Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021760
(653 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 31 0.67
At4g32790.1 68417.m04665 exostosin family protein contains Pfam ... 30 1.5
At4g09060.1 68417.m01493 expressed protein 29 2.7
At5g47070.1 68418.m05800 protein kinase, putative similar to pro... 29 3.6
At4g11670.1 68417.m01865 expressed protein contains Pfam PF05664... 29 3.6
At3g48060.1 68416.m05240 bromo-adjacent homology (BAH) domain-co... 29 3.6
At1g74160.1 68414.m08589 expressed protein 29 3.6
At5g44970.1 68418.m05515 hypothetical protein contains a novel d... 28 4.7
At5g24220.1 68418.m02850 lipase class 3-related 28 4.7
At4g19510.2 68417.m02870 disease resistance protein (TIR-NBS-LRR... 28 4.7
At4g19510.1 68417.m02869 disease resistance protein (TIR-NBS-LRR... 28 4.7
At3g06290.1 68416.m00722 SAC3/GANP family protein contains Pfam ... 28 4.7
At5g53870.1 68418.m06701 plastocyanin-like domain-containing pro... 28 6.2
At5g18570.1 68418.m02195 GTP1/OBG family protein similar to SP|P... 28 6.2
At3g09510.1 68416.m01130 hypothetical protein 28 6.2
At1g17580.1 68414.m02165 myosin, putative similar to myosin GI:4... 28 6.2
At1g63550.1 68414.m07184 hypothetical protein low similarity to ... 27 8.2
At1g51170.1 68414.m05754 protein kinase family protein 27 8.2
At1g31440.1 68414.m03850 SH3 domain-containing protein 1 (SH3P1)... 27 8.2
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 31.1 bits (67), Expect = 0.67
Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 1/79 (1%)
Frame = +2
Query: 290 DQSPGPSKRRILSDIQNSILSSPINYKPTSPLIERLKSPETRNSPLKTMTNSPKSQR-LT 466
++SP P + + + S+P KP SP E K+ + + P SPK +
Sbjct: 438 EESPKPQQPSPKPETPSHEPSNPKEPKPESPKQESPKTEQPKPKPESPKQESPKQEAPKP 497
Query: 467 LTPKTSQETPKIRHRQSHP 523
PK E+PK + P
Sbjct: 498 EQPKPKPESPKQESSKQEP 516
>At4g32790.1 68417.m04665 exostosin family protein contains Pfam
domain, PF03016: Exostosin family
Length = 593
Score = 29.9 bits (64), Expect = 1.5
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 304 PLEAQDPLRHTKLYTQLTN*LQTYFTSDRKIKV 402
PL DPL HT LY L+ ++Y ++K+KV
Sbjct: 237 PLIENDPLLHTPLYWNLSMFKRSYELMEKKLKV 269
>At4g09060.1 68417.m01493 expressed protein
Length = 341
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = +2
Query: 314 RRILSDIQNSILSSPINYKPTSPLIERLKSPETRNSPLKTMT--NSPKSQRLTLTP 475
R++L Q+ + S+ N S + KSP+T +SP++ +SP+ R L+P
Sbjct: 273 RKLLRQQQSPLCSADKNRNSASAKSNKRKSPKTMSSPVEKRLEFSSPEISRKPLSP 328
>At5g47070.1 68418.m05800 protein kinase, putative similar to
protein kinase [Lophopyrum elongatum]
gi|13022177|gb|AAK11674
Length = 410
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +3
Query: 210 NNATKRKQEEAFSHNTKRRCTPTRLASTKVLAPRSAGSSQTYKTLYSAHQ 359
NN KRK +E ++ + +S + PRS S ++ K LY+ +
Sbjct: 19 NNKNKRKGKELLQNSAPELTNRSETSSFNLQTPRSLPSPRSIKDLYTERE 68
>At4g11670.1 68417.m01865 expressed protein contains Pfam PF05664:
Protein of unknown function (DUF810)
Length = 985
Score = 28.7 bits (61), Expect = 3.6
