Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021759
(780 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_49329| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 55 7e-08
SB_52663| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.50006e-41) 52 7e-07
SB_38490| Best HMM Match : Neur_chan_LBD (HMM E-Value=2e-24) 49 5e-06
SB_59159| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 9e-06
SB_31671| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 48 9e-06
SB_17986| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-05
SB_31676| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 47 1e-05
SB_46592| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 6e-05
SB_54107| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.4e-35) 44 2e-04
SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_37593| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 42 4e-04
SB_27375| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.3e-07) 42 6e-04
SB_44970| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 42 6e-04
SB_38489| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.1e-24) 42 7e-04
SB_59781| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 40 0.002
SB_50983| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 39 0.004
SB_37778| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_30805| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.9e-06) 38 0.007
SB_73| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_53336| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.022) 38 0.007
SB_453| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.1e-08) 38 0.009
SB_38726| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.012
SB_51056| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.3e-24) 36 0.028
SB_4545| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.049
SB_37177| Best HMM Match : Neur_chan_LBD (HMM E-Value=5.3) 34 0.15
SB_43224| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.002) 32 0.60
SB_39538| Best HMM Match : VWA (HMM E-Value=0) 31 0.79
SB_19927| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.9e-07) 31 1.4
SB_4972| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.92) 31 1.4
SB_14827| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.8) 30 1.8
SB_32009| Best HMM Match : PKD (HMM E-Value=1.9e-19) 30 2.4
SB_5179| Best HMM Match : Neur_chan_memb (HMM E-Value=3.5e-08) 30 2.4
SB_54151| Best HMM Match : PAN (HMM E-Value=0.00084) 29 3.2
SB_20985| Best HMM Match : Neur_chan_memb (HMM E-Value=4.3e-10) 29 3.2
SB_15521| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.1e-15) 29 3.2
SB_53420| Best HMM Match : Hist_deacetyl (HMM E-Value=0) 29 4.2
SB_52012| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_30491| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_41593| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08) 29 5.6
SB_27095| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.6
SB_54839| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.6
SB_32914| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08) 29 5.6
SB_31861| Best HMM Match : rve (HMM E-Value=3.6e-07) 29 5.6
SB_30974| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.9e-07) 28 7.4
