Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021760
(653 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_11110| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.15
SB_6095| Best HMM Match : 7tm_1 (HMM E-Value=0.013) 33 0.15
SB_26471| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.27
SB_39471| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.62
SB_5179| Best HMM Match : Neur_chan_memb (HMM E-Value=3.5e-08) 31 0.62
SB_41024| Best HMM Match : DIL (HMM E-Value=1.3e-30) 31 1.1
SB_47342| Best HMM Match : VWA (HMM E-Value=0) 30 1.4
SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_56393| Best HMM Match : CTF_NFI (HMM E-Value=0.75) 30 1.9
SB_54687| Best HMM Match : Trp_Tyr_perm (HMM E-Value=2.2) 30 1.9
SB_48991| Best HMM Match : Rad52_Rad22 (HMM E-Value=5.2e-12) 30 1.9
SB_3503| Best HMM Match : Rad52_Rad22 (HMM E-Value=1e-24) 30 1.9
SB_56694| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_44656| Best HMM Match : 7tm_1 (HMM E-Value=0) 29 2.5
SB_10606| Best HMM Match : I-set (HMM E-Value=0) 29 2.5
SB_25220| Best HMM Match : Ank (HMM E-Value=6.2e-11) 29 3.3
SB_8676| Best HMM Match : Peptidase_M18 (HMM E-Value=0) 29 3.3
SB_47598| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_10587| Best HMM Match : DGCR6 (HMM E-Value=8.6e-07) 29 3.3
SB_50209| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_441| Best HMM Match : zf-C2H2 (HMM E-Value=5.5) 29 4.4
SB_43395| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_18529| Best HMM Match : DUF1388 (HMM E-Value=3.5) 29 4.4
SB_5549| Best HMM Match : PT (HMM E-Value=1.9) 29 4.4
SB_39472| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_58772| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_35345| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_20760| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_42335| Best HMM Match : Hint (HMM E-Value=1.4013e-45) 28 7.6
SB_22927| Best HMM Match : SerH (HMM E-Value=1.1) 28 7.6
SB_5192| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_56456| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_54211| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_51982| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_47576| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_41443| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_38979| Best HMM Match : I-set (HMM E-Value=0.11) 28 7.6
SB_34828| Best HMM Match : W2 (HMM E-Value=6.9) 28 7.6
SB_25665| Best HMM Match : TolA (HMM E-Value=1.7) 28 7.6
SB_24123| Best HMM Match : RCSD (HMM E-Value=3.8) 28 7.6
SB_11786| Best HMM Match : Complex1_LYR (HMM E-Value=5.6) 28 7.6
SB_9381| Best HMM Match : TAF4 (HMM E-Value=2.9) 28 7.6
>SB_11110| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 862
Score = 33.5 bits (73), Expect = 0.15
Identities = 25/72 (34%), Positives = 36/72 (50%)
Frame = +2
