Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021761
(763 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef... 161 7e-41
SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef... 161 1e-40
SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef... 161 1e-40
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 97 2e-21
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 94 2e-20
SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E... 73 4e-14
SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma su... 37 0.003
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 36 0.008
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 36 0.008
SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces p... 35 0.015
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 34 0.019
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 33 0.034
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 31 0.18
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 31 0.24
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 30 0.41
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 29 0.55
SPAC1952.11c |ure2||urease |Schizosaccharomyces pombe|chr 1|||Ma... 28 1.3
SPBC24C6.08c |||vesicle coat protein|Schizosaccharomyces pombe|c... 27 2.9
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 27 3.9
SPAC22F8.08 |||COPII vesicle coat protein |Schizosaccharomyces p... 26 5.1
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 26 5.1
SPAC4D7.09 |tif223||translation initiation factor eIF2B|Schizosa... 26 5.1
SPAC3G6.04 |rnp24||RNA-binding protein Rnp24|Schizosaccharomyces... 26 6.7
SPCC364.02c |bis1||stress response protein Bis1|Schizosaccharomy... 26 6.7
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 26 6.7
SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces pomb... 25 8.9
SPBC11B10.05c |rsp1||random septum position protein Rsp1|Schizos... 25 8.9
>SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha
Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual
Length = 460
Score = 161 bits (392), Expect = 7e-41
Identities = 75/85 (88%), Positives = 80/85 (94%)
Frame = +1
Query: 256 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 435
IDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCAVLI+ GTGEFEAGISK+GQ
Sbjct: 73 IDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAVLIIGGGTGEFEAGISKDGQ 132
Query: 436 TREHALLAFTLGVKQLIVGVNKMDS 510
TREHALLA+TLGVKQLIV VNKMD+
Sbjct: 133 TREHALLAYTLGVKQLIVAVNKMDT 157
Score = 143 bits (346), Expect = 3e-35
Identities = 65/69 (94%), Positives = 67/69 (97%)
Frame = +2
Query: 41 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 220
MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 221 DKLKAERER 247
DKLKAERER
Sbjct: 61 DKLKAERER 69
Score = 119 bits (286), Expect = 5e-28
Identities = 49/80 (61%), Positives = 64/80 (80%)
Frame = +3
Query: 522 YSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEG 701
+S+ RFEEI KE S++IKK+G+NP V FVP+SG+ GDNM+EP+T MPW++GWQ E K G
Sbjct: 160 WSQARFEEIVKETSNFIKKVGFNPKTVPFVPVSGFQGDNMIEPTTNMPWYQGWQKETKAG 219
Query: 702 KADGKCLIEALDAILPPARP 761
GK L+EA+D+I PPARP
Sbjct: 220 VVKGKTLLEAIDSIEPPARP 239
>SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha
Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual
Length = 460
Score = 161 bits (391), Expect = 1e-40
Identities = 74/85 (87%), Positives = 80/85 (94%)
Frame = +1
Query: 256 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 435
IDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCA+LI+ GTGEFEAGISK+GQ