SB_13360| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 28 7.4
SB_264| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_227| Best HMM Match : E1-E2_ATPase (HMM E-Value=0) 28 7.4
SB_37942| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.7e-05) 28 9.8
SB_24810| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.8
SB_11346| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.8
SB_12902| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.8
>SB_49329| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 716
Score = 54.8 bits (126), Expect = 7e-08
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Frame = +2
Query: 257 WIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGD--YALRAR--VSNNGSV 421
W + LSWNA E+G S + ++LW+PD+ L N A ++A Y +A+ VS+ G
Sbjct: 119 WKNPLLSWNASEYGGISQVNLEPDQLWKPDIYLYNNADSSADGSLYGFKAKIKVSHTGLN 178
Query: 422 SWIKRLDISTPISMQLDNWPNDMQTCTFK 508
W+ ++T + + +P D Q+CT K
Sbjct: 179 MWLAPTILTTSCKINVKYFPFDQQSCTLK 207
>SB_52663| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.50006e-41)
Length = 342
Score = 51.6 bits (118), Expect = 7e-07
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
Frame = +2
Query: 257 WIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAG--DYALRARVSNNGSVSW 427
W D RL+WN E+G + S+ +W PD+ +LN+A + +R +++ G V W
Sbjct: 47 WNDTRLAWNETEYGGIKQMTLRSKLIWTPDISVLNSANKDMDLREKNIRLFINSAGEVLW 106
Query: 428 IKRLDISTPISMQLDNWPNDMQTCTFK 508
+ L + T M + ++P D Q C +
Sbjct: 107 MNPLILHTSCGMDIAHFPFDNQACELR 133
>SB_38490| Best HMM Match : Neur_chan_LBD (HMM E-Value=2e-24)
Length = 478
Score = 48.8 bits (111), Expect = 5e-06
Identities = 39/111 (35%), Positives = 56/111 (50%), Gaps = 5/111 (4%)
Frame = +2
Query: 257 WIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWI 430
W++ LSWNA E+G +T V +RLW PD+VL NA A + + + SW+
Sbjct: 79 WVNPSLSWNASEFGGVNTLHVEPDRLWVPDIVLYNNACAMDIRYFPFDEQSCDLQFASWM 138
Query: 431 KRLDISTPISMQLD-NWPNDMQTCTFK--SVLGCTIVTKWIS*LTKEYTVC 574
D S + M++D N M T T K + TI K ++ LT +YT C
Sbjct: 139 --YDTS-KLEMKIDANETKVMDTFTNKEWEIPKLTIKKKRVNMLTIKYTCC 186
>SB_59159| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 686
Score = 48.0 bits (109), Expect = 9e-06
Identities = 22/86 (25%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Frame = +2
Query: 257 WIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAA-ATTAGD---YALRARVSNNGSV 421
W D L+WN ++G + V +W PD+VL N + ++G+ + + + ++G+V
Sbjct: 219 WYDPWLTWNESDFGGMKSIKVDPSCVWVPDIVLYNNVDSDSSGEMYKFTTKVNIHSDGTV 278
Query: 422 SWIKRLDISTPISMQLDNWPNDMQTC 499
W+ + + + + + N+P D Q C
Sbjct: 279 QWLSPIQVKSECKIDITNFPLDEQFC 304
>SB_31671| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 541
Score = 48.0 bits (109), Expect = 9e-06
Identities = 25/88 (28%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Frame = +2
Query: 257 WIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYALRARVSNN------G 415
W D L WN ++G + ++ +R+W+PDV+L N A+T +L ++ N G
Sbjct: 88 WKDHLLKWNPDDFGGIKSINIAPDRVWKPDVLLYNRASTDLRFGSLNNKIDTNVIVNHDG 147
Query: 416 SVSWIKRLDISTPISMQLDNWPNDMQTC 499
S +W+ I + + + +P D+Q+C
Sbjct: 148 STTWLAPAIIKSECKIDVRFFPFDVQSC 175
Score = 35.1 bits (77), Expect = 0.064
Identities = 12/35 (34%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +2