Query: 305 PSKRRILSDIQNSILSSPINYKPTSPLIERLKSPETRNSPLKTMTNSPKSQRLTLTPKTS 484
PS I+ D S SSP N + SP++ RL E+R+S L+ ++ SP RL L +
Sbjct: 50 PSDDCIIFDDSFSSCSSPENKQLYSPVVARLLD-ESRSSELEELSYSPVVARL-LDESSE 107
Query: 485 QETPKIRHRQSH 520
E +Q H
Sbjct: 108 SEIETTPQKQQH 119
>SB_6095| Best HMM Match : 7tm_1 (HMM E-Value=0.013)
Length = 872
Score = 33.5 bits (73), Expect = 0.15
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = -3
Query: 297 LWSKLSEWGYIFFLC--CARMLLPVYVLLRCYR 205
LW+K S WGYI C A +LLP+ V +CY+
Sbjct: 273 LWTKSSSWGYIALACKKDACVLLPLAVQGQCYQ 305
>SB_26471| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 566
Score = 32.7 bits (71), Expect = 0.27
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 4/90 (4%)
Frame = -3
Query: 531 SYFGCDWRCLIFGVSCEVFGVRVNLWDFGEFVMVFRGEF--LVSGDFNLSIRGEVGL*LI 358
S+F ++ +G F ++ W +GEF F GE +SG+ + GE+ L
Sbjct: 404 SWFYGEFSSWFYGEISSWFYGELSFWFYGEFSSWFYGELSSSLSGELSSWFYGELSSWLY 463
Query: 357 GELSIEFC--MSERILRFEGPGLWSKLSEW 274
GELS F +S + L+ +LS W
Sbjct: 464 GELSSWFYGELSSSLSGELSSWLYGELSSW 493
Score = 31.5 bits (68), Expect = 0.62
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = -3
Query: 531 SYFGCDWRCLIFGVSCEVFGVRVNLWDFGEFVMVFRGEF--LVSGDFNLSIRGEVGL*LI 358
S+F ++ +G F ++ W +GEF F GE +SG+ + + GE+ L
Sbjct: 158 SWFYGEFSSWFYGEISSWFYGELSFWFYGEFSSWFYGELSSSLSGELSSWLYGELSSWLY 217
Query: 357 GELSIEF 337
GELS F
Sbjct: 218 GELSSWF 224
Score = 29.9 bits (64), Expect = 1.9
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = -3
Query: 531 SYFGCDWRCLIFGVSCEVFGVRVNLWDFGEFVMVFRGEF--LVSGDFNLSIRGEVGL*LI 358
S+F ++ +G F ++ W +GEF F GE +SG+ + + GE+
Sbjct: 62 SWFYGEFSSWFYGEISSWFYGELSFWFYGEFSSWFYGELSSSLSGELSSWLYGELSSWFY 121
Query: 357 GELSIEF 337
GELS F
Sbjct: 122 GELSSWF 128
>SB_39471| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 167
Score = 31.5 bits (68), Expect = 0.62
Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = +2
Query: 293 QSPGPSKRRILSDIQNSILSSPINYKPTSPLIERLKSP--ETRNSPLKTMTNSPKSQR 460
Q+ P ++ + I N ++PIN + +P+I++ +P E N+PL N+P Q+
Sbjct: 12 QANNPINQQASNPI-NQQANNPINQQANNPMIQQANNPLTEQANNPLTQEANNPTGQQ 68
>SB_5179| Best HMM Match : Neur_chan_memb (HMM E-Value=3.5e-08)
Length = 428
Score = 31.5 bits (68), Expect = 0.62
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = -3
Query: 294 WSKLSEWGYI--FFLCCARMLLPVYVLLRCYRNLS*SFLLLIRNTGNYFRNFHYSLPTFW 121
W +SE + FF+C M++ VLLR Y+ + S L+ N YF YS+
Sbjct: 343 WQSVSERLDVIFFFICAITMIVTYSVLLRGYKYMELSLDKLVYNLVYYFGATKYSVTEIM 402
Query: 120 HNVLILI 100
VL I
Sbjct: 403 KIVLCSI 409
>SB_41024| Best HMM Match : DIL (HMM E-Value=1.3e-30)
Length = 1440
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/77 (24%), Positives = 34/77 (44%)
Frame = +2
Query: 269 YPHSLSFDQSPGPSKRRILSDIQNSILSSPINYKPTSPLIERLKSPETRNSPLKTMTNSP 448
Y S + +SP + R + +N++ SSP++ + T SP SP + SP