Sbjct: 73 IDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGEFEAGISKDGQ 132
Query: 436 TREHALLAFTLGVKQLIVGVNKMDS 510
TREHALLA+TLGVKQLIV VNKMD+
Sbjct: 133 TREHALLAYTLGVKQLIVAVNKMDT 157
Score = 143 bits (346), Expect = 3e-35
Identities = 65/69 (94%), Positives = 67/69 (97%)
Frame = +2
Query: 41 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 220
MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 221 DKLKAERER 247
DKLKAERER
Sbjct: 61 DKLKAERER 69
Score = 119 bits (286), Expect = 5e-28
Identities = 49/80 (61%), Positives = 64/80 (80%)
Frame = +3
Query: 522 YSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEG 701
+S+ RFEEI KE S++IKK+G+NP V FVP+SG+ GDNM+EP+T MPW++GWQ E K G
Sbjct: 160 WSQARFEEIVKETSNFIKKVGFNPKTVPFVPVSGFQGDNMIEPTTNMPWYQGWQKETKAG 219
Query: 702 KADGKCLIEALDAILPPARP 761
GK L+EA+D+I PPARP
Sbjct: 220 VVKGKTLLEAIDSIEPPARP 239
>SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha
Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual
Length = 460
Score = 161 bits (391), Expect = 1e-40
Identities = 74/85 (87%), Positives = 80/85 (94%)
Frame = +1
Query: 256 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 435
IDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCA+LI+ GTGEFEAGISK+GQ
Sbjct: 73 IDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGEFEAGISKDGQ 132
Query: 436 TREHALLAFTLGVKQLIVGVNKMDS 510
TREHALLA+TLGVKQLIV VNKMD+
Sbjct: 133 TREHALLAYTLGVKQLIVAVNKMDT 157
Score = 143 bits (346), Expect = 3e-35
Identities = 65/69 (94%), Positives = 67/69 (97%)
Frame = +2
Query: 41 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 220
MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 221 DKLKAERER 247
DKLKAERER
Sbjct: 61 DKLKAERER 69
Score = 119 bits (286), Expect = 5e-28
Identities = 49/80 (61%), Positives = 64/80 (80%)
Frame = +3
Query: 522 YSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEG 701
+S+ RFEEI KE S++IKK+G+NP V FVP+SG+ GDNM+EP+T MPW++GWQ E K G
Sbjct: 160 WSQARFEEIVKETSNFIKKVGFNPKTVPFVPVSGFQGDNMIEPTTNMPWYQGWQKETKAG 219
Query: 702 KADGKCLIEALDAILPPARP 761
GK L+EA+D+I PPARP
Sbjct: 220 VVKGKTLLEAIDSIEPPARP 239
>SPCC584.04 |sup35|erf3|translation release factor eRF3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 97.1 bits (231), Expect = 2e-21
Identities = 42/84 (50%), Positives = 59/84 (70%)
Frame = +1
Query: 256 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 435
+++ FET +++DAPGH+ ++ NMI G SQAD VL+++A GEFEAG + GQ
Sbjct: 304 VEVGRAYFETEHRRFSLLDAPGHKGYVTNMINGASQADIGVLVISARRGEFEAGFERGGQ 363
Query: 436 TREHALLAFTLGVKQLIVGVNKMD 507
TREHA+LA T G+ L+V +NKMD
Sbjct: 364 TREHAVLARTQGINHLVVVINKMD 387
Score = 81.4 bits (192), Expect = 1e-16
Identities = 35/65 (53%), Positives = 48/65 (73%)
Frame = +2
Query: 53 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 232
K H+NIV IGHVD+GKST G++++ G +DKRT+EK E+EA+E GK S+ +W LD
Sbjct: 236 KEHVNIVFIGHVDAGKSTLGGNILFLTGMVDKRTMEKIEREAKEAGKESWYLSWALDSTS 295
Query: 233 AERER 247
ERE+
Sbjct: 296 EEREK 300
>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 93.9 bits (223), Expect = 2e-20
Identities = 44/87 (50%), Positives = 57/87 (65%)
Frame = +1
Query: 256 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 435
+D+A FE+ K I DAPGHRDFI MI G S AD AVL+V + FE G +NGQ
Sbjct: 243 MDVASTTFESDKKIYEIGDAPGHRDFISGMIAGASSADFAVLVVDSSQNNFERGFLENGQ 302
Query: 436 TREHALLAFTLGVKQLIVGVNKMDSLN 516
TREHA L LG+ +++V VNK+D ++
Sbjct: 303 TREHAYLLRALGISEIVVSVNKLDLMS 329
Score = 74.1 bits (174), Expect = 2e-14