Query: 257 WIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 358
W D L WN ++ G + +++ +++W+PDV+L N
Sbjct: 506 WADHFLQWNPDDFSGIKSIIIAPDKVWKPDVLLFN 540
>SB_17986| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 724
Score = 47.2 bits (107), Expect = 1e-05
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Frame = +2
Query: 257 WIDKRLSWNAGEWGCSTWLVSSER--LWRPDVVLLNAAATTAGDYALR----ARVSNNGS 418
W D +L W+ ++G +V ER +W PDVVLLN A ++ + V +NG
Sbjct: 43 WWDHKLQWDQSKYGGIKEVVLPERGVIWVPDVVLLNNAEKSSMGKPVNEGNPVLVESNGV 102
Query: 419 VSWIKRLDISTPISMQLDNWPNDMQTCTFK 508
V W+ + + + M + ++P D Q C K
Sbjct: 103 VRWLAPVVLKSRCKMDVRSYPFDEQYCGLK 132
>SB_31676| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 422
Score = 47.2 bits (107), Expect = 1e-05
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 7/91 (7%)
Frame = +2
Query: 257 WIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYALRARV------SNNG 415
W D L+WN ++G + V +W+PD++L N A+T +L ++ S++G
Sbjct: 30 WKDHLLNWNPEDFGGVKSINVEPNNVWKPDILLYNPASTDLRVESLYKKIDTKVILSSDG 89
Query: 416 SVSWIKRLDISTPISMQLDNWPNDMQTCTFK 508
S +W+ I T + + +P D+Q C K
Sbjct: 90 SAAWLSPAIIKTECKVDVRLFPFDVQYCDLK 120
>SB_46592| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 648
Score = 45.2 bits (102), Expect = 6e-05
Identities = 26/91 (28%), Positives = 40/91 (43%), Gaps = 6/91 (6%)
Frame = +2
Query: 248 SNDWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLN---AAATTAGDYAL---RARVSN 409
S W D L W+ ++ S + +W PDV L+N AG L V
Sbjct: 401 SQQWKDPSLQWDKAKYNLHKTRFSPKEIWVPDVSLINNGDKLVHVAGGAELFNADTVVRQ 460
Query: 410 NGSVSWIKRLDISTPISMQLDNWPNDMQTCT 502
+G V WI + ++ ++++ WP D Q CT
Sbjct: 461 SGKVDWIAQASFTSTCNLRVRFWPMDDQFCT 491
>SB_54107| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.4e-35)
Length = 479
Score = 43.6 bits (98), Expect = 2e-04
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Frame = +2
Query: 257 WIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAG---DYALRARVSNNGSV 421
W + L WN +G + VS ++W PD+VL N A A+T G ++ R VS++G
Sbjct: 40 WYNPFLRWNETFYGGIKEINVSPLQVWTPDLVLYNNADASTDGSLENFKTRIIVSSDGKN 99
Query: 422 SWIKRLDISTPISMQLDNWPNDMQTCTFK 508
W+ + S+ ++++ +P D Q C+ K
Sbjct: 100 MWLAPVIFSSSCTIKIKYFPFDDQYCSLK 128
>SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 705
Score = 42.7 bits (96), Expect = 3e-04
Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Frame = +2
Query: 257 WIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN--AAATTAGDYAL--RARVSNNGSV 421
W++ L+W+ +G T + V+ +W+PD+VL + T Y RA + +NG
Sbjct: 68 WVNPFLTWDPKMYGGLTSINVNPNMIWKPDIVLYHNIGFGETGAIYKFDTRATIMHNGYT 127
Query: 422 SWIKRLDISTPISMQLDNWPNDMQTCTFK 508
W +I + ++ + +P D Q C K
Sbjct: 128 EWFAPTEIHSICAIDITYFPFDEQFCKMK 156
>SB_37593| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 548
Score = 42.3 bits (95), Expect = 4e-04
Identities = 23/89 (25%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Frame = +2
Query: 257 WIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLL-NAAATTAG---DYALRARVSNNGSV 421
W + L+WN ++G + ++ ++W PD++L NA T AG Y S++G+
Sbjct: 129 WTNPMLAWNTSKYGGIESVNLNPAKVWIPDIILYNNADETYAGGLEKYKTSVIASSDGTQ 188
Query: 422 SWIKRLDISTPISMQLDNWPNDMQTCTFK 508
W ++ ++ + +P D Q C+ K
