Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021768X
(574 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X73079-1|CAA51532.1| 764|Homo sapiens Polymeric immunoglobulin ... 29 8.8
U91641-1|AAC51727.1| 376|Homo sapiens alpha2,8-sialyltransferas... 29 8.8
S62403-1|AAB20203.1| 764|Homo sapiens transmembrane secretory c... 29 8.8
S43449-1|AAB23176.1| 764|Homo sapiens transmembrane secretory c... 29 8.8
M24559-1|AAA36102.1| 693|Homo sapiens poly-Ig receptor protein. 29 8.8
CR457037-1|CAG33318.1| 376|Homo sapiens ete cds, incl. stopcodo... 29 8.8
BC110495-1|AAI10496.1| 764|Homo sapiens polymeric immunoglobuli... 29 8.8
BC110494-1|AAI10495.1| 764|Homo sapiens polymeric immunoglobuli... 29 8.8
BC108911-1|AAI08912.1| 376|Homo sapiens ST8 alpha-N-acetyl-neur... 29 8.8
BC108910-1|AAI08911.1| 376|Homo sapiens ST8 alpha-N-acetyl-neur... 29 8.8
AF272149-1|AAN65630.1| 764|Homo sapiens hepatocellular carcinom... 29 8.8
>X73079-1|CAA51532.1| 764|Homo sapiens Polymeric immunoglobulin
receptor protein.
Length = 764
Score = 29.5 bits (63), Expect = 8.8
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -3
Query: 479 IYTGSSRSVRVRCSAGPGPAAVASHVCRSGSNFRCLLLQN 360
+Y SV C+ GP A VA +CR S C ++ N
Sbjct: 245 VYEDLRGSVTFHCALGPEVANVAKFLCRQSSGENCDVVVN 284
>U91641-1|AAC51727.1| 376|Homo sapiens alpha2,8-sialyltransferase
protein.
Length = 376
Score = 29.5 bits (63), Expect = 8.8
Identities = 23/71 (32%), Positives = 35/71 (49%)
Frame = +2
Query: 95 DGVVCGRSVRRARFYSLQLLQKPGSTIHQVAELSSIWALPFYMTLARYSETSVRARRVVG 274
D V S+ RF+ L+ ++P + QV E +S+ FY T R ++ S+R +
Sbjct: 209 DVVTVNPSIITERFHKLEKWRRPFYRVLQVYENASVLLPAFYNT--RNTDVSIRVKY--- 263
Query: 275 VLPQEERPPAV 307
VL E P AV
Sbjct: 264 VLDDFESPQAV 274
>S62403-1|AAB20203.1| 764|Homo sapiens transmembrane secretory
component protein.
Length = 764
Score = 29.5 bits (63), Expect = 8.8
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -3
Query: 479 IYTGSSRSVRVRCSAGPGPAAVASHVCRSGSNFRCLLLQN 360
+Y SV C+ GP A VA +CR S C ++ N
Sbjct: 245 VYEDLRGSVTFHCALGPEVANVAKFLCRQSSGENCDVVVN 284
>S43449-1|AAB23176.1| 764|Homo sapiens transmembrane secretory
component protein.
Length = 764
Score = 29.5 bits (63), Expect = 8.8
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -3
Query: 479 IYTGSSRSVRVRCSAGPGPAAVASHVCRSGSNFRCLLLQN 360
+Y SV C+ GP A VA +CR S C ++ N
Sbjct: 245 VYEDLRGSVTFHCALGPEVANVAKFLCRQSSGENCDVVVN 284
>M24559-1|AAA36102.1| 693|Homo sapiens poly-Ig receptor protein.
Length = 693
Score = 29.5 bits (63), Expect = 8.8
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -3
Query: 479 IYTGSSRSVRVRCSAGPGPAAVASHVCRSGSNFRCLLLQN 360
+Y SV C+ GP A VA +CR S C ++ N
Sbjct: 174 VYEDLRGSVTFHCALGPEVANVAKFLCRQSSGENCDVVVN 213
>CR457037-1|CAG33318.1| 376|Homo sapiens ete cds, incl. stopcodon.
protein.
