Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021764
(738 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 139 3e-34
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 136 3e-33
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 126 4e-30
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 125 8e-30
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 116 5e-27
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 63 5e-11
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 46 6e-06
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 32 0.074
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 31 0.17
SPAC25B8.04c |||mitochondrial splicing suppressor |Schizosacchar... 29 0.91
SPAC6G10.10c |||human hmmtag2 homolog|Schizosaccharomyces pombe|... 27 2.8
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 26 4.9
SPBC216.02 |mcp5|num1, mug21|cortical anchoring factor for dynei... 26 6.4
SPCC306.05c |ins1||INSIG domain protein|Schizosaccharomyces pomb... 25 8.5
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 25 8.5
SPAC823.11 |||sphingosine-1-phosphate phosphatase |Schizosacchar... 25 8.5
SPAC4G9.04c |||cleavage and polyadenylation specificity factor |... 25 8.5
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 139 bits (337), Expect = 3e-34
Identities = 66/76 (86%), Positives = 71/76 (93%)
Frame = +3
Query: 510 QRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIE 689
QRQATKDAG I+GLNVLRIINEPTAAAIAYGLD+ GE NVLIFDLGGGTFDVS+LTIE
Sbjct: 152 QRQATKDAGLIAGLNVLRIINEPTAAAIAYGLDRSNQGESNVLIFDLGGGTFDVSLLTIE 211
Query: 690 DGIFEVKSTAGDTHLG 737
+GIFEVK+TAGDTHLG
Sbjct: 212 EGIFEVKATAGDTHLG 227
Score = 135 bits (326), Expect = 7e-33
Identities = 63/97 (64%), Positives = 75/97 (77%)
Frame = +1
Query: 238 PQQHNIDAKRLIGRKFEDATVQADMKHWXFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 417
P DAKRLIGRKF+D VQ+DMKHW F+V+S GKP ++V YKGE KTF PEE+SSM
Sbjct: 61 PHNTIFDAKRLIGRKFDDPEVQSDMKHWPFKVISKDGKPVLQVEYKGETKTFTPEEISSM 120
Query: 418 VLTKMKETAEAYLGKTVQNAVITVPAYFNDFKDKPQK 528
VL KM+ETAEAYLG V +AV+TVPAYFND + + K
Sbjct: 121 VLMKMRETAEAYLGGKVTDAVVTVPAYFNDSQRQATK 157
Score = 118 bits (285), Expect = 7e-28
Identities = 54/62 (87%), Positives = 59/62 (95%)
Frame = +2
Query: 68 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 247
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP+N
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHN 63
Query: 248 TI 253
TI
Sbjct: 64 TI 65
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 136 bits (329), Expect = 3e-33
Identities = 65/76 (85%), Positives = 70/76 (92%)
Frame = +3
Query: 510 QRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIE 689
QRQATKDAG I+GLNVLRIINEPTAAAIAYGLD+ E NVLIFDLGGGTFDVS+LTIE
Sbjct: 152 QRQATKDAGLIAGLNVLRIINEPTAAAIAYGLDRSNQHETNVLIFDLGGGTFDVSLLTIE 211
Query: 690 DGIFEVKSTAGDTHLG 737
+GIFEVK+TAGDTHLG
Sbjct: 212 EGIFEVKATAGDTHLG 227
Score = 127 bits (307), Expect = 1e-30
Identities = 59/97 (60%), Positives = 73/97 (75%)
Frame = +1
