Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021766
(731 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0008 + 13651997-13652072,13652440-13652541,13653138-136531... 60 1e-09
05_04_0139 + 18355597-18355696,18356665-18356778,18357118-183572... 58 9e-09
08_02_0726 + 20452492-20453238,20453676-20453765,20453904-20454107 56 2e-08
06_01_0830 + 6261629-6261704,6261829-6261974,6262086-6262310,626... 50 1e-06
02_05_0782 - 31716860-31717150,31717400-31717612,31718497-317186... 44 2e-04
01_05_0009 - 17101633-17101836,17101948-17102040,17102122-171023... 42 4e-04
09_03_0079 + 12142390-12142459,12142792-12143006,12143050-121432... 42 5e-04
01_05_0553 + 23185473-23186188,23187096-23187101,23187230-231873... 34 0.10
11_06_0061 - 19702893-19703869,19703960-19704098,19704166-197042... 32 0.41
01_01_0981 + 7766025-7766753 31 0.94
07_03_1563 - 27746977-27747180,27747280-27747369,27747529-277477... 31 1.2
04_04_1154 - 31297628-31298020,31298150-31298300,31298389-312986... 31 1.2
05_07_0014 - 27046329-27046371,27059170-27060017,27060739-27061563 30 2.2
09_02_0566 + 10732359-10732497,10733114-10733267,10733448-107335... 29 2.9
05_03_0051 + 7813903-7814077,7814192-7814302,7815028-7815317 29 2.9
01_01_0409 - 3084821-3084988,3085069-3085155,3085270-3085476,308... 29 5.0
08_02_1243 - 25527523-25527960,25527993-25528604 28 8.8
03_06_0122 - 31815023-31816357 28 8.8
>09_04_0008 +
13651997-13652072,13652440-13652541,13653138-13653142,
13653970-13654188,13654686-13654901,13654989-13655078,
13656307-13656507
Length = 302
Score = 60.5 bits (140), Expect = 1e-09
Identities = 50/161 (31%), Positives = 79/161 (49%), Gaps = 13/161 (8%)
Frame = +1
Query: 265 VGVPNFNAVE--------DAAAL-RAAMKGFGTDEQAIIDILTTRSNMQRQAIFTGLHTR 417
VG+P + E DA L +A K GTDE+ I I T RS ++ + H
Sbjct: 140 VGIPRYEGPEVDPTIVTHDAKDLYKAGEKRLGTDEKTFIRIFTERSWAHMASVASAYH-H 198
Query: 418 VWKRSH*R---PEV*IGWSLRRCN-RGSDDSP*GDLCQELHRCMEGMGTDEDTLVEILCT 585
++ RS + E + L ++P + L + M+GMGTD+ TL+ ++ T
Sbjct: 199 MYDRSLEKVVKSETSGNFELALLTILRCAENPAKYFAKVLRKSMKGMGTDDSTLIRVVVT 258
Query: 586 RTKPEIAAIVDTYERLYDRPLAEHMCSETSGDFRRLLTLIV 708
RT+ ++ I Y + Y + LAE + SETSG++R L +V
Sbjct: 259 RTEIDMQYIKAEYYKKYKKSLAEAIHSETSGNYRTFLLSLV 299
Score = 37.5 bits (83), Expect = 0.011
Identities = 22/67 (32%), Positives = 32/67 (47%)
Frame = +1
Query: 523 LHRCMEGMGTDEDTLVEILCTRTKPEIAAIVDTYERLYDRPLAEHMCSETSGDFRRLLTL 702
L + G D EI+C+RT ++ + TY + L + TSGD ++LL L
Sbjct: 79 LREALSGDTIDLRAATEIICSRTPSQLQIMKQTYHAKFGTYLEHDIGQRTSGDHQKLL-L 137
Query: 703 IVVGGPR 723
VG PR
Sbjct: 138 AYVGIPR 144
>05_04_0139 +
18355597-18355696,18356665-18356778,18357118-18357263,
18357365-18357910,18358397-18358600
Length = 369
Score = 57.6 bits (133), Expect = 9e-09
Identities = 28/62 (45%), Positives = 38/62 (61%)
