Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021762
         (672 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0742 + 35900505-35900519,35901230-35901281,35901647-359017...    30   1.5  
05_01_0160 + 1081416-1081647,1081840-1082012,1082169-1082246,108...    30   1.9  
05_01_0042 - 290077-290676,291093-291233,291675-291764,292364-29...    28   5.9  

>03_06_0742 +
           35900505-35900519,35901230-35901281,35901647-35901772,
           35902303-35902613,35902745-35902988,35903726-35903976,
           35904071-35904277,35904546-35904713,35904798-35905127,
           35905266-35905400
          Length = 612

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 14/53 (26%), Positives = 26/53 (49%)
 Frame = +2

Query: 191 ESGSPPRVQE*KTQVKQHRSTTDIKQEVNSGQVYVCTICKKSCDEDEWESHVE 349
           E G    VQ+ +  + Q  S+T ++  +   Q Y+  + + SCD D  +  +E
Sbjct: 503 EIGDHNPVQDFEAMLTQRSSSTWVQTAIEEMQKYITALIQDSCDRDNHQKALE 555


>05_01_0160 +
           1081416-1081647,1081840-1082012,1082169-1082246,
           1082372-1082529,1082558-1082709,1083232-1083290,
           1083633-1083912,1084235-1084470,1084601-1084744,
           1084845-1085012
          Length = 559

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 7/58 (12%)
 Frame = +1

Query: 517 LKEHIETIHERALYVCPE--CNKEFVRRSHVTRHMTQ-----SGCHGRQLNLYPCEIC 669
           L  H+ T H+  L+ CP   CN++F  + ++ RH+ +     S C  ++  + P E C
Sbjct: 304 LNRHLLT-HQGKLFACPMEGCNRKFTIKGNIQRHVQEMHKDGSPCESKKEFICPEENC 360


>05_01_0042 -
           290077-290676,291093-291233,291675-291764,292364-292563,
           292685-292743,292827-292942
          Length = 401

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
 Frame = +1

Query: 517 LKEHIETIHERALYVC--PECNKEFVRRSHVTRH 612
           L++H   +H    Y+C  P C K+FV  S + RH
Sbjct: 104 LRKHAH-VHNERQYICQEPGCGKKFVDSSKLKRH 136


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,630,282
Number of Sequences: 37544
Number of extensions: 356050
Number of successful extensions: 867
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 828
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 867
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1703141568
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)