Identities = 32/65 (49%), Positives = 45/65 (69%)
Frame = +2
Query: 53 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 232
K +++VV GHVDSGKST G ++++ G I+ R+++K EA GKGSF YAW+LD +
Sbjct: 175 KPVVHLVVTGHVDSGKSTMLGRIMFELGEINSRSMQKLHNEAANSGKGSFSYAWLLDTTE 234
Query: 233 AERER 247
ER R
Sbjct: 235 EERAR 239
Score = 48.8 bits (111), Expect = 8e-07
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Frame = +3
Query: 522 YSEPRFEEIKKEVSSY-IKKIGYNPAAVAFVPISGWHGDNML--EPSTKMPWFKGWQVER 692
+SE RF+EIK VS + IK +G+ + V FVPIS G N++ + S W+K
Sbjct: 330 WSEDRFQEIKNIVSDFLIKMVGFKTSNVHFVPISAISGTNLIQKDSSDLYKWYK------ 383
Query: 693 KEGKADGKCLIEALDAILPPARP 761
G L+ ALD ++PP +P
Sbjct: 384 ------GPTLLSALDQLVPPEKP 400
>SPBC9B6.04c |tuf1||mitochondrial translation elongation factor
EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 72.9 bits (171), Expect = 4e-14
Identities = 35/78 (44%), Positives = 52/78 (66%)
Frame = +1
Query: 274 KFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHAL 453
++ET+ + +D PGH D+IKNMITG + D A+++V+A G+ QTREH L
Sbjct: 110 EYETANRHYAHVDCPGHADYIKNMITGAATMDGAIIVVSATDGQMP-------QTREHLL 162
Query: 454 LAFTLGVKQLIVGVNKMD 507
LA +GVKQ++V +NK+D
Sbjct: 163 LARQVGVKQIVVYINKVD 180
Score = 35.1 bits (77), Expect = 0.011
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +2
Query: 47 KEKTHINIVVIGHVDSGKSTTTGHLIYKC 133
++K H+NI IGHVD GK+T T I KC
Sbjct: 49 RKKPHVNIGTIGHVDHGKTTLTA-AITKC 76
>SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 446
Score = 37.1 bits (82), Expect = 0.003
Identities = 20/71 (28%), Positives = 34/71 (47%)
Frame = +1
Query: 295 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 474
+V+ +D PGH + M+ G + D A+L++A QT EH + +
Sbjct: 109 HVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNES------CPQPQTSEHLAAIEIMQL 162
Query: 475 KQLIVGVNKMD 507
K +I+ NK+D
Sbjct: 163 KHIIILQNKVD 173
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 35.5 bits (78), Expect = 0.008
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +2
Query: 41 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 136
MGK N+ VI HVD GKST T L+ K G
Sbjct: 13 MGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAG 44
Score = 27.9 bits (59), Expect = 1.7
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 292 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 387
+ V +ID+PGH DF + D A+++V
Sbjct: 98 FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 35.5 bits (78), Expect = 0.008
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +2
Query: 41 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 136
MGK N+ VI HVD GKST T L+ K G
Sbjct: 13 MGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAG 44
Score = 27.9 bits (59), Expect = 1.7
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 292 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 387
+ V +ID+PGH DF + D A+++V
Sbjct: 98 FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129
>SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 704
Score = 34.7 bits (76), Expect = 0.015
Identities = 26/105 (24%), Positives = 47/105 (44%), Gaps = 4/105 (3%)
Frame = -2
Query: 432 TVLRDTSFEFTGTGSYDEHSAISLRGSCDHVLDEISVSRSINDGNIVLASFELPESNI-- 259
+V+ +T T ++ + +SL SC L + S + + S + SN
Sbjct: 109 SVMNETDSSSTSVEDVNKENILSLNDSCLIKLSDDEASNKSSRSSTPRNSIKSNSSNQGH 168
Query: 258 -DL-IPRSRSAFSLSNTQAYLKDPLPISWASFSNFSMVRLSIPPH 130
D+ IP+ A S+ N++ + +D LP + S V+L +P H
Sbjct: 169 GDIPIPKKNPARSVCNSKLFNEDTLPAEFEEVSISPPVKLELPTH 213
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 34.3 bits (75), Expect = 0.019
