Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021763
         (725 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66523-2|CAA91410.1|  451|Caenorhabditis elegans Hypothetical pr...    46   4e-05
AF047658-6|AAY86253.1|  295|Caenorhabditis elegans Hypothetical ...    34   0.12 
Z93383-6|CAB07623.1|  283|Caenorhabditis elegans Hypothetical pr...    28   5.9  
Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical pr...    28   7.8  
Z81098-2|CAB03182.1|  961|Caenorhabditis elegans Hypothetical pr...    28   7.8  
U42833-2|AAA83576.1| 1276|Caenorhabditis elegans Hypothetical pr...    28   7.8  

>Z66523-2|CAA91410.1|  451|Caenorhabditis elegans Hypothetical
           protein M05D6.2 protein.
          Length = 451

 Score = 45.6 bits (103), Expect = 4e-05
 Identities = 20/53 (37%), Positives = 32/53 (60%)
 Frame = +1

Query: 562 DPPDNSYQKLVKETMHRAYFDILREQLNSNPPEYKQALILLEDVKQGLFSILL 720
           D P N+ Q+ V+E+MH+AY++ LR  L  +PPE +     L +VK  +   +L
Sbjct: 17  DKPTNAIQRCVQESMHKAYYNQLRRDLAKDPPELEYCFSFLMEVKTMILDDIL 69


>AF047658-6|AAY86253.1|  295|Caenorhabditis elegans Hypothetical
           protein K03H6.6 protein.
          Length = 295

 Score = 33.9 bits (74), Expect = 0.12
 Identities = 15/58 (25%), Positives = 27/58 (46%)
 Frame = +1

Query: 280 HIVMSERENPTSSGSKDQNEANRTSSQPVPMASSNSSYFSGEPIHFRVRGSTITGASP 453
           H VM   +   S+ ++   +      +P+PM S+ + Y    P+ F  RG+ + G  P
Sbjct: 129 HQVMETVQKSLSTSAEASTQVQFVEQEPIPMYSTTTQYDQEPPVTFCERGTMMHGQEP 186


>Z93383-6|CAB07623.1|  283|Caenorhabditis elegans Hypothetical
           protein F54B8.6 protein.
          Length = 283

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = -1

Query: 344 FASFWSLEPELVGFSRSLMTICFCT 270
           + +++  + ++V FS   MTICFCT
Sbjct: 168 YYNYYLTQEQIVHFSIGTMTICFCT 192


>Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical protein
            T01D3.7 protein.
          Length = 2882

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = +1

Query: 307  PTSSGSKDQNEANRTSSQPVPMASSNSSYFSGEPIHFRVRGSTITG 444
            PT+ GS  +     TS++P+  AS ++S  +   I   +R ST+ G
Sbjct: 2778 PTTIGSSSEGPTTATSTEPIYTASPDTSPETEATIGPPIRISTVGG 2823


>Z81098-2|CAB03182.1|  961|Caenorhabditis elegans Hypothetical
           protein K07A12.2 protein.
          Length = 961

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 3/28 (10%)
 Frame = +1

Query: 298 RENPTSSGSKDQNEAN---RTSSQPVPM 372
           R +P+SSGS  QN AN   R+S+ P P+
Sbjct: 892 RSSPSSSGSSGQNAANESGRSSAAPSPI 919


>U42833-2|AAA83576.1| 1276|Caenorhabditis elegans Hypothetical
           protein ZK430.5 protein.
          Length = 1276

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = -2

Query: 142 LNINLLMRNKFMGRKLPAILCFFVDY*G*ICVYLALITD 26
           +  NL +R  F    +PA LCFF  Y G +C  +A + D
Sbjct: 135 MKCNLEVRRFFAA--IPAKLCFFYFYTGELCTAVACLID 171


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,406,407
Number of Sequences: 27780
Number of extensions: 386449
Number of successful extensions: 1051
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 998
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1051
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)