Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021765
(721 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0877 + 21230447-21230815,21231855-21232208,21232417-212325... 42 7e-04
03_05_0843 + 28126480-28127007,28127092-28127457,28129388-281294... 42 7e-04
12_01_1055 - 10861665-10861829,10862827-10863171,10864374-108646... 39 0.003
08_01_0359 + 3152483-3152857,3154493-3154855,3155133-3155211,315... 38 0.011
03_05_0172 - 21488504-21488752,21488862-21489611,21489691-214897... 34 0.13
03_05_0599 - 26012956-26013316,26013444-26013736,26013813-260140... 33 0.23
08_02_0209 + 14321313-14321750 32 0.40
07_01_0278 + 2039873-2039896,2040342-2040407,2040842-2040903,204... 31 0.92
06_01_0989 + 7672764-7672904,7673017-7673067,7673176-7673296,767... 31 0.92
06_01_0595 + 4287106-4287957 30 1.6
06_02_0017 - 10649527-10651183,10651264-10652363 30 2.1
04_04_1542 - 34264994-34265331,34266195-34267029 29 4.9
03_05_0559 - 25610474-25610951,25611149-25611890,25612355-256127... 29 4.9
07_01_0056 + 428297-428332,428574-430127,430209-430274 28 6.5
02_01_0740 - 5511434-5511547,5511952-5512023,5512106-5512300,551... 28 6.5
01_03_0308 - 14883728-14884120 28 6.5
11_06_0177 + 20936072-20937550 28 8.6
08_01_0927 - 9123473-9123589,9124534-9124616,9125177-9125252,912... 28 8.6
06_02_0135 + 12188739-12189086,12189191-12189272,12189397-121895... 28 8.6
05_01_0274 - 2119122-2119775,2121457-2121570,2121895-2122203,212... 28 8.6
04_04_0825 + 28443961-28444099,28444527-28444603,28444710-284447... 28 8.6
01_06_1588 + 38474698-38477169 28 8.6
>10_08_0877 +
21230447-21230815,21231855-21232208,21232417-21232504,
21232844-21233268,21233477-21233632,21233849-21234016,
21234170-21234310,21234393-21234629,21234710-21234823,
21235096-21235272
Length = 742
Score = 41.5 bits (93), Expect = 7e-04
Identities = 17/31 (54%), Positives = 24/31 (77%)
Frame = +3
Query: 156 LSGQLYKYTNVVKGWQQRWFAVDPETGVLSY 248
++G LYK+TN+ KGW+ RWFA+ GVL+Y
Sbjct: 50 VAGVLYKWTNIGKGWRPRWFAI--RGGVLAY 78
>03_05_0843 +
28126480-28127007,28127092-28127457,28129388-28129487,
28130266-28130546,28130643-28130705,28131276-28131431,
28131913-28132080,28132158-28132298,28132714-28132840,
28132888-28132994,28134142-28134372,28134446-28134559,
28135091-28135261
Length = 850
Score = 41.5 bits (93), Expect = 7e-04
Identities = 18/32 (56%), Positives = 23/32 (71%)
Frame = +3
Query: 156 LSGQLYKYTNVVKGWQQRWFAVDPETGVLSYY 251
+SG LYK+ N +GW+ RWFA+ GVLSYY
Sbjct: 89 ISGILYKWVNYGRGWRPRWFAL--HDGVLSYY 118
Score = 31.5 bits (68), Expect = 0.70
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +2
Query: 281 PGQPARGEAHLAAAVICPSDEDSKTFTINCASGDMLKLRATDARARQEWVDGLRAIAEI 457
P +P GE HL + + S D + F+I + L LRA R WV+ L+A E+
Sbjct: 166 PRKPI-GEIHLKVSSVRESRSDDRRFSIFSGT-KRLHLRAETREDRAAWVEALQATKEM 222
>12_01_1055 -
10861665-10861829,10862827-10863171,10864374-10864682,
10864813-10864968,10865669-10866117,10869275-10869359,
10869944-10870300,10870672-10871076
Length = 756
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/32 (53%), Positives = 23/32 (71%)
Frame = +3
Query: 156 LSGQLYKYTNVVKGWQQRWFAVDPETGVLSYY 251
++G L+K+ N KGW+ RWF + E GVLSYY
Sbjct: 56 VAGVLHKWVNYGKGWRLRWFVL--EGGVLSYY 85
>08_01_0359 +
3152483-3152857,3154493-3154855,3155133-3155211,
3155473-3155879,3156342-3156497,3156728-3156895,
3156991-3157131,3157739-3157966,3158063-3158176,
3158293-3158448
Length = 728
Score = 37.5 bits (83), Expect = 0.011
Identities = 15/31 (48%), Positives = 24/31 (77%)
Frame = +3
Query: 156 LSGQLYKYTNVVKGWQQRWFAVDPETGVLSY 248
++G L+K+TN +GW++RWF++ GVLSY
Sbjct: 48 VAGVLHKWTNYGRGWRERWFSL--HDGVLSY 76
>03_05_0172 -