Identities = 21/57 (36%), Positives = 29/57 (50%)
Frame = +1
Query: 277 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 447
FE S Y + IID PGH DF + D AVL++ A +G I+ + Q R +
Sbjct: 141 FEKS-YNINIIDTPGHIDFTIEVERALRVLDGAVLVLCAVSGVQSQTITVDRQMRRY 196
Score = 29.1 bits (62), Expect = 0.72
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 65 NIVVIGHVDSGKSTTTGHLIYKCGGI 142
NI + H+DSGK+T T ++Y G I
Sbjct: 61 NIGISAHIDSGKTTFTERVLYYTGRI 86
>SPBC1271.15c |||translation initiation factor
IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
Length = 686
Score = 33.5 bits (73), Expect = 0.034
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +1
Query: 277 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 402
F+ ++T +D PGH F G + AD VL+VA G
Sbjct: 215 FDKGSKFITFLDTPGHMAFEAMRKRGANIADIVVLVVAGDDG 256
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 31.1 bits (67), Expect = 0.18
Identities = 23/74 (31%), Positives = 37/74 (50%)
Frame = +1
Query: 292 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLG 471
Y + +ID+PGH DF + + + D A ++V A G I+ Q A+
Sbjct: 94 YLINLIDSPGHVDFSSEVSSASRLCDGAFVLVDAVEGVCSQTITVLRQ-------AWIDR 146
Query: 472 VKQLIVGVNKMDSL 513
+K ++V +NKMD L
Sbjct: 147 IKVILV-INKMDRL 159
>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 646
Score = 30.7 bits (66), Expect = 0.24
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +1
Query: 268 LWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 402
++ + Y + +ID PGH DF ++ + + +L+V A G
Sbjct: 116 IYYYHGQSYLLNLIDTPGHVDFRAEVMHSLAACEGCILLVDASQG 160
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 29.9 bits (64), Expect = 0.41
Identities = 26/84 (30%), Positives = 38/84 (45%)
Frame = +1
Query: 256 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 435
I+ A F + +ID PGH DF + + D AV I+ + AG+ Q
Sbjct: 81 INSAAISFTWRNQRINLIDTPGHADFTFEVERSVAVLDGAVAII-----DGSAGV--EAQ 133
Query: 436 TREHALLAFTLGVKQLIVGVNKMD 507
T+ A G+ ++I VNKMD
Sbjct: 134 TKVVWKQATKRGIPKVIF-VNKMD 156
Score = 28.7 bits (61), Expect = 0.96
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +2
Query: 65 NIVVIGHVDSGKSTTTGHLIYKCG 136
N+ +I H+D+GK+T T ++Y G
Sbjct: 30 NVGIIAHIDAGKTTLTEKMLYYGG 53
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 29.5 bits (63), Expect = 0.55
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 304 IIDAPGHRDFIKNMITGTSQADCAVLIV 387
IID PGH F GTS + A+L++
Sbjct: 553 IIDTPGHESFTNLRSRGTSLCNIAILVI 580
>SPAC1952.11c |ure2||urease |Schizosaccharomyces pombe|chr
1|||Manual
Length = 835
Score = 28.3 bits (60), Expect = 1.3
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = -1
Query: 760 GRAGGRMASRASMRHFPSALPSLRSTCHPLNQGILVEGSNMLSPCH 623
G GG S+ P+ LPS + P L E +ML CH
Sbjct: 545 GAGGGHAPDIISLVQNPNILPSSTNPTRPFTTNTLDEELDMLMVCH 590
>SPBC24C6.08c |||vesicle coat protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 367
Score = 27.1 bits (57), Expect = 2.9
Identities = 15/63 (23%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = +1
Query: 523 TVSPDLRKSRRKYPHTSRRLATTQLL---SLSCPFLDGTETTCWSLQPKCLGSRDGRWSV 693
+ +PD+ ++PHT +R +T + L LSC + +E + P G +D + +
Sbjct: 145 STNPDVLYMSSQHPHTQQRYSTLKRLMVRCLSCEYSTLSEASDSMSNPLFFGDQDNGYVI 204
Query: 694 RKA 702
++
Sbjct: 205 SQS 207
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 26.6 bits (56), Expect = 3.9
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 307 IDAPGHRDFIKNMITGTSQADCAVLIV 387
ID PGH DF+ + + +D VL+V
Sbjct: 214 IDTPGHVDFVDEVAAPMAISDGVVLVV 240
>SPAC22F8.08 |||COPII vesicle coat protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 926
