Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021766
(731 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_26806| Best HMM Match : Annexin (HMM E-Value=0) 65 6e-11
SB_37033| Best HMM Match : Annexin (HMM E-Value=0) 60 2e-09
SB_47771| Best HMM Match : Annexin (HMM E-Value=0) 53 3e-07
SB_6006| Best HMM Match : Annexin (HMM E-Value=2.4e-25) 42 4e-04
SB_7681| Best HMM Match : Annexin (HMM E-Value=0) 42 4e-04
SB_35578| Best HMM Match : Annexin (HMM E-Value=1e-19) 42 5e-04
SB_22953| Best HMM Match : EGF_2 (HMM E-Value=1.3e-14) 33 0.18
SB_57080| Best HMM Match : EGF_CA (HMM E-Value=1.4013e-43) 31 1.3
SB_45154| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45) 30 1.7
SB_48470| Best HMM Match : HNOB (HMM E-Value=0) 30 1.7
SB_29145| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_9772| Best HMM Match : EGF_CA (HMM E-Value=3.9e-25) 30 2.2
SB_33077| Best HMM Match : R3H (HMM E-Value=0.38) 29 2.9
SB_39667| Best HMM Match : rve (HMM E-Value=9e-32) 29 2.9
SB_19340| Best HMM Match : EGF_CA (HMM E-Value=3.8e-27) 29 2.9
SB_52151| Best HMM Match : TPR_1 (HMM E-Value=0) 29 3.9
SB_19234| Best HMM Match : Extensin_2 (HMM E-Value=0.23) 29 3.9
SB_1528| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_56223| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0
>SB_26806| Best HMM Match : Annexin (HMM E-Value=0)
Length = 829
Score = 64.9 bits (151), Expect = 6e-11
Identities = 31/66 (46%), Positives = 41/66 (62%)
Frame = +1
Query: 517 QELHRCMEGMGTDEDTLVEILCTRTKPEIAAIVDTYERLYDRPLAEHMCSETSGDFRRLL 696
+ L+ M+G+GT E L+EILCTR+ EI I Y + Y R L + M SETSGDF LL
Sbjct: 519 RSLYYAMKGLGTKEAQLIEILCTRSNAEIQEIKQEYNKKYGRSLTDDMKSETSGDFENLL 578
Query: 697 TLIVVG 714
++ G
Sbjct: 579 ETLLKG 584
Score = 42.3 bits (95), Expect = 4e-04
Identities = 48/155 (30%), Positives = 69/155 (44%), Gaps = 15/155 (9%)
Frame = +1
Query: 295 DAAALRAAMKGFGTDEQAIIDILTTRSNMQRQAIFTGLHTRVWK--RSH*RPEV*IGWS- 465
D +L AMKG GT E +I+IL TRSN + Q I + + + + E +
Sbjct: 517 DVRSLYYAMKGLGTKEAQLIEILCTRSNAEIQEIKQEYNKKYGRSLTDDMKSETSGDFEN 576
Query: 466 -LRRCNRGSDDSP*GDLCQEL---------HRCMEGMGTDEDTLVEILCTRTKPEIAAIV 615
L +GS D D+ +EL + GTDED + IL R+ + A++
Sbjct: 577 LLETLLKGSRDES-TDVNKELVTKDAAALVSAGVARWGTDEDQFITILSQRSSAHVQAVL 635
Query: 616 DTYERLYDR-PLAEHMCSETSGDFR-RLLTLIVVG 714
Y+ L LA+ + E GD R LL LI G
Sbjct: 636 AEYKTLSGGVSLADTVRDEMKGDLRDALLVLISYG 670
Score = 37.5 bits (83), Expect = 0.011
Identities = 21/39 (53%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +1
Query: 286 AVEDAAAL-RAAMKGFGTDEQAIIDILTTRSNMQRQAIF 399
A +DA AL A +K +GTDE I+I TTRS Q QA+F
Sbjct: 171 AHKDAEALIEAGIKKWGTDEDCFIEIFTTRSYPQLQAMF 209
Score = 35.5 bits (78), Expect = 0.045
Identities = 14/32 (43%), Positives = 23/32 (71%)
Frame = +2
Query: 401 QAFTREYGRDLIEDLKSELGGHFEDVIVALMT 496
+ + ++YG L +D+K E G FED++VALM+
Sbjct: 93 EEYQKKYGCSLEDDVKEETSGDFEDLLVALMS 124