21488504-21488752,21488862-21489611,21489691-21489789,
21489862-21490776,21490847-21490976,21491438-21491583,
21491801-21491896,21492521-21492613,21492702-21492755,
21492897-21492956,21493046-21493171,21493283-21493366,
21493444-21493587,21493667-21493963
Length = 1080
Score = 33.9 bits (74), Expect = 0.13
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +2
Query: 455 IHTKAMGANPPLQPREQLRSTTPWRRPGSSYKRPNSVTRPSRAA 586
+H A+PP+ P + S P P SS P S PS+AA
Sbjct: 39 LHPNLAAASPPMSPAAKNSSAAPGASPRSSKPVPTSAAPPSKAA 82
>03_05_0599 -
26012956-26013316,26013444-26013736,26013813-26014040,
26014666-26014897,26015392-26015475,26015562-26015623,
26016263-26016367,26016458-26016481
Length = 462
Score = 33.1 bits (72), Expect = 0.23
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +3
Query: 156 LSGQLYKYTNVVKGWQQRWFAVDPETGVLSYYLMMDQ 266
L G L K + ++ W +RW +DP +G + Y + ++
Sbjct: 33 LQGPLLKRSETLRKWNERWVILDPTSGKMEYKIRRNE 69
>08_02_0209 + 14321313-14321750
Length = 145
Score = 32.3 bits (70), Expect = 0.40
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +1
Query: 469 DGGQPAPAAERAAPVHDAMASARQQLQATELSDAA 573
DGG P P+A AP++ A R + TEL +AA
Sbjct: 39 DGGAPLPSATFPAPIYVAEERRRWSINPTELQEAA 73
>07_01_0278 +
2039873-2039896,2040342-2040407,2040842-2040903,
2042839-2043067,2043787-2044014,2044177-2044469,
2044594-2044909
Length = 405
Score = 31.1 bits (67), Expect = 0.92
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = +3
Query: 171 YKYTNVVKGWQQRWFAVDPETGVLSY 248
+K++ ++ W +RW +DP TG + Y
Sbjct: 25 FKFSYELRKWNERWVILDPATGKMEY 50
>06_01_0989 +
7672764-7672904,7673017-7673067,7673176-7673296,
7673406-7673510,7673963-7674024,7674398-7674515,
7674596-7674932,7675389-7675536,7675632-7675733,
7675824-7675943,7676436-7676519,7676622-7676749,
7677351-7677435,7677566-7677713,7677971-7678047,
7678187-7678243,7678423-7678561,7678642-7678796,
7679003-7679116,7679208-7679275,7679830-7679996,
7680245-7680453
Length = 911
Score = 31.1 bits (67), Expect = 0.92
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 159 SGQLYKYTNVVKGWQQRWFAVDPETGVLSY 248
+G L K + GW +RWF ++ ++G L Y
Sbjct: 583 AGYLLKKSAKTNGWSRRWFVLNEKSGKLGY 612
>06_01_0595 + 4287106-4287957
Length = 283
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +1
Query: 475 GQPAPAAERAAPVHDAMASARQQLQATELSD-AALARCIESSDSPFPHTDPDLLLLKATS 651
G PAPA + A ++D+ + R A ++SD A ++R +++ F PDL +L A +
Sbjct: 69 GDPAPAEQLVASLNDSATAPRAVAVAADVSDHAQVSRLFDAAREAF---GPDLHVLVAAA 125
>06_02_0017 - 10649527-10651183,10651264-10652363
Length = 918
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +1
Query: 469 DGGQPAPAAERAAPVHDAMASARQQLQATELSDAAL 576
+GG A + AP+ M S Q Q T+++DAAL
Sbjct: 678 EGGSTDTEASQPAPLIKGMGSTSQATQITDITDAAL 713
>04_04_1542 - 34264994-34265331,34266195-34267029
Length = 390
Score = 28.7 bits (61), Expect = 4.9
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -3
Query: 509 GAALSAAGAGWPPSPWCVSQQW 444
GAA GAG PP+P Q+W
Sbjct: 91 GAAAGGGGAGSPPTPRSAEQRW 112
>03_05_0559 -
25610474-25610951,25611149-25611890,25612355-25612744,
25613041-25613099,25613186-25613326,25613449-25613545,
25614999-25615185
Length = 697
Score = 28.7 bits (61), Expect = 4.9
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = -3
Query: 710 YCCWRCSTPRHCSRHCMLAADVAFRSNK 627
Y C+RC P H HC D F K
Sbjct: 201 YVCYRCRIPGHFIHHCPTIGDPKFDDYK 228
>07_01_0056 + 428297-428332,428574-430127,430209-430274
Length = 551
Score = 28.3 bits (60), Expect = 6.5
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +1
Query: 271 HNTAWTAGQGGGSFSRSSDMPKR*RLQDLHHKLRVR 378
++T ++G GGG+ RS P+R R +D+ K + R
Sbjct: 87 YSTRSSSGGGGGASERSVSPPRRSRSRDVRKKKKER 122
>02_01_0740 -
