Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021760
         (653 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    26   0.24 
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    24   0.95 
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    21   6.7  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.9  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    21   8.9  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 26.2 bits (55), Expect = 0.24
 Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
 Frame = -2

Query: 271 VHLLFVLCENASSCLRFVALLPEFILKFSVINPEHWQ-LFSQFSLLSPHIL 122
           +HLLF+LC     C   + L   +  +  +I P H+   FS + L S   L
Sbjct: 277 MHLLFLLCIYYFYCALIILLCIYYFCRAFIIFPTHFYCAFSLYPLKSTFYL 327


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 24.2 bits (50), Expect = 0.95
 Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 6/71 (8%)
 Frame = +2

Query: 290 DQSPGPSKRRILSDIQNSILSSPINYKPTSPLIERLKSPETRNSPLKTM-TN---SPKSQ 457
           DQ   PS R   +  +N   S+P    PT P   +LK+   +  P   + TN   S K Q
Sbjct: 415 DQRSTPSPRVYGNVNENQDCSTPTENSPTKPYY-KLKTANNKRPPSTELGTNIYTSSKRQ 473

Query: 458 RLT--LTPKTS 484
           R +  L+P +S
Sbjct: 474 RTSPQLSPMSS 484


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 6/14 (42%), Positives = 8/14 (57%)
 Frame = -3

Query: 297 LWSKLSEWGYIFFL 256
           LW K+  W Y+  L
Sbjct: 38  LWQKIQAWTYLILL 51


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +1

Query: 490  NTKNQTSPVTPKVRSPLSYEIAENIL 567
            N K +  P T K  + + YE  E +L
Sbjct: 2205 NDKTKPKPTTMKPTTTIGYEPQEPVL 2230


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 12/56 (21%), Positives = 25/56 (44%)
 Frame = +2

Query: 338 NSILSSPINYKPTSPLIERLKSPETRNSPLKTMTNSPKSQRLTLTPKTSQETPKIR 505
           +S  S  +   P +P+I+  K P   ++ L    ++  S    +    + ET K++
Sbjct: 66  SSTSSGSLGQFPATPVIDPAKDPAIYSNLLPRPGSNDNSWESLIEVTKTSETSKLQ 121


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,814
Number of Sequences: 336
Number of extensions: 3449
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)