Frame = +1
Query: 517 QELHRCMEGMGTDEDTLVEILCTRTKPEIAAIVDTYERLYDRPLAEHMCSETSGDFRRLL 696
+ + + ++G GTDE+ L+EIL RT + A I YE LYD L + + SE SGDFR L
Sbjct: 64 ESIRKAVQGWGTDENALIEILGHRTAAQRAEIAVAYEGLYDETLLDRLHSELSGDFRSAL 123
Query: 697 TL 702
L
Sbjct: 124 ML 125
Score = 41.9 bits (94), Expect = 5e-04
Identities = 44/158 (27%), Positives = 71/158 (44%), Gaps = 10/158 (6%)
Frame = +1
Query: 265 VGVPNF--NAVEDAAALRAAMKGFGTDEQAIIDILTTRSNMQRQAI---FTGLHTR-VWK 426
+ VPN + EDA ++R A++G+GTDE A+I+IL R+ QR I + GL+ +
Sbjct: 50 ISVPNPAPSPTEDAESIRKAVQGWGTDENALIEILGHRTAAQRAEIAVAYEGLYDETLLD 109
Query: 427 RSH*R--PEV*IGWSLRRCNRGSDDSP*GDLCQELHRCMEGMGTDEDTLVEILCTRTKPE 600
R H + L + + D+ + + L + +G LVE+ C +
Sbjct: 110 RLHSELSGDFRSALMLWTMDPAARDAKLAN--EALKKKKKGELRHIWVLVEVACASSPDH 167
Query: 601 IAAIVDTYERLYDRPLAEHM--CSETSGDFRRLLTLIV 708
+ A+ Y Y L E + CS RR L +V
Sbjct: 168 LVAVRKAYRAAYASSLEEDVASCSLFGDPLRRFLVRLV 205
Score = 34.3 bits (75), Expect = 0.10
Identities = 18/77 (23%), Positives = 40/77 (51%)
Frame = +1
Query: 496 SP*GDLCQELHRCMEGMGTDEDTLVEILCTRTKPEIAAIVDTYERLYDRPLAEHMCSETS 675
SP + + + G+GTDE+ L + +R + ++ + + Y+ Y+ + + +TS
Sbjct: 295 SPEKHFAEVIRTSILGLGTDEEMLTRGIVSRAEVDMEKVKEEYKVRYNTTVTADVRGDTS 354
Query: 676 GDFRRLLTLIVVGGPRR 726
G + + TL+ + GP +
Sbjct: 355 GYY--MNTLLTLVGPEK 369
>08_02_0726 + 20452492-20453238,20453676-20453765,20453904-20454107
Length = 346
Score = 56.4 bits (130), Expect = 2e-08
Identities = 29/77 (37%), Positives = 47/77 (61%)
Frame = +1
Query: 493 DSP*GDLCQELHRCMEGMGTDEDTLVEILCTRTKPEIAAIVDTYERLYDRPLAEHMCSET 672
+SP + LH M+G+GT++ TL+ ++ TR + ++ I Y R Y R LA+ + SET
Sbjct: 271 ESPAKYFAKVLHEAMKGLGTNDTTLIRVVTTRAEVDMQYIKAEYHRSYKRSLADAVHSET 330
Query: 673 SGDFRRLLTLIVVGGPR 723
SG++R L L ++G R
Sbjct: 331 SGNYRTFL-LSLIGRDR 346
Score = 37.9 bits (84), Expect = 0.008
Identities = 20/64 (31%), Positives = 31/64 (48%)
Frame = +1
Query: 520 ELHRCMEGMGTDEDTLVEILCTRTKPEIAAIVDTYERLYDRPLAEHMCSETSGDFRRLLT 699
+LHR +G G D + IL R + A I Y +Y + L + +E SG +R +
Sbjct: 19 DLHRAFKGFGCDATAVTAILAHRDASQRALIRRHYAAVYHQDLLHRLAAELSGHHKRAVL 78
Query: 700 LIVV 711
L V+
Sbjct: 79 LWVL 82
Score = 37.5 bits (83), Expect = 0.011
Identities = 42/149 (28%), Positives = 59/149 (39%), Gaps = 6/149 (4%)
Frame = +1
Query: 295 DAAALRAAMKGFGTDEQAIIDILTTRSNMQRQAIFTGLHTRVWKRS--H*RPEV*IGWSL 468
DA L A KGFG D A+ IL R QR A+ + V+ + H G
Sbjct: 16 DAIDLHRAFKGFGCDATAVTAILAHRDASQR-ALIRRHYAAVYHQDLLHRLAAELSGHHK 74
Query: 469 RRCNRGSDDSP*GDLCQELHRCMEGMGTDEDTLVEILCTRTKPEIAAIVDTYERLY---- 636
R D D LH+ + G TD E++C+RT ++ + Y +
Sbjct: 75 RAVLLWVLDPASRDAAV-LHQALNGDVTDMRAATEVVCSRTPSQLLVVRQAYLARFGGGG 133
Query: 637 DRPLAEHMCSETSGDFRRLLTLIVVGGPR 723
L + SGD +RLL L + PR
Sbjct: 134 GGGLEHDVAVRASGDHQRLL-LAYLRSPR 161