Sbjct: 189 EWNSPASFTSTCNINVRYFPFDSQNCSLK 217
>SB_27375| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.3e-07)
Length = 240
Score = 41.9 bits (94), Expect = 6e-04
Identities = 27/97 (27%), Positives = 40/97 (41%), Gaps = 7/97 (7%)
Frame = +2
Query: 239 GRSSNDWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATT---AGDYAL---RA 397
G + W + L W+ ++ + + +W PD+ LLN T AG ++
Sbjct: 120 GVTERTWRNPYLKWDKAKYQNRDRVHFDPKEIWVPDISLLNNGDNTVKMAGGRSIFLTNV 179
Query: 398 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFK 508
V N G W + + SM L WP D QTC K
Sbjct: 180 VVENTGKCVWSGPVTFTFTCSMALSRWPFDQQTCAMK 216
>SB_44970| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 506
Score = 41.9 bits (94), Expect = 6e-04
Identities = 22/89 (24%), Positives = 42/89 (47%), Gaps = 5/89 (5%)
Frame = +2
Query: 257 WIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATTAGD----YALRARVSNNGSV 421
W ++ L+W+ + G T + ++ +W PD+VL ++A + Y +S +GS
Sbjct: 49 WDNELLTWHPSNYEGVQTVRLDAKSVWIPDIVLYDSADSVFSGGHEKYKTHVIISKDGSS 108
Query: 422 SWIKRLDISTPISMQLDNWPNDMQTCTFK 508
+W + + + +P D QTC K
Sbjct: 109 AWFSPASFRSTCKIDVTYFPFDEQTCYMK 137
>SB_38489| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.1e-24)
Length = 445
Score = 41.5 bits (93), Expect = 7e-04
Identities = 28/97 (28%), Positives = 44/97 (45%), Gaps = 13/97 (13%)
Frame = +2
Query: 257 WIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAA--ATTAGD----------YALRA 397
W + LSWNA E+G S VS +R W PD++L N+ +A + Y +
Sbjct: 25 WTNPDLSWNASEYGGVSQIYVSPKRPWTPDILLYNSVRFVDSAEEDDRLGGGTEKYKTQI 84
Query: 398 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFK 508
+ +NG SW+ + + +P D Q CT +
Sbjct: 85 EIRSNGYNSWLSPAMFKSTCDVNTRYFPFDDQHCTLE 121
>SB_59781| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 275
Score = 40.3 bits (90), Expect = 0.002
Identities = 21/89 (23%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Frame = +2
Query: 257 WIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAAT----TAGDYALRARVSNNGSV 421
W + ++WN E+G + + LW+PD+ L N A + + + + +V+ +G+
Sbjct: 48 WENPLVAWNKSEYGGIVQVNLDPSTLWKPDIYLYNNADSGYDGSLYGFTAKIKVNYSGTN 107
Query: 422 SWIKRLDISTPISMQLDNWPNDMQTCTFK 508
+W+ +T + + +P D Q C K
Sbjct: 108 TWLAPKIFTTSCKINVKYFPFDQQECRLK 136
>SB_50983| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 434
Score = 39.1 bits (87), Expect = 0.004
Identities = 24/86 (27%), Positives = 36/86 (41%), Gaps = 5/86 (5%)
Frame = +2
Query: 257 WIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA--ATTAGDYALRARVS--NNGSV 421
W D L W+ + G T + V LW+PD+VL N Y +V + G +
Sbjct: 91 WTDAWLKWDPAKHGGITAINVDPSFLWKPDMVLYNNVNDEDRGEQYLFNTKVIIYSTGDI 150
Query: 422 SWIKRLDISTPISMQLDNWPNDMQTC 499
W + T + + +P D QTC
Sbjct: 151 EWYSPNILKTHCKIDIQYFPFDTQTC 176
>SB_37778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 312
Score = 38.3 bits (85), Expect = 0.007
Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Frame = +2
Query: 257 WIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAG---DYALRARVSNNGSV 421
W + L+W+ +G T + V R+WRPD++L NA T G + + ++ +GS
Sbjct: 79 WNNPLLTWDPTHFGNLTSINVDPLRVWRPDLILYNNADRDTDGALDRFYTKVQLKFDGSS 138
Query: 422 SWIKRLDISTPISMQLDNWPNDMQTCTFK 508
W+ + + + +P D Q+C K
Sbjct: 139 LWLAPIIFKSTCKFDVAYFPFDEQSCILK 167
