Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021760
         (653 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450 CY...    24   3.7  
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    24   4.8  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    24   4.8  

>AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450
           CYP12F3 protein.
          Length = 515

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 15/48 (31%), Positives = 21/48 (43%)
 Frame = +1

Query: 328 RHTKLYTQLTN*LQTYFTSDRKIKVTRDQKLTSKNHDKLTKIPEINSH 471
           R  KL+ +LTN +      +R +        T  NH  L K+  IN H
Sbjct: 261 RLMKLFDKLTNLILDQI--ERAMVSFEKNPTTDSNHSALKKLLSINKH 306


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 10/32 (31%), Positives = 21/32 (65%)
 Frame = -2

Query: 277 VGVHLLFVLCENASSCLRFVALLPEFILKFSV 182
           +G +++ V+ ++  + L F A++ +FI  FSV
Sbjct: 733 LGTYIISVILKDFKNALFFPAVVRQFISDFSV 764


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-signaling
            promoter protein.
          Length = 1197

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = +1

Query: 466  SHSENFTRNTKNQTSPVTPKVRSPLSYEI 552
            SHS+++ + T+N+   V P  R P+S E+
Sbjct: 1038 SHSKSWPKGTENENYMVPPSPR-PVSEEL 1065


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 640,671
Number of Sequences: 2352
Number of extensions: 12179
Number of successful extensions: 53
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 53
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)