Sbjct: 181 YDRSPNNSESPPINTARQIETYRNNVSSSPVSVRSTESEHSNKASPRFAISPSRDSPTSP 240
Query: 449 KSQRLTLTPKTSQETPK 499
+ + S+ TP+
Sbjct: 241 PLRPGSSGSDKSRSTPR 257
>SB_47342| Best HMM Match : VWA (HMM E-Value=0)
Length = 483
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +2
Query: 353 SPINYKPTSPLIERLKSPETRNSPLKTMTNSPKSQRLTLTPKTSQETPK 499
+PI PT + R SP T P+ T+ S + RL+ TP T ++T +
Sbjct: 233 APIQPSPTDSQVTRENSPSTTRRPITTIPTS-RPTRLS-TPSTRRKTTR 279
>SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1870
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +2
Query: 299 PGPSKRRILSDIQ-NSILSSPINYKPTSPLIERLKSPETRNSPLKTMTNSPKSQRLTLTP 475
P S R ++D+ N++ S P+ YK P+ KSP P+ ++ +PKS TP
Sbjct: 369 PIVSHRMRITDVAFNAVSSKPV-YKAFRPV----KSPGREQKPVISLMPTPKSVTTGTTP 423
Query: 476 KTSQE 490
T+ E
Sbjct: 424 ATTSE 428
>SB_56393| Best HMM Match : CTF_NFI (HMM E-Value=0.75)
Length = 886
Score = 29.9 bits (64), Expect = 1.9
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Frame = +2
Query: 239 SILAQHKKKMYPHSLSFDQSP--GPSKRRIL-SDIQNSILSSPINYKPTSPLIERLKSPE 409
S +A+ K P S+ FD+S GP + L S + S S P+ K PL++ KSP
Sbjct: 96 STIAKDKDSFLPPSI-FDESESKGPEVAKTLASRVNGSFTSKPLEGK-LKPLMDNYKSPV 153
Query: 410 TRNSPLKTMTNSPKSQ 457
M N+ K++
Sbjct: 154 NCEMFYDDMINAKKNK 169
>SB_54687| Best HMM Match : Trp_Tyr_perm (HMM E-Value=2.2)
Length = 369
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +3
Query: 12 SQLSSYHLYWLIIEQFWIAMIMD**FXCFKLELKRCAKMWGESSENC 152
S++ H Y+L++E ++I D C +E+ CA+MWG NC
Sbjct: 178 SKVLQIHTYFLLLE----SVIHDVPMSCLAIEM--CAQMWGIGGINC 218
>SB_48991| Best HMM Match : Rad52_Rad22 (HMM E-Value=5.2e-12)
Length = 353
Score = 29.9 bits (64), Expect = 1.9
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 8/100 (8%)
Frame = +2
Query: 233 GRSILAQHKKKMYPHSLSFDQSPGPS----KRRILSDIQNSILSSPINYKPTSPLIERLK 400
GR+ L H + P S Q+P S K R D N ++PIN T+ ++
Sbjct: 105 GRAKLTLHH--VAPSSEHKIQAPTASVTTEKSRTSEDSSNRNCTTPINQSTTTVTVKNET 162
Query: 401 SPETRNS--PLKT--MTNSPKSQRLTLTPKTSQETPKIRH 508
S + +NS P+KT ++P + L ++ TP++ H
Sbjct: 163 SSDRKNSNQPIKTPCAESTPIALENRLVKTSAVTTPQVSH 202
>SB_3503| Best HMM Match : Rad52_Rad22 (HMM E-Value=1e-24)
Length = 398
Score = 29.9 bits (64), Expect = 1.9
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 8/100 (8%)
Frame = +2
Query: 233 GRSILAQHKKKMYPHSLSFDQSPGPS----KRRILSDIQNSILSSPINYKPTSPLIERLK 400
GR+ L H + P S Q+P S K R D N ++PIN T+ ++
Sbjct: 150 GRAKLTLHH--VAPSSEHKIQAPTASVTTEKSRTSEDSSNRNCTTPINQSTTTVTVKNET 207
Query: 401 SPETRNS--PLKT--MTNSPKSQRLTLTPKTSQETPKIRH 508
S + +NS P+KT ++P + L ++ TP++ H
Sbjct: 208 SSDRKNSNQPIKTPCAESTPIALENRLVKTSAVTTPQVSH 247
>SB_56694| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 409
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = -3
Query: 330 SERILRFEGPGLWSKLS-EWGYIFFLCCARMLLPVYVLLRCYRNL 199
S R + F P S+ +GY FF+ A +P+ V++ CY +
Sbjct: 153 SSRAISFAIPSRESRAQFSFGYTFFVATASFFVPLPVMIYCYTRI 197