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +1
Query: 352 LTN*LQTYFTSDRKIKVTRDQKLTSKNHDKLTKIPEI-NSHSE 477
LTN ++ Y T RKI+ + L+ K DK P+I N+HSE
Sbjct: 189 LTNSVEAYPTHRRKIEKSSRLMLSLKRKDKPHLQPQISNTHSE 231
>At3g48060.1 68416.m05240 bromo-adjacent homology (BAH)
domain-containing protein contains Pfam profile PF01426:
BAH domain
Length = 1611
Score = 28.7 bits (61), Expect = 3.6
Identities = 23/94 (24%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Frame = +1
Query: 367 QTYFTSDRKIKVTRDQKLTSKNHDKL-TKIPEINSHSENFTRNTKNQTSPVTPKVRSPLS 543
Q+ TS++ ++V LT + +KL K+P S +++ + + +PV +V SP+
Sbjct: 600 QSSLTSEKTLEVP----LTEGSGNKLIVKLPRGRSPAQSVSGGSLEDPAPVNSRVSSPV- 654
Query: 544 YEIAENILDRPSPLTSRSLRGTLKIKEVLEVRSW 645
+ + + + D + S R + VL SW
Sbjct: 655 HTVKQELCDNNWREKNHSYRA--DVSSVLNAESW 686
>At1g74160.1 68414.m08589 expressed protein
Length = 1030
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +2
Query: 308 SKRRILSDIQNSILSSPINYKPTSPLIERLKSPETRNSPLKTMTNSPKSQR 460
S+ R+ S N + SPI + L+E+ P + P+ ++T K +R
Sbjct: 472 SRTRVQSSSSNQVYQSPIVIMKPAKLVEKAGIPASSLIPIHSLTGIKKIRR 522
>At5g44970.1 68418.m05515 hypothetical protein contains a novel
domain with similarity to F-box domain;
Length = 389
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +2
Query: 377 SPLIERLKSPETRNSPLKTMTNSP 448
SP++++LK P +SP+ TMTN P
Sbjct: 344 SPILKKLK-PSFTDSPMSTMTNLP 366
>At5g24220.1 68418.m02850 lipase class 3-related
Length = 376
Score = 28.3 bits (60), Expect = 4.7
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +2
Query: 23 FIPFILVDN*TILDCYDNGLVIXVF*IRIKTLCQN 127
F F LV+ T++D YD+ + VF ++ LCQN
Sbjct: 79 FFNFSLVE--TLIDDYDSSIYGAVFEYKLSNLCQN 111
>At4g19510.2 68417.m02870 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1049
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 373 YFTSDRKIKVTRDQKLTSKNHDKLTKIPEIN 465
Y R + +TRD+KL KN D +P +N
Sbjct: 317 YRQGSRIVIITRDKKLLQKNADATYVVPRLN 347
>At4g19510.1 68417.m02869 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1049
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 373 YFTSDRKIKVTRDQKLTSKNHDKLTKIPEIN 465
Y R + +TRD+KL KN D +P +N
Sbjct: 317 YRQGSRIVIITRDKKLLQKNADATYVVPRLN 347
>At3g06290.1 68416.m00722 SAC3/GANP family protein contains Pfam
profile: PF03399 SAC3/GANP family
Length = 1720
Score = 28.3 bits (60), Expect = 4.7
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +1
Query: 445 TKIPEINSHSENFTRNTKNQTSPVTPKVRSPLSYEIAENI 564
++ P S +F K +SP T + RSP Y I E+I
Sbjct: 356 SQFPGQPSSVNSFNNARKTNSSPATKRTRSPPVYPIEEDI 395
>At5g53870.1 68418.m06701 plastocyanin-like domain-containing
protein contains similarity to SP|Q02917 Early nodulin
55-2 precursor {Glycine max}; PF02298: Plastocyanin-like
domain
Length = 370
Score = 27.9 bits (59), Expect = 6.2
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +2
Query: 350 SSPINYKPTSPLIERLKSPETRNSPLKTMTNSPKSQRLTLTPKTSQETP 496
SSP P +P +SP +SP + +P Q L P S+ TP
Sbjct: 283 SSPAQ-SPATPSPMTPQSPSPVSSPSPDQSAAPSDQSTPLAPSPSETTP 330