>SB_30805| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.9e-06)
Length = 147
Score = 38.3 bits (85), Expect = 0.007
Identities = 24/89 (26%), Positives = 38/89 (42%), Gaps = 7/89 (7%)
Frame = +2
Query: 257 WIDKRLSWNA-GEWGCSTWLVSSERLWRPDVVLLNAAATT---AGD---YALRARVSNNG 415
W D L W ++ + S + +W PDV L+N A + AG + V G
Sbjct: 2 WNDVFLKWRGEAKYQVTKTRFSPQEIWVPDVALINNADKSVRLAGGPELFKTDLNVWQGG 61
Query: 416 SVSWIKRLDISTPISMQLDNWPNDMQTCT 502
V W+ ++ +++ WP D Q CT
Sbjct: 62 KVEWVAPASFTSDCKLRVRYWPIDDQFCT 90
>SB_73| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 930
Score = 38.3 bits (85), Expect = 0.007
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
Frame = +2
Query: 257 WIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAA----TTAGDYALRARVSNNGSV 421
W D L WN ++G T + + + +W P V++ N A + R V ++G+V
Sbjct: 551 WKDAFLQWNPADYGGVTQINLEASDIWTPPVIIYNQAGDLGESITSSNTPRPVVRSDGTV 610
Query: 422 SWIKRLDISTPISMQLDNWPNDMQTC 499
W+ I + + + +P D Q C
Sbjct: 611 LWMVPTVIKSSCVIDVKYFPFDQQLC 636
>SB_53336| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.022)
Length = 91
Score = 38.3 bits (85), Expect = 0.007
Identities = 15/60 (25%), Positives = 31/60 (51%)
Frame = +2
Query: 323 ERLWRPDVVLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCT 502
+++W+PD + N ++T + + G V + +R+ + M L N+P D Q+C+
Sbjct: 26 KQIWKPDTYINNEKSSTVPENQFLLTIDPEGRVVYSQRMTVVASCMMYLRNYPMDTQSCS 85
>SB_453| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.1e-08)
Length = 362
Score = 37.9 bits (84), Expect = 0.009
Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Frame = +2
Query: 257 WIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVS 424
W D RL WN ++G +++ S +LW PD+ L N A + V+++GS+
Sbjct: 280 WTDFRLRWNHTKYGGIKSFVTPSRQLWLPDITLYNNANDNYEKEKEEYYGLTVNSDGSIG 339
Query: 425 WIKRLDISTPISMQLDNWPNDMQ 493
W + ++ + +P D Q
Sbjct: 340 WYYPTIFKSSCTIDVTYFPFDDQ 362
>SB_38726| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 37.5 bits (83), Expect = 0.012
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Frame = +2
Query: 323 ERLWRPDVVLLNAAATTAG--DYAL---RARVSNNGSVSWIKRLDISTPISMQLDNWPND 487
+++W+PD L N AG D +L RV NG+V++ R+ + M+ N+P D
Sbjct: 135 DKIWKPDTYLENVKKIDAGSDDKSLVHKGFRVYPNGNVTFSTRISATLSCKMEFRNFPMD 194
Query: 488 MQTC 499
Q+C
Sbjct: 195 RQSC 198
>SB_51056| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.3e-24)
Length = 373
Score = 36.3 bits (80), Expect = 0.028
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +2
Query: 257 WIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA 364
W D RL WN + G ++ + RLW PD+ L N A
Sbjct: 69 WRDPRLRWNVSAYDGVDNIVIKASRLWLPDITLYNNA 105
>SB_4545| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 35.5 bits (78), Expect = 0.049
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 6/90 (6%)
Frame = +2
Query: 257 WIDKRLSWNAGEWGCSTWLVSSE--RLWRPDVVLLNA--AATTAGDYALRARVS--NNGS 418
W D+RL A S L E ++WRPD NA ++ TA D + + ++ NG
Sbjct: 12 WKDERL---ANRLNKSVVLKGDEITKMWRPDPFCYNARESSLTASDDDINSMMTIHPNGD 68
Query: 419 VSWIKRLDISTPISMQLDNWPNDMQTCTFK 508
V + + I+ M+L ++P D Q C K
Sbjct: 69 VVYSRMTIITAECEMKLHDFPMDEQQCHLK 98
>SB_37177| Best HMM Match : Neur_chan_LBD (HMM E-Value=5.3)
Length = 79
Score = 33.9 bits (74), Expect = 0.15