Query: 238 PQQHNIDAKRLIGRKFEDATVQADMKHWXFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 417
P DAKRLIGR+F D VQ+DMKHW F+V+ GKP I+V +KGE KTF PEE+SSM
Sbjct: 61 PHNTIFDAKRLIGRRFNDPEVQSDMKHWPFKVIEKDGKPLIQVEFKGETKTFTPEEISSM 120
Query: 418 VLTKMKETAEAYLGKTVQNAVITVPAYFNDFKDKPQK 528
VL KM+E+AEA+LG V +AV+TVPAYFND + + K
Sbjct: 121 VLLKMRESAEAFLGGKVTDAVVTVPAYFNDSQRQATK 157
Score = 118 bits (285), Expect = 7e-28
Identities = 54/62 (87%), Positives = 59/62 (95%)
Frame = +2
Query: 68 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 247
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP+N
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHN 63
Query: 248 TI 253
TI
Sbjct: 64 TI 65
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 126 bits (303), Expect = 4e-30
Identities = 60/76 (78%), Positives = 66/76 (86%)
Frame = +3
Query: 510 QRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIE 689
QR ATKDAG I+GLNVLRIINEPTAAAIAYGLD K +NVLIFDLGGGTFDVS+L I+
Sbjct: 156 QRAATKDAGAIAGLNVLRIINEPTAAAIAYGLDAKSDKPKNVLIFDLGGGTFDVSLLKIQ 215
Query: 690 DGIFEVKSTAGDTHLG 737
G+FEV +TAGDTHLG
Sbjct: 216 GGVFEVLATAGDTHLG 231
Score = 112 bits (269), Expect = 6e-26
Identities = 52/90 (57%), Positives = 66/90 (73%)
Frame = +1
Query: 238 PQQHNIDAKRLIGRKFEDATVQADMKHWXFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 417
P+ DAKRLIGR++ED Q D+KHW F+V+ + G P I+V Y GE K F +E+S+M
Sbjct: 65 PRNTVFDAKRLIGRRYEDPETQKDIKHWPFKVIDNNGIPTIEVNYLGEKKQFTAQEISAM 124
Query: 418 VLTKMKETAEAYLGKTVQNAVITVPAYFND 507
VLTKMKE +EA L K V+ AVITVPAYF+D
Sbjct: 125 VLTKMKEISEAKLNKRVEKAVITVPAYFSD 154
Score = 105 bits (253), Expect = 5e-24
Identities = 47/62 (75%), Positives = 54/62 (87%)
Frame = +2
Query: 68 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 247
A+GIDLGTTYSCV V++ VEII NDQG RTTPS+VAFT+TERL+GDAAKNQ AMNP N
Sbjct: 8 AIGIDLGTTYSCVAVWETANVEIIPNDQGARTTPSFVAFTETERLVGDAAKNQAAMNPRN 67
Query: 248 TI 253
T+
Sbjct: 68 TV 69
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 125 bits (301), Expect = 8e-30
Identities = 56/76 (73%), Positives = 72/76 (94%)
Frame = +3
Query: 510 QRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIE 689
QRQATKDAGTI+GLNV+RI+NEPTAAAIAYGLDK T E++++++DLGGGTFDVS+L+I+
Sbjct: 185 QRQATKDAGTIAGLNVIRIVNEPTAAAIAYGLDKTDT-EKHIVVYDLGGGTFDVSLLSID 243
Query: 690 DGIFEVKSTAGDTHLG 737
+G+FEV +T+GDTHLG
Sbjct: 244 NGVFEVLATSGDTHLG 259
Score = 110 bits (264), Expect = 2e-25
Identities = 50/97 (51%), Positives = 71/97 (73%)
Frame = +1
Query: 238 PQQHNIDAKRLIGRKFEDATVQADMKHWXFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 417
P+ D KRLIGRKF++ T+ D+K + F +V+D +P ++V G+ K F PEE+S+M
Sbjct: 94 PENTIFDIKRLIGRKFDEKTMAKDIKSFPFHIVNDKNRPLVEVNVGGKKKKFTPEEISAM 153
Query: 418 VLTKMKETAEAYLGKTVQNAVITVPAYFNDFKDKPQK 528
+L+KMK+TAEAYLGK V +AV+TVPAYFND + + K
Sbjct: 154 ILSKMKQTAEAYLGKPVTHAVVTVPAYFNDAQRQATK 190
Score = 104 bits (249), Expect = 2e-23
Identities = 46/61 (75%), Positives = 53/61 (86%)
Frame = +2
Query: 71 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNT 250