>SB_44656| Best HMM Match : 7tm_1 (HMM E-Value=0)
Length = 409
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = -3
Query: 330 SERILRFEGPGLWSKLS-EWGYIFFLCCARMLLPVYVLLRCYRNL 199
S R + F P S+ +GY FF+ A +P+ V++ CY +
Sbjct: 153 SSRAISFAIPSRESRAQFSFGYTFFVATASFFVPLPVMIYCYTRI 197
>SB_10606| Best HMM Match : I-set (HMM E-Value=0)
Length = 872
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 463 NSHSENFTRNTKNQTSPVTPKVRSP 537
NSH E+ +T N PV PK+ SP
Sbjct: 636 NSHGEDRVSSTLNTMDPVVPKILSP 660
>SB_25220| Best HMM Match : Ank (HMM E-Value=6.2e-11)
Length = 744
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +1
Query: 409 DQKLTSKNHDKLTKIPEINSHSENFTRNTKNQTSPVT 519
++++TS++HD+ T +N HS +N + T+P T
Sbjct: 346 NEEVTSQSHDEQTD--SVNDHSPTANKNNNDDTTPNT 380
>SB_8676| Best HMM Match : Peptidase_M18 (HMM E-Value=0)
Length = 1161
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +1
Query: 379 TSDRKIKVTRDQKLTSKNHDKLTKIPEINSHSENFTRNT 495
T+ ++K RDQK+ S N D + P I S +NT
Sbjct: 114 TAPERMKEERDQKIKSANRDNCLRKPHIYEFSRLTLQNT 152
>SB_47598| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2332
Score = 29.1 bits (62), Expect = 3.3
Identities = 26/99 (26%), Positives = 44/99 (44%), Gaps = 6/99 (6%)
Frame = +2
Query: 245 LAQHKKKMYPHSLSFDQ-SPGPSKRRILSDIQNSILSSPINYKPTS-----PLIERLKSP 406
L++ +K+ SL + SPG + ++ + + + I+ KP S + K P
Sbjct: 1120 LSKVSRKVRKASLKTPRPSPGKLRDDGITRPASRVSAQQISRKPRSNDQPSQATSKTKLP 1179
Query: 407 ETRNSPLKTMTNSPKSQRLTLTPKTSQETPKIRHRQSHP 523
R+ PL + PK Q+ LTP+T H S+P
Sbjct: 1180 ALRSKPLSG--SPPKIQQARLTPRTPSSAFSQNHSTSYP 1216
>SB_10587| Best HMM Match : DGCR6 (HMM E-Value=8.6e-07)
Length = 423
Score = 29.1 bits (62), Expect = 3.3
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +2
Query: 320 ILSDIQNSILSSPINYKPTSPL--IERLKSPETRNSPLKTMTNSPKSQRLTLTPKTSQET 493
+L+D+ S+L + ++ L I++L N +K + NS K QR+ K +E
Sbjct: 80 VLADVATSLLDGTV-FEIVKGLEDIQQLTERNLLNKRMKVI-NSHKVQRMEQAKKHKEEI 137
Query: 494 PKIRHRQSH 520
K +HR H
Sbjct: 138 EKNQHRPHH 146
>SB_50209| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 473
Score = 28.7 bits (61), Expect = 4.4
Identities = 20/72 (27%), Positives = 32/72 (44%)
Frame = +3
Query: 138 SSENCENNCQCSGLITENFRINSGNNATKRKQEEAFSHNTKRRCTPTRLASTKVLAPRSA 317
+S N ENN G +N I + NNA + + +N+K T T+ +T
Sbjct: 372 NSNNTENNSNNDGF--DN-SIRNDNNAGNKSNNKDEKNNSKGTTTTTKTITTTATTTTIT 428
Query: 318 GSSQTYKTLYSA 353
+ T KT+ +A
Sbjct: 429 TAMATTKTITAA 440
>SB_441| Best HMM Match : zf-C2H2 (HMM E-Value=5.5)
Length = 336
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/51 (25%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = +2
Query: 299 PGPSKRRILSDIQNSILSSPINYKPT---SPLIERLKSPETRNSPLKTMTN 442
P S +R+ +++++ + P Y+ +P R+K+P+ N P K + N
Sbjct: 146 PRKSVKRMAQELEDNTIPPPPEYRDRPAPTPRARRIKTPQRVNKPDKALVN 196
>SB_43395| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1112
