Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021766
         (731 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    24   1.7  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    23   2.2  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    23   3.0  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           23   3.0  
S78458-1|AAB34402.1|   46|Apis mellifera apamin protein.               22   5.2  
DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein ...    22   6.8  
AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein ...    22   6.8  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   9.0  

>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = -3

Query: 366 SQYINDRLLVCTKAFHGGPQ 307
           S Y N   L CT  F GGPQ
Sbjct: 6   SMYNNVSPLQCTSPFLGGPQ 25


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +3

Query: 378 HAAASHIHRPSHESMEEISL 437
           H A S+IH P H  +E   +
Sbjct: 369 HVAISYIHDPDHRYLESFGV 388


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 11/48 (22%), Positives = 22/48 (45%)
 Frame = +1

Query: 130 FFLQQSYSVTKLEIWIR*KPPITFLYF*YKSSHLNRNGLSESPTVVGV 273
           FF+       +++  +  + P+ F Y+ YK +H     +S +    GV
Sbjct: 416 FFITDGEKAARMQAKVN-RQPVWFYYYTYKGAHSISEIMSGTSNKYGV 462


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 11/48 (22%), Positives = 22/48 (45%)
 Frame = +1

Query: 130 FFLQQSYSVTKLEIWIR*KPPITFLYF*YKSSHLNRNGLSESPTVVGV 273
           FF+       +++  +  + P+ F Y+ YK +H     +S +    GV
Sbjct: 416 FFITDGEKAARMQAKVN-RQPVWFYYYTYKGAHSISEIMSGTSNKYGV 462


>S78458-1|AAB34402.1|   46|Apis mellifera apamin protein.
          Length = 46

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 10/22 (45%), Positives = 10/22 (45%)
 Frame = -2

Query: 547 PYPPCNGAAPGTGLLRGSHQSH 482
           P  PCN  AP T L     Q H
Sbjct: 24  PVMPCNCKAPETALCARRCQQH 45


>DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein 4
           protein.
          Length = 128

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -1

Query: 722 RGPPTTMSVRRRRKSPDVSEHMCS 651
           +GP T  +   +R  PD  E+ CS
Sbjct: 53  QGPCTPDAAELKRNLPDALENECS 76


>AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein
           protein.
          Length = 128

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -1

Query: 722 RGPPTTMSVRRRRKSPDVSEHMCS 651
           +GP T  +   +R  PD  E+ CS
Sbjct: 53  QGPCTPDAAELKRNLPDALENECS 76


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 640  RPLAEHMCSETSGDFRRL 693
            RPL+EH+ S    D+  L
Sbjct: 1328 RPLSEHIYSSIDSDYSTL 1345


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 214,437
Number of Sequences: 438
Number of extensions: 5121
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22779405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)