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = +2
Query: 257 WIDKRLSWNAGEWGCSTWLVSSER--LWRPDVVLLN 358
W D +L W+ ++G +V ER +W PDVVLLN
Sbjct: 43 WWDHKLQWDQSKYGGIKEVVLPERGVIWVPDVVLLN 78
>SB_43224| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.002)
Length = 123
Score = 31.9 bits (69), Expect = 0.60
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +2
Query: 254 DWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 358
+W + L WNA E+G L +S +W PD+VL N
Sbjct: 87 NWNNHLLRWNASEYGGIDKLNISPTLMWLPDIVLHN 122
>SB_39538| Best HMM Match : VWA (HMM E-Value=0)
Length = 3208
Score = 31.5 bits (68), Expect = 0.79
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +3
Query: 582 RSVGCDGSVQCGAEPGPWRGGSSRGNVPDVFPETRPGTRAGGR 710
R +G +Q G++PG G N P P +PG + GG+
Sbjct: 1182 RGIGNQKGIQSGSQPGIQPNGQPGVNQPGSQPGNQPGNQPGGQ 1224
>SB_19927| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.9e-07)
Length = 301
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +2
Query: 398 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFK 508
R+ NG++ + RL +++ M L N+P D Q C K
Sbjct: 64 RIFPNGTLLYSMRLKVTSQCPMDLRNFPMDSQKCRLK 100
>SB_4972| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.92)
Length = 88
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +2
Query: 257 WIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVL 352
W + L+WN E+G T VS +W PD+VL
Sbjct: 53 WYNPLLTWNVTEYGGLKTINVSPTIIWLPDIVL 85
>SB_14827| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.8)
Length = 156
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +2
Query: 257 WIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLN 358
W ++ L+W+ E+G ST V+ +++W PD+ L N
Sbjct: 2 WRNEYLTWDPKEFGGISTINVNVDKVWVPDIYLYN 36
>SB_32009| Best HMM Match : PKD (HMM E-Value=1.9e-19)
Length = 3083
Score = 29.9 bits (64), Expect = 2.4
Identities = 21/85 (24%), Positives = 33/85 (38%), Gaps = 2/85 (2%)
Frame = +2
Query: 287 GEWG--CSTWLVSSERLWRPDVVLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPIS 460
G+W C W+ R DV+L A+ +Y R V + + L S
Sbjct: 2401 GQWNFVCDRWIAVENEECRTDVILYAASQAELNNYT-RIFVKKTSNDLYDGHLWFSVVAK 2459
Query: 461 MQLDNWPNDMQTCTFKSVLGCTIVT 535
++ + C S+L CT+VT
Sbjct: 2460 PPTSSFTRVQRCCCCLSLLFCTMVT 2484
>SB_5179| Best HMM Match : Neur_chan_memb (HMM E-Value=3.5e-08)
Length = 428
Score = 29.9 bits (64), Expect = 2.4
Identities = 13/40 (32%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
Frame = +2
Query: 242 RSSNDWIDKRLSWNAG-EWGCSTWLVSSERLWRPDVVLLN 358
R +W D L WN G V +W PD+ L+N
Sbjct: 27 RIYQEWKDPNLKWNKSIAQGVEEIFVDPSDIWTPDIALMN 66
>SB_54151| Best HMM Match : PAN (HMM E-Value=0.00084)
Length = 326
Score = 29.5 bits (63), Expect = 3.2
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = -3
Query: 652 RELPPRHGPGSAPHWTDPSHPTLLTRTYC 566
R+L P P + +W DP L R YC
Sbjct: 116 RDLAPNADPTTGEYWIDPEADRTLLRVYC 144
>SB_20985| Best HMM Match : Neur_chan_memb (HMM E-Value=4.3e-10)
Length = 517
Score = 29.5 bits (63), Expect = 3.2
Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Frame = +2
Query: 329 LWRPDVVLLNAAATTAGDYAL---RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 499
+W PD V ++A+ + + + V+ G V W R + M L +P D QTC
Sbjct: 38 VWVPDTVFVDASHAYMHNVMVANHKLDVTPGGRVFWGTRATLIARCHMNLRRYPMDEQTC 97