Score = 28.7 bits (61), Expect = 4.4
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = +1
Query: 211 TTQQNVNRKKHSRTTQKEDVPPLA*LRPKSWPLEAQDPLRHTKLYTQLTN 360
TTQ+ N ++HS T K PP P PLE + L+ +LY N
Sbjct: 600 TTQRQGNMRRHSPTMDKHPFPPQM-QHPNLSPLEMR--LQQVQLYQNSPN 646
>SB_18529| Best HMM Match : DUF1388 (HMM E-Value=3.5)
Length = 435
Score = 28.7 bits (61), Expect = 4.4
Identities = 29/123 (23%), Positives = 49/123 (39%), Gaps = 6/123 (4%)
Frame = +2
Query: 176 INNRKLQDKFR*QRNKT*TGRSILAQHKKKMYPHSLSFDQSPG----PSKRRILSDIQNS 343
+ +RK + K KT T R HK K P P PS++ S +
Sbjct: 1 MTSRKTKTKRPRPSGKTKTSRKTKTSHKTKTKPKRPRQAARPSCKTKPSRKTKTSRKTKT 60
Query: 344 ILSSPINYKP--TSPLIERLKSPETRNSPLKTMTNSPKSQRLTLTPKTSQETPKIRHRQS 517
L + K +S K+ +RN+ T + + + +L KTS+ T R+ ++
Sbjct: 61 SLKTKTKGKTRTSSKTKTSHKTKTSRNTKTSRKTKTSSNTKTSLKTKTSRNTKTSRNTKT 120
Query: 518 HPK 526
P+
Sbjct: 121 KPQ 123
>SB_5549| Best HMM Match : PT (HMM E-Value=1.9)
Length = 282
Score = 28.7 bits (61), Expect = 4.4
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Frame = +2
Query: 311 KRRILSDIQNSILSSPINYKPTSPLIERLKSPETR-----NSPLKTMTNSPKSQRLTLTP 475
K + ++++ S +S TSP R KSP+T + KT + + L +
Sbjct: 6 KTSLKTNLKTSRKTSSKTSLKTSPKTRRKKSPKTTPKTSLKTSRKTSLKTSRKTSLNASR 65
Query: 476 KTSQETPKIRHRQSHPK 526
KTS++T R +++PK
Sbjct: 66 KTSRKTSLKRSLKTNPK 82
>SB_39472| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 177
Score = 28.3 bits (60), Expect = 5.8
Identities = 11/39 (28%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Frame = +2
Query: 350 SSPINYKPTSPLIERLKSPETR--NSPLKTMTNSPKSQR 460
+ PIN + +P+ ++ +P+T+ N+P+ N+P +Q+
Sbjct: 6 NKPINQQANNPINQQANNPKTQQANNPMTQQANNPINQQ 44
>SB_58772| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 104
Score = 28.3 bits (60), Expect = 5.8
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +2
Query: 347 LSSPINYKPTSPLIERLKSPETRNSPLKTMTNSPKSQRLTLTP-KTSQETPKIR 505
+SSP P+SP + ++ ET + P+ T T + ++ ++T KT+Q K R
Sbjct: 4 ISSPEKQTPSSPTVHEYETRET-SEPIVTETETVETTPSSVTKVKTTQTVAKSR 56
>SB_35345| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 172
Score = 28.3 bits (60), Expect = 5.8
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Frame = +2
Query: 239 SILAQHKKKMYPHSLSFDQSP--GPSKRRIL-SDIQNSILSSPINYKPTSPLIERLKSP 406
S +A+ K P S+ FD+S GP + L S + S S P+ K PL++ KSP
Sbjct: 101 STIAKDKDSFLPPSI-FDESESKGPEVAKTLASRVNGSFTSKPLEGK-LKPLMDNYKSP 157
>SB_20760| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 230
Score = 28.3 bits (60), Expect = 5.8
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = +1
Query: 415 KLTSKNHDKLTKIPEINSHSENFTRNTKNQTSPVTPKVRSPLS--YEIAENILDRPSPLT 588
+L K HD +T PE + H N+TR K Q P+ + +P + + D +P T
Sbjct: 69 QLHPKRHDTIT--PETSRH--NYTRYVKTQLHPIRQETITPETSRHNYTPKRHDTITPQT 124
Query: 589 SR 594
SR
Sbjct: 125 SR 126
>SB_42335| Best HMM Match : Hint (HMM E-Value=1.4013e-45)
Length = 825