Score = 35.5 bits (78), Expect = 0.045
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = +2
Query: 401 QAFTREYGRDLIEDLKSELGGHFEDVIVALM 493
Q + ++YGR L +D+KSE G FE+++ L+
Sbjct: 552 QEYNKKYGRSLTDDMKSETSGDFENLLETLL 582
Score = 31.9 bits (69), Expect = 0.55
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +1
Query: 547 GTDEDTLVEILCTRTKPEIAAIVDTYERL 633
GTDED +EI TR+ P++ A+ Y ++
Sbjct: 187 GTDEDCFIEIFTTRSYPQLQAMFPEYSKV 215
Score = 31.1 bits (67), Expect = 0.96
Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +1
Query: 292 EDAAAL-RAAMKGFGTDEQAIIDILTTRSNMQRQAIFTGLHT 414
+DAAAL A + +GT+E I ILT RS+ QA+ T
Sbjct: 772 QDAAALVSAGVARWGTEEDQFITILTQRSSAHVQAVLAEYRT 813
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +1
Query: 292 EDAAAL-RAAMKGFGTDEQAIIDILTTRSNMQRQAIFTGLHT 414
+DAAAL A + +GTDE I IL+ RS+ QA+ T
Sbjct: 599 KDAAALVSAGVARWGTDEDQFITILSQRSSAHVQAVLAEYKT 640
Score = 29.5 bits (63), Expect = 2.9
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Frame = +1
Query: 505 GDLCQELHRCMEGM---GTDEDTLVEILCTRTKPEIAAIVDTYERLYDRPLAEHMCSETS 675
G L ++LH + M G + D + I +I + Y++ Y L + + ETS
Sbjct: 56 GKLEEDLHEAVAAMLLPGNEADARTLYFAMKN---IDSIKEEYQKKYGCSLEDDVKEETS 112
Query: 676 GDFRRLLTLIV 708
GDF LL ++
Sbjct: 113 GDFEDLLVALM 123
>SB_37033| Best HMM Match : Annexin (HMM E-Value=0)
Length = 287
Score = 59.7 bits (138), Expect = 2e-09
Identities = 38/122 (31%), Positives = 60/122 (49%)
Frame = +1
Query: 331 GTDEQAIIDILTTRSNMQRQAIFTGLHTRVWKRSH*RPEV*IGWSLRRCNRGSDDSP*GD 510
G D +A++ +L +R+N QRQ I T + + +G P
Sbjct: 101 GCDNKALMYLLCSRTNSQRQRISLEYKTMFGRDLIKDLKSEVGGYFEDTVIALMTPPAEY 160
Query: 511 LCQELHRCMEGMGTDEDTLVEILCTRTKPEIAAIVDTYERLYDRPLAEHMCSETSGDFRR 690
L + ++G+GTDE L+E+L TRT EI AI + Y L+ R L + + +TSG F++
Sbjct: 161 DATLLRKAIKGLGTDEAVLIEVLTTRTNDEIIAIRNAYNTLFSRDLEKDIAGDTSGKFKK 220
Query: 691 LL 696
L
Sbjct: 221 FL 222
Score = 56.4 bits (130), Expect = 2e-08
Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Frame = +2
Query: 347 RSLIY*LPGPTCSGKP-YSQAFTREYGRDLIEDLKSELGGHFEDVIVALMTPPEE 508
++L+Y L T S + S + +GRDLI+DLKSE+GG+FED ++ALMTPP E
Sbjct: 105 KALMYLLCSRTNSQRQRISLEYKTMFGRDLIKDLKSEVGGYFEDTVIALMTPPAE 159
Score = 49.6 bits (113), Expect = 3e-06
Identities = 39/125 (31%), Positives = 60/125 (48%), Gaps = 1/125 (0%)
Frame = +1
Query: 259 TVVGVPNFNAVEDAAALRAAMKGFGTDEQAIIDILTTRSNMQRQAIFTGLHTRVWKRSH* 438
TV+ + A DA LR A+KG GTDE +I++LTTR+N + AI +T ++ R
Sbjct: 149 TVIALMTPPAEYDATLLRKAIKGLGTDEAVLIEVLTTRTNDEIIAIRNAYNT-LFSRD-- 205
Query: 439 RPEV*IGWSLRRCNRGSDDSP*GDLCQELHRCMEG-MGTDEDTLVEILCTRTKPEIAAIV 615
+ + G LC L++ EG GTDE IL +R+ ++ A
Sbjct: 206 -----LEKDIAGDTSGKFKKFLISLCNALYKAGEGRWGTDESKFNSILASRSFDQLRATF 260
Query: 616 DTYER 630
+ Y +
Sbjct: 261 NEYSK 265
>SB_47771| Best HMM Match : Annexin (HMM E-Value=0)
Length = 529
Score = 52.8 bits (121), Expect = 3e-07
Identities = 22/42 (52%), Positives = 32/42 (76%)
Frame = +2