5511434-5511547,5511952-5512023,5512106-5512300,
5512408-5512611,5512690-5512848,5513144-5513249,
5513387-5513554,5513644-5513834,5514410-5514634,
5514818-5514935,5515023-5515195,5515280-5515327,
5515484-5515589,5515697-5515802,5516211-5516332,
5516661-5516741,5516844-5516934,5517036-5517132,
5517287-5517919
Length = 1002
Score = 28.3 bits (60), Expect = 6.5
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Frame = +1
Query: 484 APAAERAAPVHDAMASARQQLQATELSDAALARC----IESSDSPFPHTDPDLLLLKATS 651
APA + + +HD +++ Q + L AA RC IE+ + + D L A S
Sbjct: 574 APAVQIFSVLHDILSNEAQNILRNYLQTAAAKRCRRHMIETDEFMSSNNDSLLTDPMAIS 633
Query: 652 AASMQCLLQCLGV 690
AA ++ C+ +
Sbjct: 634 AAYLKMKTICINI 646
>01_03_0308 - 14883728-14884120
Length = 130
Score = 28.3 bits (60), Expect = 6.5
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +1
Query: 520 AMASARQQLQATELSDAALARCIESSDSPFPHTDPDLLLLKATSAA 657
AMA++R AT L + +S SPFP T P ++ + T A
Sbjct: 22 AMAASRTDTGATALPSPSPIENSTASRSPFPTTSPSMIDEQTTERA 67
>11_06_0177 + 20936072-20937550
Length = 492
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +3
Query: 450 LRYTPRRWGPTRPCSRESSSGPRRHGVGQAAATSDRT 560
++Y PRRW P + +G VG A + SD T
Sbjct: 365 VKYLPRRWCVLNPNVTDDDAGRLADNVGYACSHSDCT 401
>08_01_0927 -
9123473-9123589,9124534-9124616,9125177-9125252,
9125641-9125740,9125996-9126064,9126122-9126207,
9126293-9126430,9126688-9126810,9128130-9129719,
9129929-9130402
Length = 951
Score = 27.9 bits (59), Expect = 8.6
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = +1
Query: 499 RAAPVHDAMASARQQLQATELSDAALARCIESSDSPFPHTDPDLLLLKATSAA 657
R+A +H+A+ A L+ A + + P PHT P LL A S A
Sbjct: 169 RSADLHNALIRALAGSARPHLALPLYAHLLRAGHHPTPHTLPSLLKSLALSPA 221
>06_02_0135 +
12188739-12189086,12189191-12189272,12189397-12189527,
12189626-12189712,12189794-12189872,12190520-12190608,
12190765-12190806,12191030-12191149,12191819-12191968,
12192066-12192137,12192293-12192541
Length = 482
Score = 27.9 bits (59), Expect = 8.6
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +3
Query: 408 PARARSGSTGSGPLLRY--TPRRWGPTRPCSRESSSGPRRHGVGQAAA 545
PA +G +GS +R T RR PT P + G R +G+AAA
Sbjct: 29 PALGAAGRSGSRLRVRSERTRRRDSPTMPTAASERDGGGRAALGKAAA 76
>05_01_0274 -
2119122-2119775,2121457-2121570,2121895-2122203,
2123743-2123904,2124046-2124129,2124315-2124500
Length = 502
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +1
Query: 472 GGQPAPAAERAAPVHDAMASARQQLQATELSD 567
GG+ APAAE A P A S R + +A +SD
Sbjct: 220 GGEQAPAAEMA-PCRKARVSVRARSEAPMISD 250
>04_04_0825 +
28443961-28444099,28444527-28444603,28444710-28444758,
28445283-28445367,28445506-28445755,28447053-28447373
Length = 306
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/48 (29%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = -2
Query: 399 ALSFNMSPDAQFMVKVLESSSLGH--ITAAAK*ASPLAGCPGCIVSPG 262
+LS ++ PD + M + S S ++++++ S +G GC+V+PG
Sbjct: 247 SLSLSLGPDPKCMPAIASSPSESSCILSSSSRSFSDCSGNSGCLVAPG 294
>01_06_1588 + 38474698-38477169
Length = 823
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +2
Query: 251 SYDGPGDTIQPGQPARGEAHLAAA-VICPSDEDSKTF 358
S+D P DT+ PGQP A L+ V+ P+ + F
Sbjct: 147 SFDYPTDTLLPGQPVTATARLSTTDVLHPTSHYALRF 183
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,079,723
Number of Sequences: 37544
Number of extensions: 466159
Number of successful extensions: 1982
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1891
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1980
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1874582652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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