Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021767
         (647 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U64857-14|AAL16313.1|  402|Caenorhabditis elegans Hypothetical p...    47   1e-05
U64857-13|AAC25859.2|  436|Caenorhabditis elegans Hypothetical p...    47   1e-05
U64857-12|AAN84849.1|  413|Caenorhabditis elegans Hypothetical p...    47   1e-05
Z70307-5|CAA94331.1|  209|Caenorhabditis elegans Hypothetical pr...    28   5.0  
Z93388-13|CAB07666.1|  383|Caenorhabditis elegans Hypothetical p...    28   6.6  
U88176-2|AAO91740.3|  550|Caenorhabditis elegans Hypothetical pr...    27   8.7  
AL032627-8|CAB63354.2|  373|Caenorhabditis elegans Hypothetical ...    27   8.7  

>U64857-14|AAL16313.1|  402|Caenorhabditis elegans Hypothetical
           protein C37C3.2b protein.
          Length = 402

 Score = 46.8 bits (106), Expect = 1e-05
 Identities = 19/28 (67%), Positives = 24/28 (85%)
 Frame = +2

Query: 563 SLNVNRNVSDAFYRYKMPRICANVQGKG 646
           +LNVNR V+D FYRYKMP++ A V+GKG
Sbjct: 2   ALNVNRAVADPFYRYKMPKLSAKVEGKG 29


>U64857-13|AAC25859.2|  436|Caenorhabditis elegans Hypothetical
           protein C37C3.2a protein.
          Length = 436

 Score = 46.8 bits (106), Expect = 1e-05
 Identities = 19/28 (67%), Positives = 24/28 (85%)
 Frame = +2

Query: 563 SLNVNRNVSDAFYRYKMPRICANVQGKG 646
           +LNVNR V+D FYRYKMP++ A V+GKG
Sbjct: 2   ALNVNRAVADPFYRYKMPKLSAKVEGKG 29


>U64857-12|AAN84849.1|  413|Caenorhabditis elegans Hypothetical
           protein C37C3.2c protein.
          Length = 413

 Score = 46.8 bits (106), Expect = 1e-05
 Identities = 19/28 (67%), Positives = 24/28 (85%)
 Frame = +2

Query: 563 SLNVNRNVSDAFYRYKMPRICANVQGKG 646
           +LNVNR V+D FYRYKMP++ A V+GKG
Sbjct: 2   ALNVNRAVADPFYRYKMPKLSAKVEGKG 29


>Z70307-5|CAA94331.1|  209|Caenorhabditis elegans Hypothetical
           protein C39E9.5 protein.
          Length = 209

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = -3

Query: 333 CVKRHAPSTAGGRSSCGNTPTTLRAQSDVSEYLAK 229
           CV  HA  + GG+ S  N    +R+     EY+AK
Sbjct: 11  CVGAHAQFSEGGKQSMVNAHNAVRSSIAKGEYVAK 45


>Z93388-13|CAB07666.1|  383|Caenorhabditis elegans Hypothetical
           protein T10C6.10a protein.
          Length = 383

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 15/55 (27%), Positives = 27/55 (49%)
 Frame = +1

Query: 220 LYDFSKIFRNIRLCAESSRCVATGGTAASRRGCMTLNTTRYTVRRTSKFCSNRHR 384
           L+D ++IF   R+C   +R V  G    +    + L+ T++ V   ++F S   R
Sbjct: 217 LFDLTQIFDLNRVCIMDARWVTFGYVMGANFTRLMLSNTKWDVETVNQFISRWFR 271


>U88176-2|AAO91740.3|  550|Caenorhabditis elegans Hypothetical
           protein F18F11.4 protein.
          Length = 550

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -2

Query: 145 RVESRTPHRPATHHTVNLND 86
           R+ S TPH+P  H T  LND
Sbjct: 149 RLSSVTPHQPYIHLTTELND 168


>AL032627-8|CAB63354.2|  373|Caenorhabditis elegans Hypothetical
           protein Y41C4A.5 protein.
          Length = 373

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = -3

Query: 333 CVKRHAPSTAGGRSSCGNTPTTLRAQSDVSE 241
           CV+   P+T   +++   TPTT +AQ+ ++E
Sbjct: 149 CVRPGVPTTPDPKATTTPTPTTTKAQNIIAE 179


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,466,035
Number of Sequences: 27780
Number of extensions: 321181
Number of successful extensions: 776
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 775
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)