Query: 500 TFKSV 514
+
Sbjct: 98 NLSII 102
>SB_15521| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.1e-15)
Length = 296
Score = 29.5 bits (63), Expect = 3.2
Identities = 16/62 (25%), Positives = 25/62 (40%), Gaps = 3/62 (4%)
Frame = +2
Query: 323 ERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQ 493
+ +W P NA D + NG V + RL I+ + L +P+D+Q
Sbjct: 32 DEIWIPSTYFFNAKKAYFHDVTTENYLLMIKPNGDVFYSVRLTITMACKLTLQMFPHDVQ 91
Query: 494 TC 499
C
Sbjct: 92 VC 93
>SB_53420| Best HMM Match : Hist_deacetyl (HMM E-Value=0)
Length = 360
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +2
Query: 305 TWLVSSERLWRPDVVLLNAAATTAGDYAL-RARVSNNG 415
TWL+ +WRPD+VL +A D L R ++++NG
Sbjct: 272 TWLLD---MWRPDIVLYDAGVDPHVDDVLGRLKLTDNG 306
>SB_52012| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1143
Score = 29.1 bits (62), Expect = 4.2
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = -2
Query: 362 PRLAVPRQASTSVPRTPAKCCSPIPLRSNSVVCRSNHLKICQY-PHGGLGLTNVSMSQMQ 186
P++ + + PRT A+ IP S S VC+S K Y H + TN +S
Sbjct: 322 PQIVKRENSDLTRPRTKAQVTQNIPTVSPSRVCKSPSDKSQGYHNHYHVSTTNAVISTNH 381
Query: 185 GQVDYD 168
Q D++
Sbjct: 382 SQEDFN 387
>SB_30491| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1516
Score = 29.1 bits (62), Expect = 4.2
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = -2
Query: 215 LTNVSMSQMQGQVDYDFGVGGRLPIVRCEERVDHE 111
L+++S +G VD FGV + +R +++D+E
Sbjct: 594 LSHISGGDKEGDVDLHFGVNSQTGAIRLNKKLDYE 628
>SB_41593| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08)
Length = 319
Score = 28.7 bits (61), Expect = 5.6
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +2
Query: 401 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCT 502
V+N G V W + S+++ WP D+Q C+
Sbjct: 21 VANTGKVVWQSPATFRSECSIKIRYWPFDVQKCS 54
>SB_27095| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 534
Score = 28.7 bits (61), Expect = 5.6
Identities = 27/104 (25%), Positives = 44/104 (42%), Gaps = 9/104 (8%)
Frame = +2
Query: 257 WIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATT-----AGDYALRARVSNNGSV 421
W D RL+++ E + +W PD + N ++T +Y L + NG+
Sbjct: 102 WHDPRLAFDLPE-AITVQGGMLNDIWIPDTLFTNEKSSTFHKVTQDNYLLS--IWPNGTT 158
Query: 422 SWIKRLDISTPISMQLDNWPNDMQTC--TFKSVLGCT--IVTKW 541
R+ ++ M L +P D QTC S G T ++ KW
Sbjct: 159 YLSMRISLTGICPMDLRKYPMDTQTCYLNIMSYSGSTDNLILKW 202
>SB_54839| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1409
Score = 28.7 bits (61), Expect = 5.6
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 5/45 (11%)
Frame = -3
Query: 685 RVSGKTSGTLPRELPPRHGPGS-APHWTDPSHPT----LLTRTYC 566
R G +P L P + G+ AP W + SHPT ++TR C
Sbjct: 573 RFEGAAGSAMPTSLVPINRCGTHAPGWMEGSHPTVAEGIVTRKVC 617
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = -3
Query: 685 RVSGKTSGTLPRELPPRHGPGS-APHWTDPSHPTL 584
R G +P L P + G+ AP W + SHPT+
Sbjct: 190 RFEGAAGSAMPTSLVPINRCGTHAPGWMEGSHPTV 224
>SB_32914| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08)
Length = 400
Score = 28.7 bits (61), Expect = 5.6
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +2
Query: 401 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCT 502
V+N G V W + S+++ WP D+Q C+
Sbjct: 102 VANTGKVVWQSPATFRSECSIKIRYWPFDVQKCS 135
>SB_31861| Best HMM Match : rve (HMM E-Value=3.6e-07)