>At5g18570.1 68418.m02195 GTP1/OBG family protein similar to
SP|P20964 Spo0B-associated GTP-binding protein {Bacillus
subtilis}; contains Pfam profile PF01018: GTP1/OBG
family
Length = 681
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 382 SDRKIKVTRDQKLTSKNHDKLTKIPEINSHSENFTR 489
S RK K+ R+ +L S+ DKL + + + +TR
Sbjct: 37 SPRKTKLQREVELKSRGGDKLQPVSDAGGEATTYTR 72
>At3g09510.1 68416.m01130 hypothetical protein
Length = 484
Score = 27.9 bits (59), Expect = 6.2
Identities = 17/57 (29%), Positives = 25/57 (43%)
Frame = +1
Query: 433 HDKLTKIPEINSHSENFTRNTKNQTSPVTPKVRSPLSYEIAENILDRPSPLTSRSLR 603
HD T IP IN + T+ P+ PK++ L + L LT+R +R
Sbjct: 140 HDPSTNIPAINPPHGSIDLKTRIWNLPIMPKLKHFL-WRALSQALATTERLTTRGMR 195
>At1g17580.1 68414.m02165 myosin, putative similar to myosin GI:433663
from (Arabidopsis thaliana)
Length = 1520
Score = 27.9 bits (59), Expect = 6.2
Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
Frame = +2
Query: 389 ERLKSPETRNSPLK--TMTNSPKSQRLTLTPKTS--QETPK 499
E++ S E+ N L+ T+T SP ++ L L PKT+ Q TP+
Sbjct: 1032 EKVFSLESENKVLRQQTLTISPTTRALALRPKTTIIQRTPE 1072
>At1g63550.1 68414.m07184 hypothetical protein low similarity to
receptor-like protein kinase 5 [Arabidopsis thaliana]
GI:13506747; contains Pfam profile: PF01657 Domain of
unknown function DUF26
Length = 299
Score = 27.5 bits (58), Expect = 8.2
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = +2
Query: 317 RILSDIQNSILSSPINYKPTSPLIERLKSPETRNSPLKTMTNSPKSQRLTLTPKTSQETP 496
+ L Q S+L SP P SP +SP ++SP ++ +P S L TP + P
Sbjct: 213 KCLLRFQTSVLLSP----PPSPSAPPPRSPPPKSSPPSSLPQTP-SPPLVFTPPQNVPNP 267
>At1g51170.1 68414.m05754 protein kinase family protein
Length = 404
Score = 27.5 bits (58), Expect = 8.2
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +2
Query: 347 LSSPINYKPTSPLIERLKSPETRNSPLKTMTNSPKSQRLTLTPKTSQETPKI 502
LS +N KPT P L PE +P ++++ KS R+ K ++ ++
Sbjct: 174 LSCSLN-KPTRPEFYHLSDPEPDPNPESNLSHNKKSLRIFRQKKKKTKSARV 224
>At1g31440.1 68414.m03850 SH3 domain-containing protein 1 (SH3P1)
nearly identical to SH3 domain-containing protein 1
[Arabidopsis thaliana] GI:16974676; contains Pfam
profile PF00018: SH3 domain
Length = 439
Score = 27.5 bits (58), Expect = 8.2
Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = +2
Query: 326 SDIQNSILSSPINYKPTSPLIERLKSPE--TRNSPLKTMTNSPKSQRLTLTPKTSQETPK 499
S+ I S+P+ S E +P+ T+ SP M +SP+ + + K + +P+
Sbjct: 285 SNSSGEIKSNPLGKIKASRREEIKSNPQEVTKPSPKDEMKSSPQEETKSNHQKEIKSSPQ 344
Query: 500 IRHRQSHPK*DHRYH 544
++S+ DH H
Sbjct: 345 EEIKKSNGSDDHHNH 359
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,627,721
Number of Sequences: 28952
Number of extensions: 287329
Number of successful extensions: 1056
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1008
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1056
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1363910256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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