Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021758
         (698 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    23   2.4  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    22   4.2  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    22   4.2  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   7.3  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    21   9.7  
AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450 ...    21   9.7  

>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +3

Query: 576 PRLLLRNQTASEGNRSEHEAGS 641
           PRLLLR+ TAS  N      G+
Sbjct: 327 PRLLLRHYTASSKNYRSATGGN 348


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +1

Query: 463 LPDRLGSKTRPRLQEPKAWKEGP 531
           LP  +   +RP+LQEP+  +  P
Sbjct: 86  LPFNIDCTSRPKLQEPQPSQHCP 108


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -1

Query: 668 ISSWFCGFTASSFMFTSIPFRG 603
           + SW  G  ++S +  S+PF G
Sbjct: 229 VQSWLSGGASASKVTLSVPFYG 250



 Score = 21.8 bits (44), Expect = 5.5
 Identities = 12/43 (27%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
 Frame = +2

Query: 344 PAT--VSKVFNNFHFLVALDDHADDYEDANAAWLCDSMHPYIY 466
           PAT  ++  F     ++  ++    Y D    WL D+  PY Y
Sbjct: 266 PATTGIAGPFTQSPGVLGFNEICSFYSDWTRVWLDDAQVPYKY 308


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +2

Query: 11  CENVGGRLLVRYDGCDEDLQQLWIFFSNPRLSSFG 115
           C+N GG+L VR+   +    Q +  +S+  + SFG
Sbjct: 649 CKNGGGKLPVRWMALESLTHQRYTTYSD--VWSFG 681


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = +1

Query: 319 PSGHEDGATGHRL 357
           P+GHE+  + HR+
Sbjct: 89  PAGHEEAQSPHRI 101


>AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 126

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 6/9 (66%), Positives = 6/9 (66%)
 Frame = +2

Query: 440 CDSMHPYIY 466
           CD  HPY Y
Sbjct: 117 CDKRHPYAY 125


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,325
Number of Sequences: 336
Number of extensions: 2712
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)