Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021767
         (647 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF510715-1|AAP47144.1|  470|Anopheles gambiae Rh-like glycoprote...    27   0.39 
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    25   1.6  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    24   3.6  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    23   6.3  

>AF510715-1|AAP47144.1|  470|Anopheles gambiae Rh-like glycoprotein
           protein.
          Length = 470

 Score = 27.5 bits (58), Expect = 0.39
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -2

Query: 589 GDVTVHV*GTHFGRVVGFCLLP 524
           G +TVH  G +FG  V F L P
Sbjct: 178 GSITVHAFGAYFGLAVSFMLRP 199


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 15/62 (24%), Positives = 25/62 (40%)
 Frame = +2

Query: 440 HCTAHGHSCSNQCKYQVKIVNYLITCK*RKQTKPNNPSKMGSLNVNRNVSDAFYRYKMPR 619
           HC+         C +   ++   + C   ++ KPN P    +L   + V  A YR+   R
Sbjct: 369 HCSNFISLDEAVCSFSSFMLQAFVVCVPVQRPKPNPPWADRTLKRLKRVKRAAYRHYQTR 428

Query: 620 IC 625
            C
Sbjct: 429 RC 430


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1173

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = +2

Query: 230  LARYSETSDCARRVVGVLPQEERPP 304
            L RY+ET + ARR      Q ER P
Sbjct: 1055 LRRYNETRNAARRAATQQRQAERLP 1079


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -1

Query: 575 SRLRNPFWTGCWVLFAS 525
           SR+  PF  G W+L AS
Sbjct: 242 SRVETPFVIGVWILSAS 258


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 719,159
Number of Sequences: 2352
Number of extensions: 15217
Number of successful extensions: 32
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63977715
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)