Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021763
         (725 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_04_0226 + 21073967-21074179,21074711-21074832,21074926-210753...    37   0.019
03_02_0245 + 6754381-6754506,6756099-6756188,6756806-6756921,675...    30   1.6  
02_05_0020 + 25070664-25070692,25070934-25071513,25071605-250718...    28   6.6  
04_03_0306 + 14136338-14136686,14137408-14137442,14137701-141377...    28   8.7  

>02_04_0226 +
           21073967-21074179,21074711-21074832,21074926-21075370,
           21075453-21075559,21075656-21076463,21076691-21077128,
           21077349-21077537,21077616-21077843,21077943-21078140,
           21078304-21078379,21078452-21078593,21078749-21079238
          Length = 1151

 Score = 36.7 bits (81), Expect = 0.019
 Identities = 12/49 (24%), Positives = 33/49 (67%)
 Frame = +1

Query: 571 DNSYQKLVKETMHRAYFDILREQLNSNPPEYKQALILLEDVKQGLFSIL 717
           +  +++ V+ETM +A++D++ + L  + P+Y   + L+++V+  L+ ++
Sbjct: 707 EGGFKEKVRETMEKAFWDVVVDSLRGDMPDYSYLVQLVKEVRDTLYEMV 755


>03_02_0245 +
           6754381-6754506,6756099-6756188,6756806-6756921,
           6757027-6757435
          Length = 246

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
 Frame = +1

Query: 547 SWNHFDPPDNSYQKLVKETM-HRAYFDILREQLNSN-PPEYKQALILLEDVKQGL 705
           SW H D P N  + LV+ T+ +  + + ++E L SN   E KQ++++ ED  + L
Sbjct: 43  SWLHTDLPANKAESLVRITLIYILWPNSIQEVLRSNIIAEVKQSVVINEDGSEKL 97


>02_05_0020 +
           25070664-25070692,25070934-25071513,25071605-25071817,
           25071918-25072207,25072301-25072412,25072539-25072763,
           25072853-25073464
          Length = 686

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 13/47 (27%), Positives = 21/47 (44%)
 Frame = +3

Query: 399 WRTNPLQGQRFHNHRSITTPVCDIGGYYEGCSWNAKQALAHEIAVDN 539
           WRT     +R+ NHR I  P+      Y    W A + +  E  +++
Sbjct: 417 WRTKRTDMERWMNHRQIPQPLKQCVRRYHQYKWLATRGVDEEALLED 463


>04_03_0306 +
           14136338-14136686,14137408-14137442,14137701-14137778,
           14138046-14138124,14138731-14138823,14139472-14139556,
           14140270-14140345,14140669-14140794,14141039-14141137,
           14141238-14141339,14141561-14141671,14141809-14141904,
           14142488-14142539,14142624-14142735,14142879-14142943,
           14144124-14144521,14145236-14145330,14145989-14146015,
           14146081-14146156,14146368-14146421,14146741-14146863,
           14146955-14147023
          Length = 799

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 14/30 (46%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
 Frame = +1

Query: 307 PTSSGSKDQNEANRTSSQPVPM-ASSNSSY 393
           P S+G + + E N+T+SQPV + A+SN  Y
Sbjct: 634 PPSNG-RTERERNKTASQPVQLNATSNGDY 662


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,781,168
Number of Sequences: 37544
Number of extensions: 425428
Number of successful extensions: 1074
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1044
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1074
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1898162308
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)