Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021765
         (721 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    24   1.3  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          23   3.8  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    22   5.1  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   5.1  

>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -2

Query: 267 PGPS*DNKIEHQSQDQQQTIFAAIPSL 187
           PG S    ++  + +QQ T+F AIP +
Sbjct: 54  PGASLPIDVDVYNTEQQSTVFVAIPRI 80


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +2

Query: 476 ANPPLQPREQLRSTTPWRRPGSSYKRPNSVTRP 574
           ++PP +P     + T  +R    YKRP +   P
Sbjct: 136 SSPPREPGTPRINFTKLKRHHPRYKRPRTTFEP 168


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -3

Query: 290 AVQAVLCLLVHHK 252
           A  AV CLL HH+
Sbjct: 529 ATMAVACLLFHHR 541


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -3

Query: 290 AVQAVLCLLVHHK 252
           A  AV CLL HH+
Sbjct: 619 ATMAVACLLFHHR 631


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,733
Number of Sequences: 438
Number of extensions: 3949
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22292145
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)