+GIDLGTTYSCV V ++G+VEIIANDQGNR TPSYVAFT+ ERL+G+AAKNQ NP NT
Sbjct: 38 IGIDLGTTYSCVAVMKNGRVEIIANDQGNRITPSYVAFTEDERLVGEAAKNQAPSNPENT 97
Query: 251 I 253
I
Sbjct: 98 I 98
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 116 bits (278), Expect = 5e-27
Identities = 54/76 (71%), Positives = 65/76 (85%)
Frame = +3
Query: 510 QRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIE 689
QRQATK AG I+GLNVLR++NEPTAAA+AYGLDKK + V +FDLGGGTFD+SIL +
Sbjct: 198 QRQATKAAGAIAGLNVLRVVNEPTAAALAYGLDKK--NDAIVAVFDLGGGTFDISILELN 255
Query: 690 DGIFEVKSTAGDTHLG 737
+G+FEV+ST GDTHLG
Sbjct: 256 NGVFEVRSTNGDTHLG 271
Score = 80.6 bits (190), Expect = 2e-16
Identities = 39/97 (40%), Positives = 58/97 (59%)
Frame = +1
Query: 238 PQQHNIDAKRLIGRKFEDATVQADMKHWXFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 417
P+ KRLIGR+F++ VQ D+K +++V + KT+ P ++
Sbjct: 110 PENTFFATKRLIGRRFKEPEVQRDIKEVPYKIVEHSNGD---AWLEARGKTYSPSQIGGF 166
Query: 418 VLTKMKETAEAYLGKTVQNAVITVPAYFNDFKDKPQK 528
+L+KM+ETA YLGK V+NAV+TVPAYFND + + K
Sbjct: 167 ILSKMRETASTYLGKDVKNAVVTVPAYFNDSQRQATK 203
Score = 77.4 bits (182), Expect = 2e-15
Identities = 36/65 (55%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Frame = +2
Query: 59 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAM 235
K P +GIDLGTT SC+ + + ++IAN +G RTTPS VAFT D ERL+G +AK Q +
Sbjct: 49 KGPVIGIDLGTTTSCLAIMEGQTPKVIANAEGTRTTPSVVAFTKDGERLVGVSAKRQAVI 108
Query: 236 NPNNT 250
NP NT
Sbjct: 109 NPENT 113
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 62.9 bits (146), Expect = 5e-11
Identities = 34/81 (41%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Frame = +3
Query: 507 LQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGE----RNVLIFDLGGGTFDVS 674
+QR+A +A I+GLN LR++N+ AAA+ YG+ K E R V I D G + VS
Sbjct: 155 IQRRALLEAANIAGLNPLRLMNDNAAAALTYGITKTDLPEPESPRRVAIVDFGHSNYSVS 214
Query: 675 ILTIEDGIFEVKSTAGDTHLG 737
I+ G F +KST D +LG
Sbjct: 215 IVEFSRGQFHIKSTVCDRNLG 235
Score = 55.2 bits (127), Expect = 9e-09
Identities = 23/66 (34%), Positives = 42/66 (63%)
Frame = +2
Query: 56 AKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 235
++ VGID G + + + V ++ +++I N+ NR+TPS V++ + R +G+AAK+ A
Sbjct: 3 SRTNVVGIDFGNSKTVIAVARNRAIDVIVNEVSNRSTPSLVSYGERSRFLGEAAKSAEAS 62
Query: 236 NPNNTI 253
N NT+
Sbjct: 63 NFRNTV 68
Score = 44.4 bits (100), Expect = 2e-05
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Frame = +1
Query: 262 KRLIGRKFEDATVQADMKHWXFEVVSD-GGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKE 438
KRL GR ++D ++ ++ +++ G KV Y E+ F ++ + TK+K
Sbjct: 72 KRLAGRTYDDPEIKDIESNFISAKLTEVDGFVGAKVQYLNEETAFSNIQLIAAYFTKIKA 131
Query: 439 TAEAYLGKTVQNAVITVPAYFNDFK 513
AEA L +V + VI++PA+F D +
Sbjct: 132 IAEAELIGSVSDVVISIPAWFTDIQ 156
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 46.0 bits (104), Expect = 6e-06
Identities = 18/62 (29%), Positives = 36/62 (58%)
Frame = +2
Query: 71 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNT 250
+GI G S + + GK +++AN++GNR PS +++ + G A+ Q+ N +N+
Sbjct: 27 IGISFGNQNSSIAFNRDGKTDVLANEEGNRQIPSILSYHGDQEYHGVQARGQLVRNADNS 86