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/55 (27%), Positives = 25/55 (45%)
Frame = +2
Query: 332 IQNSILSSPINYKPTSPLIERLKSPETRNSPLKTMTNSPKSQRLTLTPKTSQETP 496
+ +S P KPT+ + + P T +PL + + S + TP T + TP
Sbjct: 163 LPSSTPEMPETAKPTTVVTQVTTMPNTSVTPLTSPSTSVTQRTRPTTPVTQEATP 217
>SB_22927| Best HMM Match : SerH (HMM E-Value=1.1)
Length = 678
Score = 27.9 bits (59), Expect = 7.6
Identities = 18/69 (26%), Positives = 34/69 (49%)
Frame = +2
Query: 311 KRRILSDIQNSILSSPINYKPTSPLIERLKSPETRNSPLKTMTNSPKSQRLTLTPKTSQE 490
K ++ + +S+ +S T +I S E + SP+ ++T+S + T PK+S
Sbjct: 526 KAAYITSVTSSVQASHAK-SITQSIISVAASAELQGSPVTSVTHSGDLKYTTSPPKSSIV 584
Query: 491 TPKIRHRQS 517
TP + + S
Sbjct: 585 TPDLSNSPS 593
>SB_5192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4865
Score = 27.9 bits (59), Expect = 7.6
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +2
Query: 290 DQSPGPSKRRILSDIQNSILSSPINYKPTSPLIERLKSP 406
DQSP P + R+ S ++S SS +P SP+ R SP
Sbjct: 1922 DQSPRPGRSRVNSPSRDSRRSSG-GSRPPSPVKSRSSSP 1959
Score = 27.9 bits (59), Expect = 7.6
Identities = 21/78 (26%), Positives = 32/78 (41%)
Frame = +2
Query: 290 DQSPGPSKRRILSDIQNSILSSPINYKPTSPLIERLKSPETRNSPLKTMTNSPKSQRLTL 469
+ S G + R S SSP Y T P + S + P ++N +R +L
Sbjct: 2967 NDSNGSNTSRYQPGSHLSKSSSPRRYSLT-PRHDSNSSNTSEGRPESQLSNVSSPRRSSL 3025
Query: 470 TPKTSQETPKIRHRQSHP 523
TP+ + TP+ R P
Sbjct: 3026 TPRRNSGTPESLDRSMSP 3043
>SB_56456| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1266
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +2
Query: 404 PETRNSPLKTMTNSPKSQRLTLTPKTSQETPK 499
P +R +P +T TN+P+S+R S++TPK
Sbjct: 405 PSSRRNPRETKTNTPRSRR-----SNSRKTPK 431
>SB_54211| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 796
Score = 27.9 bits (59), Expect = 7.6
Identities = 17/36 (47%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +2
Query: 350 SSPINYKPTSPLIERLKSPET-RNSPLKTMTNSPKS 454
SS N KP SP P T RNSP ++ NSP S
Sbjct: 494 SSDTNKKP-SPSQASFSQPSTLRNSPSSSLRNSPSS 528
>SB_51982| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 260
Score = 27.9 bits (59), Expect = 7.6
Identities = 17/65 (26%), Positives = 33/65 (50%)
Frame = +2
Query: 299 PGPSKRRILSDIQNSILSSPINYKPTSPLIERLKSPETRNSPLKTMTNSPKSQRLTLTPK 478
P P+K+R SD+ + + +SP P+I R+ P T+ + T + + +S+ +
Sbjct: 127 PDPAKQRKSSDVSHRLSASP---NSRLPMIRRVSQPATKPT-TGTSSRTDRSRPAPSPAR 182
Query: 479 TSQET 493
+Q T
Sbjct: 183 VNQAT 187
>SB_47576| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 896
Score = 27.9 bits (59), Expect = 7.6
Identities = 10/43 (23%), Positives = 24/43 (55%)
Frame = +1
Query: 415 KLTSKNHDKLTKIPEINSHSENFTRNTKNQTSPVTPKVRSPLS 543
+ +KNH+++T + + +++ + T+N+T P R L+
Sbjct: 162 RAAAKNHERVTVVCDPEDYNKVLSEMTENETCDTLPDTRKTLA 204
>SB_41443| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 482
Score = 27.9 bits (59), Expect = 7.6
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = +2