Score = 36.7 bits (81), Expect = 0.019
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +1
Query: 517 QELHRCMEG-MGTDEDTLVEILCTRTKPEIAAIVDTYERLYDRPL 648
+EL+R E +GTDE T + + R+ +AA+ Y +YDR L
Sbjct: 178 RELYRAGERRLGTDERTFIRVFSERSAAHMAAVAAAYHHMYDRSL 222
Score = 36.3 bits (80), Expect = 0.025
Identities = 19/45 (42%), Positives = 27/45 (60%)
Frame = +1
Query: 298 AAALRAAMKGFGTDEQAIIDILTTRSNMQRQAIFTGLHTRVWKRS 432
A L AMKG GT++ +I ++TTR+ + Q I H R +KRS
Sbjct: 278 AKVLHEAMKGLGTNDTTLIRVVTTRAEVDMQYIKAEYH-RSYKRS 321
>06_01_0830 +
6261629-6261704,6261829-6261974,6262086-6262310,
6262910-6263122,6264007-6264300
Length = 317
Score = 50.4 bits (115), Expect = 1e-06
Identities = 41/133 (30%), Positives = 64/133 (48%), Gaps = 4/133 (3%)
Frame = +1
Query: 322 KGFGTDEQAIIDILTTRSNMQRQAIFTGLHTR----VWKRSH*RPEV*IGWSLRRCNRGS 489
K +G DE II ILTTRS Q A F + + K P+ +LR R
Sbjct: 184 KAYGDDE--IIRILTTRSKAQLIATFNRYNDEYGHPINKDLKADPKDEFLSTLRAIIR-C 240
Query: 490 DDSP*GDLCQELHRCMEGMGTDEDTLVEILCTRTKPEIAAIVDTYERLYDRPLAEHMCSE 669
P + + + GMGTDE++L I+ TR + ++ I + Y++ PL + +
Sbjct: 241 FCCPDRYFEKVIRLAIAGMGTDENSLTRIITTRAEVDLKLITEAYQKRNSVPLERAVAGD 300
Query: 670 TSGDFRRLLTLIV 708
TSGD+ R+L ++
Sbjct: 301 TSGDYERMLLALL 313
Score = 48.4 bits (110), Expect = 6e-06
Identities = 45/144 (31%), Positives = 66/144 (45%), Gaps = 5/144 (3%)
Frame = +1
Query: 292 EDAAALRAAMKGFGTDEQAIIDILTTRSNMQRQAI---FTGLHTRVWKRSH*RPEV*IGW 462
+D LR A +G+GT+E II IL R QR+AI + + RS E+ G
Sbjct: 15 DDCDQLRKAFQGWGTNEALIISILAHRDAAQRRAIRRAYADTYGEELLRSI-TDEI-SGD 72
Query: 463 SLRRCNRGSDDSP*GD--LCQELHRCMEGMGTDEDTLVEILCTRTKPEIAAIVDTYERLY 636
R + D D L E+ R G+ LVEI C R ++ A+ Y +
Sbjct: 73 FERAVILWTLDPAERDAVLANEVARKWYP-GSGSRVLVEIACARGPAQLFAVRQAYHERF 131
Query: 637 DRPLAEHMCSETSGDFRRLLTLIV 708
R L E + + +GDFR+LL ++
Sbjct: 132 KRSLEEDVAAHATGDFRKLLVPLI 155
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +1
Query: 307 LRAAMKGFGTDEQAIIDILTTRSNMQRQAI 396
+R A+ G GTDE ++ I+TTR+ + + I
Sbjct: 252 IRLAIAGMGTDENSLTRIITTRAEVDLKLI 281
>02_05_0782 -
31716860-31717150,31717400-31717612,31718497-31718642,
31718742-31718817
Length = 241
Score = 43.6 bits (98), Expect = 2e-04
Identities = 37/133 (27%), Positives = 62/133 (46%), Gaps = 4/133 (3%)
Frame = +1
Query: 322 KGFGTDEQAIIDILTTRSNMQRQAIFTGLHTR----VWKRSH*RPEV*IGWSLRRCNRGS 489
K + DE II ILTTRS Q A F + + + K P+ +LR R
Sbjct: 109 KAYSDDE--IIRILTTRSKAQLLATFNSYNDQFGHPITKDLKADPKDEFLGTLRAIIR-C 165
Query: 490 DDSP*GDLCQELHRCMEGMGTDEDTLVEILCTRTKPEIAAIVDTYERLYDRPLAEHMCSE 669
P + + + GMGTDE++L I+ TR + ++ I + Y++ PL + +
Sbjct: 166 FTCPDRYFEKVIRLALGGMGTDENSLTRIITTRAEVDLKLIKEAYQKRNSVPLERAVAKD 225
Query: 670 TSGDFRRLLTLIV 708
T+ D+ +L ++
Sbjct: 226 TTRDYEDILLALL 238
Score = 42.7 bits (96), Expect = 3e-04
Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 10/149 (6%)
Frame = +1
Query: 292 EDAAALRAAMKGFGTDEQAIIDILTTRSNMQRQAI---FTGLHTRVWKRS-----H*RPE 447
ED LR A KG+GT+E+ II IL R QR+AI + + R+ H + E
Sbjct: 15 EDCEQLRKAFKGWGTNEKLIISILAHRDAAQRRAIRRAYAEAYGEELLRALNDEIHGKFE 74
Query: 448 --V*IGWSLRRCNRGSDDSP*GDLCQELHRCMEGMGTDEDTLVEILCTRTKPEIAAIVDT 621
V + R + S + LH + +D ++ IL TR+K ++ A ++
Sbjct: 75 LLVPLVTVYRYDGPEVNTSLAHSEAKILHEKIHDKAYSDDEIIRILTTRSKAQLLATFNS 134
Query: 622 YERLYDRPLAEHMCSETSGDFRRLLTLIV 708
Y + P+ + + ++ +F L I+
Sbjct: 135 YNDQFGHPITKDLKADPKDEFLGTLRAII 163
Score = 41.1 bits (92), Expect = 9e-04
Identities = 21/71 (29%), Positives = 33/71 (46%)
Frame = +1
Query: 499 P*GDLCQELHRCMEGMGTDEDTLVEILCTRTKPEIAAIVDTYERLYDRPLAEHMCSETSG 678
P + C++L + +G GT+E ++ IL R + AI Y Y L + E G
Sbjct: 12 PVAEDCEQLRKAFKGWGTNEKLIISILAHRDAAQRRAIRRAYAEAYGEELLRALNDEIHG 71
Query: 679 DFRRLLTLIVV 711
F L+ L+ V
Sbjct: 72 KFELLVPLVTV 82
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +1
Query: 307 LRAAMKGFGTDEQAIIDILTTRSNMQRQAI 396
+R A+ G GTDE ++ I+TTR+ + + I
Sbjct: 177 IRLALGGMGTDENSLTRIITTRAEVDLKLI 206
>01_05_0009 -
17101633-17101836,17101948-17102040,17102122-17102334,
17102514-17102651,17102764-17102909,17106264-17106339
Length = 289
Score = 42.3 bits (95), Expect = 4e-04
Identities = 36/149 (24%), Positives = 63/149 (42%), Gaps = 5/149 (3%)
Frame = +1
Query: 286 AVEDAAALRAAMKGFGTDEQAIIDILTTRSNMQRQAIFTGLH----TRVWKR-SH*RPEV 450
A +A L + TD +I I+ TRS Q A F+ T + K H
Sbjct: 141 AKSEAKILHETVTNGDTDHGELIRIVGTRSRAQLNATFSWFRDERGTSITKALQHGADPT 200
Query: 451 *IGWSLRRCNRGSDDSP*GDLCQELHRCMEGMGTDEDTLVEILCTRTKPEIAAIVDTYER 630
+LR R D+ + L M GT+ED+L ++ + ++ I D +++
Sbjct: 201 GYSHALRTALRCISDAN-KYFVKVLRNAMHKSGTNEDSLTRVIVLHAEKDLKGIKDAFQK 259
Query: 631 LYDRPLAEHMCSETSGDFRRLLTLIVVGG 717
L + + ++TSGD++ L ++ G
Sbjct: 260 RASVALEKAIGNDTSGDYKSFLMALLGSG 288
Score = 40.3 bits (90), Expect = 0.002
Identities = 31/108 (28%), Positives = 48/108 (44%)
Frame = +1
Query: 292 EDAAALRAAMKGFGTDEQAIIDILTTRSNMQRQAIFTGLHTRVWKRSH*RPEV*IGWSLR 471
EDA AL A +G+GTDEQA+I +L R QR+ I + R + + L
Sbjct: 15 EDADALLKAFQGWGTDEQAVIGVLAHRDATQRKQIRLTYEENYNENLIQRLQSELSGDLE 74
Query: 472 RCNRGSDDSP*GDLCQELHRCMEGMGTDEDTLVEILCTRTKPEIAAIV 615
R P ++ + + D +VEI CT + E+ A++
Sbjct: 75 RAMYHWVLDPVERQAVMVNTATKCIHEDYAVIVEIACTNSSSELLALL 122
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/58 (34%), Positives = 30/58 (51%)
Frame = +1
Query: 523 LHRCMEGMGTDEDTLVEILCTRTKPEIAAIVDTYERLYDRPLAEHMCSETSGDFRRLL 696
L + +G GTDE ++ +L R + I TYE Y+ L + + SE SGD R +
Sbjct: 20 LLKAFQGWGTDEQAVIGVLAHRDATQRKQIRLTYEENYNENLIQRLQSELSGDLERAM 77
>09_03_0079 +
12142390-12142459,12142792-12143006,12143050-12143268,
12143345-12143932
Length = 363
Score = 41.9 bits (94), Expect = 5e-04