Score = 26.2 bits (55), Expect = 5.1
Identities = 26/79 (32%), Positives = 36/79 (45%)
Frame = +1
Query: 385 VAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSLNHHTVSPDLRKSRRKYP 564
VA GT E GI NG E+A+ A +I V++ ++H + KSRR+YP
Sbjct: 47 VAEGTAE---GIVSNG---EYAVGAMGAAPTNIIGSVDQQPPVSHTS-----HKSRRQYP 95
Query: 565 HTSRRLATTQLLSLSCPFL 621
L T S + P L
Sbjct: 96 AEVFELTNTLAASPAPPSL 114
>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 380
Score = 26.2 bits (55), Expect = 5.1
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = +1
Query: 253 QIDIALWKFETSKYYV--TIIDAPGHRDFIKN 342
+I+I + E +++ T+ID PG DFI N
Sbjct: 72 EIEITKAELEEKNFHLRLTVIDTPGFGDFINN 103
>SPAC4D7.09 |tif223||translation initiation factor
eIF2B|Schizosaccharomyces pombe|chr 1|||Manual
Length = 468
Score = 26.2 bits (55), Expect = 5.1
Identities = 22/66 (33%), Positives = 30/66 (45%)
Frame = -2
Query: 381 EHSAISLRGSCDHVLDEISVSRSINDGNIVLASFELPESNIDLIPRSRSAFSLSNTQAYL 202
EH+A+ L S +L IS R N GNI L S + + S + L+ + A
Sbjct: 5 EHAALPLASS-PSILGPISGGR--NRGNIQLQSIPIEFQAVVFAGFGNSLYPLTGSDALP 61
Query: 201 KDPLPI 184
K LPI
Sbjct: 62 KALLPI 67
>SPAC3G6.04 |rnp24||RNA-binding protein Rnp24|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 369
Score = 25.8 bits (54), Expect = 6.7
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
Frame = +1
Query: 493 VNKMDSLNHHTVSPDLRKSRRKYPHTSRRLATTQLLSLSCPF-LDGTETTCWSLQPKCLG 669
+ KMDSLN+ PD K R+K H S + ++L + + ++ L+
Sbjct: 4 IQKMDSLNNKEGQPD--KKRKK--HESEKEGENEVLEIDVTKPVPPSKKLMRKLRKAGKI 59
Query: 670 SRDGRW---SVRKAKLTENASLK 729
+DG W ++ +AK E LK
Sbjct: 60 DKDGNWTPEALEEAKKKEEKRLK 82
>SPCC364.02c |bis1||stress response protein Bis1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 384
Score = 25.8 bits (54), Expect = 6.7
Identities = 17/60 (28%), Positives = 27/60 (45%)
Frame = -2
Query: 315 SINDGNIVLASFELPESNIDLIPRSRSAFSLSNTQAYLKDPLPISWASFSNFSMVRLSIP 136
S++ + L S+ P S + A ++YL+ PL S S S + +R SIP
Sbjct: 305 SVDSASTALNSYSTPNSVSRKLTNLTPAARRLVARSYLRSPLHGSSPSASRHTALRTSIP 364
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 25.8 bits (54), Expect = 6.7
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -3
Query: 248 HAHAQPLVCPIPKHI*RILYPFPGPPSRTSRWY 150
H+H PL P+P +L P P P S WY
Sbjct: 135 HSHHPPLHNPLPVSCQPVLRP-PPVPQVPSHWY 166
>SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 662
Score = 25.4 bits (53), Expect = 8.9
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = -3
Query: 227 VCPIPKHI*RILYPFPGPPSRTSRWYVCQYHHICRSSDQWWWT 99
V +PK I I++ F P S S C+Y S D W T
Sbjct: 31 VLNLPKEILIIIFSFLDPRSLLSAQCTCKYWKKLLSDDLSWRT 73
>SPBC11B10.05c |rsp1||random septum position protein
Rsp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 494
Score = 25.4 bits (53), Expect = 8.9
Identities = 18/65 (27%), Positives = 29/65 (44%)
Frame = +3
Query: 483 HRRSKQNGFTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKM 662
HR +G E S F+E+ SYI +P +G+ +N+++P +
Sbjct: 143 HRSFSASGKMEKNNS---FKEVSTS-KSYISSGYLHPKTSPIFKKNGYATENVVDPISSS 198
Query: 663 PWFKG 677
P FKG
Sbjct: 199 PRFKG 203
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,234,519
Number of Sequences: 5004
Number of extensions: 68770
Number of successful extensions: 272
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 242
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 268
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 365309308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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