Length = 1253
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = -2
Query: 764 RRQGSRGEQKQEHHGEHAPAASACAGARLRKDIWNIA 654
R +G E + HH A SA A + D+W++A
Sbjct: 384 RTKGQTSEGNRRHHPHIQAAVSAIADTGAQSDLWSLA 420
>SB_30974| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.9e-07)
Length = 134
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/42 (26%), Positives = 22/42 (52%)
Frame = +2
Query: 383 YALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFK 508
+ + +VS+ G W+ ++T + + +P D Q+CT K
Sbjct: 13 FKAKIKVSHTGLNMWLAPTILTTSCKINVKYFPFDQQSCTLK 54
>SB_13360| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 480
Score = 28.3 bits (60), Expect = 7.4
Identities = 15/58 (25%), Positives = 24/58 (41%)
Frame = +2
Query: 329 LWRPDVVLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCT 502
+W PD NA + + NG + + R + M L N+P D+Q C+
Sbjct: 151 IWLPDTYFNNANEYEVYIVNQLSLIKPNGDIYYSGRNKVKGACQMDLFNFPLDVQRCS 208
>SB_264| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 124
Score = 28.3 bits (60), Expect = 7.4
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 5/45 (11%)
Frame = -3
Query: 685 RVSGKTSGTLPRELPPRHGPGS-APHWTDPSHPT----LLTRTYC 566
R +G+ +P P G+ AP W D +HPT ++TR C
Sbjct: 37 RFTGQAGDAMPTSCVPEKRCGTHAPGWMDGNHPTVADGIVTRKVC 81
>SB_227| Best HMM Match : E1-E2_ATPase (HMM E-Value=0)
Length = 1003
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = -2
Query: 278 NSVVCRSNHLKICQYPHGGLGLTNVSMSQMQGQVDYDFGVG 156
N + R NH K+C+ P VS+ ++ + ++D G
Sbjct: 465 NVISFRKNHKKVCEIPFNSTNKYQVSIHEIPDEPEHDIEEG 505
>SB_37942| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.7e-05)
Length = 191
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +2
Query: 257 WIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLN 358
W + L WN ++G T V+ +W PD+VL N
Sbjct: 98 WENPFLVWNESDYGGVHTLHVTFNDVWVPDIVLYN 132
>SB_24810| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 497
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = -2
Query: 317 TPAKCCSPIPLRSNSVVCRSNHLKICQYPHG 225
T A C S SN+ VCR K+ Q HG
Sbjct: 15 TAAVCLSTTDKTSNASVCRDGRKKLAQKNHG 45
>SB_11346| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1706
Score = 27.9 bits (59), Expect = 9.8
Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Frame = -3
Query: 442 VQALYPGDGAVIRYTGAESVVPGGGCSRV*QYHVRP-PQAFRGHQPSAAAP-FPCVPTQS 269
VQ + DG + Y S VP G S + V+P QA G +P A P P T +
Sbjct: 1172 VQQVSASDGLCVTYAVGPSAVPAGIPSTLLLTGVKPVQQASSGVRPVAVTPRIPVTLTPN 1231
Query: 268 FVDP 257
+ P
Sbjct: 1232 AIRP 1235
>SB_12902| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1585
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +2
Query: 563 YTVCSSQERG--M*RICPVRCRARTVARWKLAWQCSRC 670
+ + S Q RG + + VRC V + L+W+C RC
Sbjct: 1379 HELISIQSRGSFLQTVARVRCTVTAVQKVALSWRCLRC 1416
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,875,144
Number of Sequences: 59808
Number of extensions: 630391
Number of successful extensions: 1908
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 1665
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1882
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2131907602
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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