Length = 376
Score = 29.5 bits (63), Expect = 8.8
Identities = 23/71 (32%), Positives = 35/71 (49%)
Frame = +2
Query: 95 DGVVCGRSVRRARFYSLQLLQKPGSTIHQVAELSSIWALPFYMTLARYSETSVRARRVVG 274
D V S+ RF+ L+ ++P + QV E +S+ FY T R ++ S+R +
Sbjct: 209 DVVTVNPSIITERFHKLEKWRRPFYRVLQVYENASVLLPAFYNT--RNTDVSIRVKY--- 263
Query: 275 VLPQEERPPAV 307
VL E P AV
Sbjct: 264 VLDDFESPQAV 274
>BC110495-1|AAI10496.1| 764|Homo sapiens polymeric immunoglobulin
receptor protein.
Length = 764
Score = 29.5 bits (63), Expect = 8.8
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -3
Query: 479 IYTGSSRSVRVRCSAGPGPAAVASHVCRSGSNFRCLLLQN 360
+Y SV C+ GP A VA +CR S C ++ N
Sbjct: 245 VYEDLRGSVTFHCALGPEVANVAKFLCRQSSGENCDVVVN 284
>BC110494-1|AAI10495.1| 764|Homo sapiens polymeric immunoglobulin
receptor protein.
Length = 764
Score = 29.5 bits (63), Expect = 8.8
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -3
Query: 479 IYTGSSRSVRVRCSAGPGPAAVASHVCRSGSNFRCLLLQN 360
+Y SV C+ GP A VA +CR S C ++ N
Sbjct: 245 VYEDLRGSVTFHCALGPEVANVAKFLCRQSSGENCDVVVN 284
>BC108911-1|AAI08912.1| 376|Homo sapiens ST8
alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5
protein.
Length = 376
Score = 29.5 bits (63), Expect = 8.8
Identities = 23/71 (32%), Positives = 35/71 (49%)
Frame = +2
Query: 95 DGVVCGRSVRRARFYSLQLLQKPGSTIHQVAELSSIWALPFYMTLARYSETSVRARRVVG 274
D V S+ RF+ L+ ++P + QV E +S+ FY T R ++ S+R +
Sbjct: 209 DVVTVNPSIITERFHKLEKWRRPFYRVLQVYENASVLLPAFYNT--RNTDVSIRVKY--- 263
Query: 275 VLPQEERPPAV 307
VL E P AV
Sbjct: 264 VLDDFESPQAV 274
>BC108910-1|AAI08911.1| 376|Homo sapiens ST8
alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5
protein.
Length = 376
Score = 29.5 bits (63), Expect = 8.8
Identities = 23/71 (32%), Positives = 35/71 (49%)
Frame = +2
Query: 95 DGVVCGRSVRRARFYSLQLLQKPGSTIHQVAELSSIWALPFYMTLARYSETSVRARRVVG 274
D V S+ RF+ L+ ++P + QV E +S+ FY T R ++ S+R +
Sbjct: 209 DVVTVNPSIITERFHKLEKWRRPFYRVLQVYENASVLLPAFYNT--RNTDVSIRVKY--- 263
Query: 275 VLPQEERPPAV 307
VL E P AV
Sbjct: 264 VLDDFESPQAV 274
>AF272149-1|AAN65630.1| 764|Homo sapiens hepatocellular carcinoma
associated protein TB6 protein.
Length = 764
Score = 29.5 bits (63), Expect = 8.8
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -3
Query: 479 IYTGSSRSVRVRCSAGPGPAAVASHVCRSGSNFRCLLLQN 360
+Y SV C+ GP A VA +CR S C ++ N
Sbjct: 245 VYEDLRGSVTFHCALGPEVANVAKFLCRQSSGENCDVVVN 284
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,494,266
Number of Sequences: 237096
Number of extensions: 1710725
Number of successful extensions: 2884
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2776
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2884
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5872755824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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