Query: 398 SQAFTREYGRDLIEDLKSELGGHFEDVIVALMTPPEETCARS 523
+Q+F ++Y +DL+ +LKSEL G FED IVAL+ PPE+ A +
Sbjct: 341 AQSFKQQYDKDLVNELKSELSGKFEDAIVALLLPPEQLDANA 382
Score = 49.2 bits (112), Expect = 3e-06
Identities = 20/69 (28%), Positives = 41/69 (59%)
Frame = +1
Query: 505 GDLCQELHRCMEGMGTDEDTLVEILCTRTKPEIAAIVDTYERLYDRPLAEHMCSETSGDF 684
GD ++L + M+G G+DE+ ++E+L + + AI ++++ YD+ L + SE SG F
Sbjct: 305 GDCAEKLKKAMKGFGSDEEAIIEVLQSCNLEQRLAIAQSFKQQYDKDLVNELKSELSGKF 364
Query: 685 RRLLTLIVV 711
+ +++
Sbjct: 365 EDAIVALLL 373
Score = 47.6 bits (108), Expect = 1e-05
Identities = 24/46 (52%), Positives = 33/46 (71%)
Frame = +1
Query: 259 TVVGVPNFNAVEDAAALRAAMKGFGTDEQAIIDILTTRSNMQRQAI 396
TVV NF+A + A L+ AMKGFG+DE+AII++L + + QR AI
Sbjct: 295 TVVAAENFDAGDCAEKLKKAMKGFGSDEEAIIEVLQSCNLEQRLAI 340
Score = 32.7 bits (71), Expect = 0.32
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +1
Query: 286 AVEDAAAL-RAAMKGFGTDEQAIIDILTTRSNMQRQAIF 399
A EDA L A K +GTDE ILT RS++Q +A++
Sbjct: 403 AYEDAKNLYEAGEKKWGTDESVFTKILTCRSDLQLRALY 441
Score = 31.9 bits (69), Expect = 0.55
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +1
Query: 295 DAAALRAAMKGFGTDEQAIIDILTTRSN 378
D +L AMKG GT E +I+ L TRSN
Sbjct: 120 DVRSLYYAMKGLGTKEAQLIETLCTRSN 147
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +1
Query: 517 QELHRCMEGMGTDEDTLVEILCTRT 591
+ L+ M+G+GT E L+E LCTR+
Sbjct: 122 RSLYYAMKGLGTKEAQLIETLCTRS 146
>SB_6006| Best HMM Match : Annexin (HMM E-Value=2.4e-25)
Length = 803
Score = 42.3 bits (95), Expect = 4e-04
Identities = 20/31 (64%), Positives = 23/31 (74%)
Frame = +1
Query: 286 AVEDAAALRAAMKGFGTDEQAIIDILTTRSN 378
A++DA L A KGFGTDE A+I IL TRSN
Sbjct: 77 AMKDAKTLYEATKGFGTDEDALISILCTRSN 107
Score = 37.9 bits (84), Expect = 0.008
Identities = 14/22 (63%), Positives = 19/22 (86%)
Frame = +1
Query: 523 LHRCMEGMGTDEDTLVEILCTR 588
LH ++G+GTDED L+EI+CTR
Sbjct: 429 LHDAIKGLGTDEDLLIEIICTR 450
Score = 35.1 bits (77), Expect = 0.059
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +1
Query: 295 DAAALRAAMKGFGTDEQAIIDILTTRSN 378
DA L A+KG GTDE +I+I+ TR N
Sbjct: 425 DAKCLHDAIKGLGTDEDLLIEIICTRKN 452
Score = 34.3 bits (75), Expect = 0.10
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +1
Query: 523 LHRCMEGMGTDEDTLVEILCTRT 591
L+ +G GTDED L+ ILCTR+
Sbjct: 84 LYEATKGFGTDEDALISILCTRS 106
>SB_7681| Best HMM Match : Annexin (HMM E-Value=0)
Length = 426
Score = 42.3 bits (95), Expect = 4e-04
Identities = 36/142 (25%), Positives = 73/142 (51%), Gaps = 5/142 (3%)
Frame = +1
Query: 286 AVEDAAAL-RAAMKGFGTDEQAIIDILTTRSNMQRQAIFTGLHTRVWKRSH*RP-EV*IG 459
A ++A L +A K +GTDE +L +RS Q QA F + ++ +R + +
Sbjct: 14 ATKEAQDLYKAGEKKWGTDESRFNVVLASRSFPQLQATFNE-YIKISQRDIMNSIDREMS 72
Query: 460 WSLR---RCNRGSDDSP*GDLCQELHRCMEGMGTDEDTLVEILCTRTKPEIAAIVDTYER 630
L+ +C R +P L + M+G GTD+ L+ ++ +R++ ++ I ++ +
Sbjct: 73 GDLKAGLQCAR----NPAEYFADRLWKSMKGAGTDDSLLIRVVVSRSEVDLVEIKASFLQ 128
