.2| 549|Caenorhabditis elegans Hypothetical p... 27 8.9
U39854-1|AAA81076.2| 236|Caenorhabditis elegans Hypothetical pr... 27 8.9
AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical ... 27 8.9
>Z50109-4|CAA90441.1| 382|Caenorhabditis elegans Hypothetical
protein C09H10.6 protein.
Length = 382
Score = 38.3 bits (85), Expect = 0.005
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Frame = +1
Query: 121 DMIEVSTATPAELLGAGRRHLAVRDFNSAAEVLAKACELLAKEHGT--QRTSVLRHIYGM 294
+ +E AELL AGRR L V D + A++ L++A EL ++ +G + T + YGM
Sbjct: 33 ETVEQKEKRLAELLAAGRRALKVNDIDKASDSLSEATELSSEIYGENHENTFDSLYYYGM 92
Query: 295 A 297
A
Sbjct: 93 A 93
>AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily
assigned gene nameprotein 192 protein.
Length = 2957
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +2
Query: 512 AELKPAQSTTSDAPGASSEVTDNAEPSTSNDDAN 613
A ++P+QS AP + +++ + PSTS+ N
Sbjct: 575 ASMEPSQSVDQSAPPSQAQIPATSTPSTSSQQQN 608
>Z69664-11|CAA93518.2| 1479|Caenorhabditis elegans Hypothetical
protein C24F3.5 protein.
Length = 1479
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = -2
Query: 517 LSFFVDVSASIEVDSASLCSVLLFSGSQF 431
L+ F++ S+E +S ++ S++LF G+QF
Sbjct: 1064 LAAFLNAGESLEKNSGTITSLILFCGAQF 1092
>AL022716-7|CAA18775.2| 1479|Caenorhabditis elegans Hypothetical
protein C24F3.5 protein.
Length = 1479
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = -2
Query: 517 LSFFVDVSASIEVDSASLCSVLLFSGSQF 431
L+ F++ S+E +S ++ S++LF G+QF
Sbjct: 1064 LAAFLNAGESLEKNSGTITSLILFCGAQF 1092
>AL021570-1|CAA16510.2| 1479|Caenorhabditis elegans Hypothetical
protein C24F3.5 protein.
Length = 1479
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = -2
Query: 517 LSFFVDVSASIEVDSASLCSVLLFSGSQF 431
L+ F++ S+E +S ++ S++LF G+QF
Sbjct: 1064 LAAFLNAGESLEKNSGTITSLILFCGAQF 1092
>AC006768-3|AAK70665.1| 246|Caenorhabditis elegans Hypothetical
protein Y45G12B.2b protein.
Length = 246
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/44 (31%), Positives = 18/44 (40%)
Frame = +2
Query: 524 PAQSTTSDAPGASSEVTDNAEPSTSNDDANDESVVNMGSEDDVD 655
P + S P E+ D A S SN+D N G+E D
Sbjct: 100 PVHNNRSSTPATHLEMEDTASYSVSNNDVTFARKKNYGAESSSD 143
>AC006768-2|AAF60574.1| 309|Caenorhabditis elegans Hypothetical
protein Y45G12B.2a protein.
Length = 309
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/44 (31%), Positives = 18/44 (40%)
Frame = +2
Query: 524 PAQSTTSDAPGASSEVTDNAEPSTSNDDANDESVVNMGSEDDVD 655
P + S P E+ D A S SN+D N G+E D
Sbjct: 163 PVHNNRSSTPATHLEMEDTASYSVSNNDVTFARKKNYGAESSSD 206
>AF100657-4|AAK70655.2| 261|Caenorhabditis elegans Hypothetical
protein F52C12.2 protein.
Length = 261
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/38 (34%), Positives = 16/38 (42%)
Frame = +2
Query: 542 SDAPGASSEVTDNAEPSTSNDDANDESVVNMGSEDDVD 655
+D P V + E +D DES GSED D
Sbjct: 14 ADKPPKERNVEEEVETEEEEEDIEDESTSEPGSEDSDD 51
>Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical protein
F07A11.6e protein.
Length = 2101
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +2
Query: 521 KPAQSTTSDAPGASSEVTDNAEPSTSNDDANDESV 625
K + S D+ SS + +++ STS+DD++D+ V
Sbjct: 1262 KNSSSGQHDSSSGSSSDSSSSDGSTSSDDSSDDEV 1296
>Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical protein
F07A11.6c protein.
Length = 2392
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +2
Query: 521 KPAQSTTSDAPGASSEVTDNAEPSTSNDDANDESV 625
K + S D+ SS + +++ STS+DD++D+ V
Sbjct: 1553 KNSSSGQHDSSSGSSSDSSSSDGSTSSDDSSDDEV 1587
>Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical protein
F07A11.6b protein.
Length = 2407
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +2
Query: 521 KPAQSTTSDAPGASSEVTDNAEPSTSNDDANDESV 625
K + S D+ SS + +++ STS+DD++D+ V
Sbjct: 1568 KNSSSGQHDSSSGSSSDSSSSDGSTSSDDSSDDEV 1602
>Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +2
Query: 521 KPAQSTTSDAPGASSEVTDNAEPSTSNDDANDESV 625
K + S D+ SS + +++ STS+DD++D+ V
Sbjct: 1262 KNSSSGQHDSSSGSSSDSSSSDGSTSSDDSSDDEV 1296
>Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +2
Query: 521 KPAQSTTSDAPGASSEVTDNAEPSTSNDDANDESV 625
K + S D+ SS + +++ STS+DD++D+ V
Sbjct: 1553 KNSSSGQHDSSSGSSSDSSSSDGSTSSDDSSDDEV 1587
>Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +2
Query: 521 KPAQSTTSDAPGASSEVTDNAEPSTSNDDANDESV 625
K + S D+ SS + +++ STS+DD++D+ V
Sbjct: 1568 KNSSSGQHDSSSGSSSDSSSSDGSTSSDDSSDDEV 1602
>U50301-13|AAB37054.2| 549|Caenorhabditis elegans Hypothetical
protein F20D6.11 protein.
Length = 549
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3
Query: 300 LGHTINMPQHTGPLCPMFFSQQFTSFGQYFS 208
LG+TI GP+ P F++ F +FG FS
Sbjct: 446 LGYTIVGKPQPGPIVPYFWTLFFFAFGLKFS 476
>U39854-1|AAA81076.2| 236|Caenorhabditis elegans Hypothetical
protein W06B11.3 protein.
Length = 236
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/51 (27%), Positives = 26/51 (50%)
Frame = +2
Query: 503 NKEAELKPAQSTTSDAPGASSEVTDNAEPSTSNDDANDESVVNMGSEDDVD 655
++ ELK S D P + + A+P T ND+ + + ++ ++DVD
Sbjct: 171 SRNRELKVKNSARVDRPPMVAPLAPEAQPKTRNDNFPNPN-FSISDDEDVD 220
>AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical
protein H43E16.1 protein.
Length = 1203
Score = 27.5 bits (58), Expect = 8.9
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +2
Query: 533 STTSDAPGASSEVTDNAEPSTSNDDANDESVVNMGS 640
STTS +SS++T +PS S+ S VN GS
Sbjct: 683 STTSPVASSSSQMTSTQQPSGSSSSIG--STVNQGS 716
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,486,120
Number of Sequences: 27780
Number of extensions: 257154
Number of successful extensions: 1007
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 915
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1004
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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