Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021762
(672 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc fi... 31 0.008
L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein pro... 30 0.017
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 27 0.16
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 25 0.66
AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc fi... 23 2.6
U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive o... 23 3.5
L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein pro... 23 3.5
AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin ... 23 3.5
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 21 8.1
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 21 8.1
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 21 8.1
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 21 8.1
DQ069332-1|AAZ32217.1| 296|Apis mellifera RNA polymerase II lar... 21 8.1
AY526236-1|AAS20469.1| 85|Apis mellifera epoxide hydrolase pro... 21 8.1
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 21 8.1
>AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc
finger domain-Z3 isoform protein.
Length = 92
Score = 31.5 bits (68), Expect = 0.008
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = +1
Query: 517 LKEHIETIHERA--LYVCPECNKEFVRRSHVTRH 612
LK H + HE++ LYVC CN+ + ++ +T H
Sbjct: 21 LKRHFQDKHEQSDTLYVCEFCNRRYRTKNSLTTH 54
>L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein
protein.
Length = 74
Score = 30.3 bits (65), Expect = 0.017
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +1
Query: 556 YVCPECNKEFVRRSHVTRHM 615
+ CPEC+K F R H+ HM
Sbjct: 10 FECPECHKRFTRDHHLKTHM 29
Score = 29.1 bits (62), Expect = 0.040
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +1
Query: 517 LKEHIETIHERALYVCPECNKEFVRRSHVTRHMTQSGCHGRQLNLYPCEIC 669
LK H+ Y C C+++FV+ +++ RH+ H + Y CE+C
Sbjct: 25 LKTHMRLHTGEKPYHCSHCDRQFVQVANLRRHLR---VHTGE-RPYACELC 71
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 27.1 bits (57), Expect = 0.16
Identities = 13/56 (23%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +2
Query: 239 QHRSTTDIKQEVNSGQ-VYVCTICKKSCDEDEWESHVEICRMSSNNKQPYCCKECG 403
+H +++G+ + CT+C K+ + + I + ++PY CK CG
Sbjct: 158 EHSGKLHRHMRIHTGERPHKCTVCSKTFIQS---GQLVIHMRTHTGEKPYVCKACG 210
Score = 25.8 bits (54), Expect = 0.38
Identities = 13/42 (30%), Positives = 18/42 (42%)
Frame = +1
Query: 544 ERALYVCPECNKEFVRRSHVTRHMTQSGCHGRQLNLYPCEIC 669
E Y C C K F +++ H+ G G + Y C IC
Sbjct: 58 EEKTYQCLLCQKAFDQKNLYQSHLRSHGKEGE--DPYRCNIC 97
Score = 23.8 bits (49), Expect = 1.5
Identities = 13/52 (25%), Positives = 23/52 (44%)
Frame = +1
Query: 517 LKEHIETIHERALYVCPECNKEFVRRSHVTRHMTQSGCHGRQLNLYPCEICK 672
L H T Y C C+K F + +++ H H ++ Y C++C+
Sbjct: 107 LTRHYRTHTGEKPYQCEYCSKSFSVKENLSVHRR---IHTKE-RPYKCDVCE 154
Score = 22.2 bits (45), Expect = 4.6
Identities = 14/39 (35%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Frame = +1
Query: 556 YVCPECNKEFVRRSHVTRH-MTQSGCHGRQLNLYPCEIC 669
Y C C K F + +TRH T +G Y CE C
Sbjct: 92 YRCNICGKTFAVPARLTRHYRTHTG-----EKPYQCEYC 125
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 25.0 bits (52), Expect = 0.66
Identities = 11/36 (30%), Positives = 13/36 (36%)
Frame = +2
Query: 383 YCCKECGXXXXXXXSHLQHIEMNHSTLPNSVACTKC 490
Y C CG + +H E H NS C C
Sbjct: 372 YTCDVCGKTLSTKLTLKRHKEQQHFQPLNSAVCALC 407
>AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc
finger domain-Z2 isoform protein.
Length = 71
Score = 23.0 bits (47), Expect = 2.6
Identities = 11/44 (25%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
Frame = +2
Query: 374 KQPYCCKECGXXXXXXXSHLQHIEMNHSTLPNSVACTKC-KVRC 502
K+ + C+ CG S +H+ H+ C C +V C
Sbjct: 3 KKLFTCQLCGKVLCSKASLKRHVADKHAERQEEYRCVICERVYC 46
>U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive
opsin protein.
Length = 377
Score = 22.6 bits (46), Expect = 3.5
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = -1
Query: 264 LISVVDLCCLTWVF 223
++S+V CC+ W+F
Sbjct: 69 IMSLVGNCCVIWIF 82
>L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein
protein.
Length = 81
Score = 22.6 bits (46), Expect = 3.5
Identities = 11/38 (28%), Positives = 16/38 (42%)
Frame = +1
Query: 472 CCLHKM*STVSK*TVLKEHIETIHERALYVCPECNKEF 585
C H S+ +L+ HI T + C CN+ F
Sbjct: 43 CKCHLCGKAFSRPWLLQGHIRTHTGEKPFSCQHCNRAF 80
>AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin
protein.
Length = 377
Score = 22.6 bits (46), Expect = 3.5
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = -1
Query: 264 LISVVDLCCLTWVF 223
++S+V CC+ W+F
Sbjct: 69 IMSLVGNCCVIWIF 82
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 21.4 bits (43), Expect = 8.1
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +3
Query: 594 ISCNSSYDTKWLSWSSV 644
I SS+ T WL W++V
Sbjct: 313 ILVTSSFITFWLEWNAV 329
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 21.4 bits (43), Expect = 8.1
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +3
Query: 594 ISCNSSYDTKWLSWSSV 644
I SS+ T WL W++V
Sbjct: 282 ILVTSSFITFWLEWNAV 298
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 21.4 bits (43), Expect = 8.1
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +3
Query: 594 ISCNSSYDTKWLSWSSV 644
I SS+ T WL W++V
Sbjct: 333 ILVTSSFITFWLEWNAV 349
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 21.4 bits (43), Expect = 8.1
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +3
Query: 594 ISCNSSYDTKWLSWSSV 644
I SS+ T WL W++V
Sbjct: 282 ILVTSSFITFWLEWNAV 298
>DQ069332-1|AAZ32217.1| 296|Apis mellifera RNA polymerase II large
subunit protein.
Length = 296
Score = 21.4 bits (43), Expect = 8.1
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +3
Query: 405 RNLSSKRVIFST*K*TTPHYL 467
+N+ KR+ F K T PH++
Sbjct: 252 QNVEGKRIPFGFRKRTLPHFI 272
>AY526236-1|AAS20469.1| 85|Apis mellifera epoxide hydrolase
protein.
Length = 85
Score = 21.4 bits (43), Expect = 8.1
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -3
Query: 355 TDFHVTLPFVLVTGLFTYCTNINLSRINFLF 263
+D V P ++ CT++NLS + +LF
Sbjct: 11 SDMAVLFPEKIIGLHNNMCTSLNLSNLFWLF 41
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 21.4 bits (43), Expect = 8.1
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -2
Query: 542 CIVSMCSFRTVYLDTVL 492
C+V CS TVY+ +V+
Sbjct: 154 CVVLACSTATVYVMSVV 170
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,035
Number of Sequences: 438
Number of extensions: 4109
Number of successful extensions: 25
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20343105
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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