Query: 631 LYDRPLAEHMCSETSGDFRRLL 696
Y + + + + + SGD+++LL
Sbjct: 129 KYHKTVYKMIEGDCSGDYKKLL 150
>SB_35578| Best HMM Match : Annexin (HMM E-Value=1e-19)
Length = 146
Score = 41.9 bits (94), Expect = 5e-04
Identities = 30/86 (34%), Positives = 41/86 (47%)
Frame = +1
Query: 334 TDEQAIIDILTTRSNMQRQAIFTGLHTRVWKRSH*RPEV*IGWSLRRCNRGSDDSP*GDL 513
T+E +I IL RSN QR I T K + + +L C +
Sbjct: 2 TNEAELIGILANRSNAQRVEIRKRYKTMYGKDLMNDLKSELSGNLEECLLAMMEPSVLYD 61
Query: 514 CQELHRCMEGMGTDEDTLVEILCTRT 591
+ L R M G GTDE+TL++ILCTR+
Sbjct: 62 AKCLRRGMRGAGTDEETLIDILCTRS 87
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/28 (64%), Positives = 21/28 (75%)
Frame = +1
Query: 295 DAAALRAAMKGFGTDEQAIIDILTTRSN 378
DA LR M+G GTDE+ +IDIL TRSN
Sbjct: 61 DAKCLRRGMRGAGTDEETLIDILCTRSN 88
Score = 39.1 bits (87), Expect = 0.004
Identities = 15/27 (55%), Positives = 22/27 (81%)
Frame = +2
Query: 419 YGRDLIEDLKSELGGHFEDVIVALMTP 499
YG+DL+ DLKSEL G+ E+ ++A+M P
Sbjct: 30 YGKDLMNDLKSELSGNLEECLLAMMEP 56
>SB_22953| Best HMM Match : EGF_2 (HMM E-Value=1.3e-14)
Length = 635
Score = 33.5 bits (73), Expect = 0.18
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +1
Query: 457 GWSLRRCNRGSDDSP*GDLCQELHRCMEGMGTDEDT 564
GW+ +RC R D GD C+ + +CM G D T
Sbjct: 206 GWTGKRCERPCDSGYYGDECKRVCQCMNGATCDHVT 241
>SB_57080| Best HMM Match : EGF_CA (HMM E-Value=1.4013e-43)
Length = 360
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Frame = -3
Query: 699 CQEAAEVARRLGAHVLGQRAV----VQSFVCVHNSGYLGLGSGAEDLNE 565
CQ+ E A G+H A V SF C N+GY G G +D NE
Sbjct: 185 CQDTNECAD--GSHTCSINAACTNTVGSFTCACNAGYTGNGHTCQDTNE 231
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/49 (34%), Positives = 21/49 (42%)
Frame = -3
Query: 711 DDNECQEAAEVARRLGAHVLGQRAVVQSFVCVHNSGYLGLGSGAEDLNE 565
D NEC + + A V SF C N+GY G G +D NE
Sbjct: 146 DTNECADGSHTCSINAACT----NTVGSFTCACNAGYTGNGHTCQDTNE 190
>SB_45154| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45)
Length = 486
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = -3
Query: 711 DDNECQEAAEVARRLGAHVLGQRAV----VQSFVCVHNSGYLGLGSGAEDLNE 565
D + CQ+ E A G+H +A V SF C +G+ G G +D+NE
Sbjct: 398 DGHTCQDINECAD--GSHTCSYKATCTNTVGSFTCACKAGHTGDGHTCQDINE 448
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 4/38 (10%)
Frame = -3
Query: 666 GAHVLGQRAV----VQSFVCVHNSGYLGLGSGAEDLNE 565
G+H A V SF C N GY G G +D+NE
Sbjct: 370 GSHTCSNNATCTNTVGSFTCACNVGYTGDGHTCQDINE 407
>SB_48470| Best HMM Match : HNOB (HMM E-Value=0)
Length = 681
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = -1
Query: 587 LVQRISTRVSSSVPIPSMQRCSSWHRSPQGE-SSEPRLHLRSD 462
L + S V+ S+P PS +R S + SPQ +PR+HL+ +
Sbjct: 530 LSEEESDGVTVSLPSPSKRRDSIYSDSPQDNVKKQPRIHLKGE 572
>SB_29145| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1090
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +3
Query: 597 RDSRYCGHIRTIVRPPAGRAHVLRDVGRLPPPPDTH 704