Identities = 20/52 (38%), Positives = 26/52 (50%)
Frame = +1
Query: 541 GMGTDEDTLVEILCTRTKPEIAAIVDTYERLYDRPLAEHMCSETSGDFRRLL 696
G D D LVE++CTR E+A I Y+ Y L + S TSG +L
Sbjct: 119 GRRIDGDVLVEVVCTRPSGEVALIRQAYQARYSASLERDVSSRTSGSLNEVL 170
>01_05_0553 + 23185473-23186188,23187096-23187101,23187230-23187374,
23187887-23188159,23188275-23188338,23188479-23188744,
23188951-23189045,23189544-23189718,23190669-23191063,
23191830-23191953,23192864-23192959,23193049-23193120,
23194687-23194824,23195369-23195549,23195602-23195963,
23196944-23197386,23197461-23197763,23197857-23198081,
23198260-23198350,23198702-23198779,23198939-23199229,
23199316-23199513,23199681-23200163,23200488-23200562,
23201163-23201324,23201400-23201729,23201816-23201916,
23202477-23202581,23202931-23203162,23203913-23204257,
23204346-23204447,23206010-23206153,23206463-23206551,
23206979-23207061,23207172-23207287,23207824-23207909,
23208461-23208560,23209270-23209335
Length = 2451
Score = 34.3 bits (75), Expect = 0.10
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = -1
Query: 575 ISTRVSSSVPIPSMQRCSSWHRSPQ 501
+ RV S +P+PS QRCSS H PQ
Sbjct: 1538 LGLRVLSLLPLPSQQRCSSLHEHPQ 1562
>11_06_0061 -
19702893-19703869,19703960-19704098,19704166-19704287,
19704362-19704416,19704508-19704624,19704718-19705413,
19706358-19706393,19707190-19708236
Length = 1062
Score = 32.3 bits (70), Expect = 0.41
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Frame = -1
Query: 716 PPTTMSVRRRRKSPDVSEHMCSASGRSYNRSYVSTIAAISGLVLVQRISTRVSSS--VPI 543
P + V + +SE +C +SG +++ S SG+ +Q +S ++ S+ VP+
Sbjct: 418 PEDSEDVSHSEMNTPLSE-LCKSSGSNHSPKSCSDP---SGMKKIQVLSKKIVSNCLVPV 473
Query: 542 PSMQRCSSWHRSPQGESSE 486
+ S+ HR PQ ES E
Sbjct: 474 KGILDASTGHRIPQNESRE 492
>01_01_0981 + 7766025-7766753
Length = 242
Score = 31.1 bits (67), Expect = 0.94
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +3
Query: 573 DPLHQNQARDSRYCGHIRTIVRPPAGRAHVLRDVG 677
DP+H+ + Y + + RPP G AH R +G
Sbjct: 167 DPVHEGEDERGEYYELLPILTRPPGGCAHCRRHIG 201
>07_03_1563 -
27746977-27747180,27747280-27747369,27747529-27747753,
27748002-27748115,27748218-27748423,27748757-27748832
Length = 304
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = +1
Query: 541 GMGTDEDTLVEILCTRTKPEIAAIVDTYERLYDRPL 648
G D+ L ILC RT + AAI Y LY PL
Sbjct: 40 GWRADKGALTRILCRRTAAQRAAIRRAYAFLYREPL 75
>04_04_1154 -
31297628-31298020,31298150-31298300,31298389-31298620,
31298700-31298910,31299137-31299255,31299341-31299415,
31299991-31300189,31300258-31300664,31300775-31300839,
31300967-31301011,31301449-31301520,31301597-31301671,
31301912-31301983,31302178-31302249,31302525-31302596,
31302880-31302951,31303056-31303127,31304064-31304135,
31304375-31304561,31304686-31304815
Length = 930
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = -1