Query: 251 IS 256
++
Sbjct: 87 VT 88
Score = 35.9 bits (79), Expect = 0.006
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +1
Query: 379 EDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDFKDK 519
++K E S L ++ E+AE +LG V V++VP YF D + K
Sbjct: 134 KEKILTAHEASVRHLRRLTESAEDFLGTKVNGCVMSVPVYFTDAQRK 180
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 32.3 bits (70), Expect = 0.074
Identities = 33/154 (21%), Positives = 66/154 (42%), Gaps = 11/154 (7%)
Frame = -2
Query: 659 TAAEVKDKYISFSSTLFVKTVSNRSSSGFIDDSENVQA*DGTCIFCGLSLKSLKYAGTVI 480
+++ + + S SS L T S S+S I S + F S S + I
Sbjct: 565 SSSSIPSTFSSVSSILSSSTSSPSSTSLSISSSST------SSTFSSASTSSPSSISSSI 618
Query: 479 TAFCTVLPR*ASAVSFIFVSTMELTSSGKKVLSSPL-----------YATLILGLPPSLT 333
++ T+L + S + +S+ + S +LSS + Y++ ++ +L
Sbjct: 619 SSSSTILSSPTPSTSSLMISSSSIISGSSSILSSSISTIPISSSLSTYSSSVIPSSSTLV 678
Query: 332 TSKXQCFMSACTVASSNLRPMRRLASILCCWGSS 231
+S +S+ VASS+ P+ +S++ + +S
Sbjct: 679 SSSSSLIVSSSPVASSSSSPIPSSSSLVSTYSAS 712
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 31.1 bits (67), Expect = 0.17
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +2
Query: 71 VGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 247
+ ID GT ++ + + G +EI+ R S VAF ER+ G A N P +
Sbjct: 25 LAIDYGTEWTKAALIKPGIPLEIVLTKDTRRKEQSAVAFKGNERIFGVDASNLATRFPAH 84
Query: 248 TI 253
+I
Sbjct: 85 SI 86
Score = 27.9 bits (59), Expect = 1.6
Identities = 11/45 (24%), Positives = 25/45 (55%)
Frame = +1
Query: 379 EDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDFK 513
+++ + EE+ +M + AE + + + V+TVP +FN+ +
Sbjct: 131 DEENYSLEEIIAMTMEHYISLAEEMAHEKITDLVLTVPPHFNELQ 175
>SPAC25B8.04c |||mitochondrial splicing suppressor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 378
Score = 28.7 bits (61), Expect = 0.91
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 63 HPQ*ESIWVPRTLALVSSSTGRWRSSPTTRAT 158
HP S W+P LVS+ W +SP+++ T
Sbjct: 283 HPLYSSSWIPTLHDLVSTRCSVWLTSPSSQRT 314
>SPAC6G10.10c |||human hmmtag2 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 194
Score = 27.1 bits (57), Expect = 2.8
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = +2
Query: 470 RMQLSRFPRTSMTSKTSHKRCRYHLRLERSPN 565
R LSR R S T+ S + RY R E SPN
Sbjct: 159 RTHLSRHHRHSTTNYHSKRDDRYERRREHSPN 190
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 26.2 bits (55), Expect = 4.9
Identities = 23/111 (20%), Positives = 49/111 (44%)
Frame = -2
Query: 659 TAAEVKDKYISFSSTLFVKTVSNRSSSGFIDDSENVQA*DGTCIFCGLSLKSLKYAGTVI 480
T++ V + +S+ V T + +SS ++ S + + ++ S+ + T I
Sbjct: 1549 TSSSVLNSSTPITSSTVVNTSTPITSSSVVNSSTPITSSTALNTSTPITSSSVLNSSTPI 1608
Query: 479 TAFCTVLPR*ASAVSFIFVSTMELTSSGKKVLSSPLYATLILGLPPSLTTS 327
T+ + S + S+ +TSS S+P+ ++ L P +T+S
Sbjct: 1609 TSSTALNTSTPITSSSVLNSSTPITSSTVLNSSTPITSSTALNTSPPITSS 1659
Score = 25.4 bits (53), Expect = 8.5
Identities = 24/111 (21%), Positives = 49/111 (44%)
Frame = -2
Query: 659 TAAEVKDKYISFSSTLFVKTVSNRSSSGFIDDSENVQA*DGTCIFCGLSLKSLKYAGTVI 480
T++ V + +S+ V T + +SS ++ S + + ++ S+ + T I