Query: 374 TSPLIERLKSPETRNSPLKTMTNSPKSQRLTLTPKTSQETPKIRHRQS 517
TSPL + + +P KT +S K+ TPKT E I R S
Sbjct: 39 TSPLRNSSRLNTSTKTPTKTPKSSNKTPLTAKTPKTPSEDRFIASRSS 86
>SB_38979| Best HMM Match : I-set (HMM E-Value=0.11)
Length = 569
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +1
Query: 520 PKVRSPLSYEIAENILDRPSPLTSRSLRGTLKIKEVLEVRSWY 648
P + P Y E + P PLT + + L E L+V++WY
Sbjct: 364 PSIDLPERYSACEAV---PGPLTVKPVEDNLLEPEELQVQAWY 403
>SB_34828| Best HMM Match : W2 (HMM E-Value=6.9)
Length = 184
Score = 27.9 bits (59), Expect = 7.6
Identities = 25/115 (21%), Positives = 48/115 (41%)
Frame = +2
Query: 173 RINNRKLQDKFR*QRNKT*TGRSILAQHKKKMYPHSLSFDQSPGPSKRRILSDIQNSILS 352
R+ NR L + GRS+ ++ P +LS + PS + +++ ++ +
Sbjct: 60 RLYNRALNQWLTWLQQAKDNGRSV---NRGVGQPLNLSSPPNSTPSTAQAVANNDPTLPT 116
Query: 353 SPINYKPTSPLIERLKSPETRNSPLKTMTNSPKSQRLTLTPKTSQETPKIRHRQS 517
P + P +R++ P ++PK +R+ TP TP+ R S
Sbjct: 117 PPFSTPRPRPKAKRIRRLLPTPPPPTPPQSTPKPRRVLPTPPPKPPTPRPPRRAS 171
>SB_25665| Best HMM Match : TolA (HMM E-Value=1.7)
Length = 697
Score = 27.9 bits (59), Expect = 7.6
Identities = 21/85 (24%), Positives = 34/85 (40%)
Frame = +2
Query: 239 SILAQHKKKMYPHSLSFDQSPGPSKRRILSDIQNSILSSPINYKPTSPLIERLKSPETRN 418
S L+ +++ P L+ P P + L +IQN + S N + L+ L S
Sbjct: 346 SPLSSPTQQVNPIPLNSPILPAPQQNNTLQNIQNLLTISSQNPEAMQMLLSGLGSQPQVA 405
Query: 419 SPLKTMTNSPKSQRLTLTPKTSQET 493
L + +S +L P Q T
Sbjct: 406 QTLLNLLRQAQSPGASLAPSMQQAT 430
>SB_24123| Best HMM Match : RCSD (HMM E-Value=3.8)
Length = 255
Score = 27.9 bits (59), Expect = 7.6
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = +2
Query: 374 TSPLIERLKSPETRNSPLKTMTNSPKSQRLTLTPKTSQETPKIRHRQS 517
TSPL + + +P KT +S K+ TPKT E I R S
Sbjct: 39 TSPLRNSSRLNTSTKTPTKTPKSSNKTPLTAKTPKTPSEDRFIASRSS 86
>SB_11786| Best HMM Match : Complex1_LYR (HMM E-Value=5.6)
Length = 656
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +1
Query: 520 PKVRSPLSYEIAENILDRPSPLTSRSLRGTLKIKEVLEVRSWY 648
P + P Y E + P PLT + + L E L+V++WY
Sbjct: 535 PSIDLPERYSACEAV---PGPLTVKPVEDNLLEPEELQVQAWY 574
>SB_9381| Best HMM Match : TAF4 (HMM E-Value=2.9)
Length = 210
Score = 27.9 bits (59), Expect = 7.6
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Frame = -3
Query: 360 IGELSIEFCMSERILRFEGPGLWSKL-SEWGYIFFL--CCARMLLPVYVLLRCYRNL 199
IG L I+ + + I + E W+KL ++ FL C +R L+P +L+RC NL
Sbjct: 3 IGRLRIDIGLDKAIDKLENT--WAKLVRHQHHLRFLQDCISRNLVPRGLLMRCNLNL 57
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,284,075
Number of Sequences: 59808
Number of extensions: 397677
Number of successful extensions: 1585
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 1343
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1568
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1669334250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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