Query: 179 RIQISNLVTLYDCCRKNNLFLLM 111
R+Q NLVTLY CC ++N LL+
Sbjct: 636 RVQHCNLVTLYGCCLESNTPLLV 658
>05_07_0014 - 27046329-27046371,27059170-27060017,27060739-27061563
Length = 571
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/56 (33%), Positives = 22/56 (39%)
Frame = +3
Query: 564 PR*DPLHQNQARDSRYCGHIRTIVRPPAGRAHVLRDVGRLPPPPDTHCRRGPAQTK 731
P P H A R IRT + G + V R PPPP GP QT+
Sbjct: 222 PSYTPGHTPVASSRRGPRFIRTARKRVVGSSTVFRFCHPAPPPPAARAAAGPRQTQ 277
>09_02_0566 +
10732359-10732497,10733114-10733267,10733448-10733519,
10733701-10733769,10734430-10734501,10734590-10734661,
10734769-10734840,10734928-10734999,10735121-10735192,
10735293-10735364,10735435-10735506,10735826-10735897,
10736039-10736104,10736638-10736676,10736787-10736845,
10737166-10737545,10737629-10737824,10738012-10738179,
10738618-10738736,10738873-10739083,10739163-10739403,
10739830-10739980,10740469-10740828
Length = 999
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -1
Query: 194 IGGFQRIQISNLVTLYDCCRKNNLFLLM 111
IG +Q NLV LY CC + N LL+
Sbjct: 708 IGMISALQHPNLVKLYGCCTEGNQLLLV 735
>05_03_0051 + 7813903-7814077,7814192-7814302,7815028-7815317
Length = 191
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = -2
Query: 514 TGLLRGSHQSHDYIFEVTTQFRLQVFNEISS 422
+GLL+ +++ HD +FE +T LQV N I+S
Sbjct: 44 SGLLQSNYK-HDLLFEASTPSHLQVLNWITS 73
>01_01_0409 -
3084821-3084988,3085069-3085155,3085270-3085476,
3085904-3085985,3086085-3086275,3086410-3086616,
3086709-3086871,3087905-3087960,3088035-3088148,
3088599-3089807
Length = 827
Score = 28.7 bits (61), Expect = 5.0
Identities = 13/33 (39%), Positives = 15/33 (45%), Gaps = 3/33 (9%)
Frame = -2
Query: 577 GSQRGCL---HPCPYPPCNGAAPGTGLLRGSHQ 488
G + CL HP P PPC P GSH+
Sbjct: 208 GCEHNCLLLCHPGPCPPCPAIVPNAMCFCGSHR 240
>08_02_1243 - 25527523-25527960,25527993-25528604
Length = 349
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -2
Query: 586 WCRGSQRGCLHPCPYPPCNGAAP 518
WC S RG C PP AAP
Sbjct: 87 WCTPSSRGAPTMCSSPPTQSAAP 109
>03_06_0122 - 31815023-31816357
Length = 444
Score = 27.9 bits (59), Expect = 8.8
Identities = 16/33 (48%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +1
Query: 220 SSHLNRNGLSESPTV-VGVPNFNAVEDAAALRA 315
SS + G PTV VGVP+ EDAAA A
Sbjct: 380 SSSVQGEGRCSKPTVEVGVPHVGCAEDAAAFVA 412
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,065,121
Number of Sequences: 37544
Number of extensions: 488883
Number of successful extensions: 1581
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1482
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1579
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1921741964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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