Sbjct: 2269 TSSTVVNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPI 2328
Query: 479 TAFCTVLPR*ASAVSFIFVSTMELTSSGKKVLSSPLYATLILGLPPSLTTS 327
T+ V S + S+ +TSS S+P+ ++ L S+T+S
Sbjct: 2329 TSSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTALNTSTSITSS 2379
Score = 25.4 bits (53), Expect = 8.5
Identities = 26/127 (20%), Positives = 58/127 (45%)
Frame = -2
Query: 659 TAAEVKDKYISFSSTLFVKTVSNRSSSGFIDDSENVQA*DGTCIFCGLSLKSLKYAGTVI 480
T++ V + +S+ V T + +SS ++ S + + ++ ++ + T I
Sbjct: 3241 TSSSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPI 3300
Query: 479 TAFCTVLPR*ASAVSFIFVSTMELTSSGKKVLSSPLYATLILGLPPSLTTSKXQCFMSAC 300
T+ T+ S + S+ +TSS S+P+ ++ +L ++T+S S+
Sbjct: 3301 TSSTTLNTSTPITSSSVLNSSTAITSSTALNTSTPITSSSVLNSSTAITSS--SILNSST 3358
Query: 299 TVASSNL 279
V SS++
Sbjct: 3359 PVTSSSV 3365
>SPBC216.02 |mcp5|num1, mug21|cortical anchoring factor for dynein
Mcp5/Num1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 968
Score = 25.8 bits (54), Expect = 6.4
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +2
Query: 491 PRTSMTSKTSHKRCRYHLRL 550
PR ++ SKT+ K+CR +L L
Sbjct: 809 PRNNLKSKTNTKKCRDNLNL 828
>SPCC306.05c |ins1||INSIG domain protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 281
Score = 25.4 bits (53), Expect = 8.5
Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 5/73 (6%)
Frame = -1
Query: 390 GFVFTLICYLDLRFASITDNLEXPVLHVGLHSSIFELTSDETFGIDIVLLGFI-----AT 226
GFVFT + I + + P+L V L S FE FG V+LG
Sbjct: 104 GFVFTYLA------EQIVQDAKLPLLTVNLKSWKFEPPWPAIFGFVAVILGLSYRRMDTK 157
Query: 225 WFLAASPMRRSVS 187
+ L A+P+R S S
Sbjct: 158 YPLGAAPLRPSQS 170
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 25.4 bits (53), Expect = 8.5
Identities = 17/66 (25%), Positives = 31/66 (46%)
Frame = +1
Query: 49 QNGKSTRSRNRSGYHVLLRWCLPAREGGDHRQRPGQQDHSVLCCVHRHRASHRRCRQEPG 228
+NGK T +R +S + W P++E R G D + V R + + +EP
Sbjct: 477 RNGKKTPTRTKSRMQQFINWFKPSKE----RSSNGNSDSASPPPVPRLSITRSQVSREP- 531
Query: 229 GDEPQQ 246
++P++
Sbjct: 532 -EKPEE 536
>SPAC823.11 |||sphingosine-1-phosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 411
Score = 25.4 bits (53), Expect = 8.5
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = -2
Query: 149 GRWR*SPPSRAGRHQRKSTWYPDRFLLRVLLPFCI 45
G W SP S + H ++++ +F +RVL C+
Sbjct: 276 GTWFASPESLSHLHDNLNSYFLLKFFVRVLFGVCM 310
>SPAC4G9.04c |||cleavage and polyadenylation specificity factor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 638
Score = 25.4 bits (53), Expect = 8.5
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +1
Query: 655 AVPSTCPSLPSRMVSSR*NPPPATPTW 735
++PST P++PS +S + PP T ++
Sbjct: 299 SIPSTIPTIPSAYSASVSSQPPLTHSY 325
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,237,610
Number of Sequences: 5004
Number of extensions: 68985
Number of successful extensions: 301
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 295
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 349251756
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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