R S+ G + R G +LR++ LPPPPDTH
Sbjct: 943 RGSQVVGAFIPVWRQKVGN-FLLRNLQELPPPPDTH 977
>SB_9772| Best HMM Match : EGF_CA (HMM E-Value=3.9e-25)
Length = 83
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
Frame = -3
Query: 666 GAHVLGQRAV----VQSFVCVHNSGYLGLGSGAEDLNEGVFIRAHTLHATVQLLAQVSS 502
G+H +A V SF C +GY G G +D+NE I +H H+ + SS
Sbjct: 8 GSHTCSNKATCTNTVGSFTCACKAGYTGDGHTCQDINE-CEIGSHDCHSDALCINYPSS 65
>SB_33077| Best HMM Match : R3H (HMM E-Value=0.38)
Length = 332
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -1
Query: 551 VPIPSMQRCSSWHRSPQGESSEPRLHLRSD 462
+P QR ++HRS Q S PR H+R +
Sbjct: 1 MPHLQQQRIENYHRSQQASSQLPRCHIRPE 30
>SB_39667| Best HMM Match : rve (HMM E-Value=9e-32)
Length = 1845
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = -2
Query: 613 Q*RLSRAWFWCRGSQRGCLHPCPYPPCNGAAPGTGLLRGSH 491
Q RLS WFW G + H +PP + G L R H
Sbjct: 1238 QERLSNIWFWTHGCNQ---HDSNFPPNQSSILGFHLTRSPH 1275
>SB_19340| Best HMM Match : EGF_CA (HMM E-Value=3.8e-27)
Length = 888
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/49 (34%), Positives = 21/49 (42%)
Frame = -3
Query: 711 DDNECQEAAEVARRLGAHVLGQRAVVQSFVCVHNSGYLGLGSGAEDLNE 565
D NEC + + A V SF C N+GY G G +D NE
Sbjct: 680 DTNECADGSHTCSINAACT----NTVGSFTCACNAGYTGNGHTCQDTNE 724
>SB_52151| Best HMM Match : TPR_1 (HMM E-Value=0)
Length = 1137
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +3
Query: 357 YIDYQVQHAAASHIHRPSHESMEEISLK 440
YID V+ A A HIHR + ES E+ SL+
Sbjct: 706 YIDRMVKEANA-HIHRKNDESFEDRSLR 732
>SB_19234| Best HMM Match : Extensin_2 (HMM E-Value=0.23)
Length = 880
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +2
Query: 374 PTCSGKPYSQAFTREYGRDLIEDL--KSELGGHFEDVIVALMTPPEETCARSCT 529
P +P Q + R + E++ KS GHF ++V + P EE R+C+
Sbjct: 815 PEPEPEPVPQDLANDSFRTICENIHRKSYSHGHFASMMVKELYPSEERAGRNCS 868
>SB_1528| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2409
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +3
Query: 576 PLHQNQARDSRYCGHIRTIVRPPAGRAHVLRDVGRLPPPP 695
PL + + + CG R V P R +L LPPPP
Sbjct: 1712 PLSERSCKTTSSCGSRRKKVLKPPPRLAILNWADLLPPPP 1751
>SB_56223| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1719
Score = 27.9 bits (59), Expect = 9.0
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +1
Query: 217 KSSHLNRNGL-SESPTVVGVPNFNAVEDAAALRAAMKGFGTDEQAIIDILTTR 372
+SS N G+ + SPTVVGV N D+ A R+ D+Q+ D +R
Sbjct: 1037 ESSKANEEGIGTRSPTVVGVTNVTEKTDSKA-RSVDSNQSIDKQSTKDSNVSR 1088
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,892,205
Number of Sequences: 59808
Number of extensions: 526350
Number of successful extensions: 1491
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1341
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1491
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1962001171
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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