Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021758
         (698 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            28   0.33 
AF000953-1|AAB96576.1|  433|Anopheles gambiae carboxypeptidase A...    25   3.0  
AJ821850-1|CAH25390.1|  426|Anopheles gambiae alpha-2,6-sialyltr...    24   4.0  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    24   4.0  
AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprol...    23   9.2  
AF063021-4|AAC16248.1|   93|Anopheles gambiae unknown protein.         23   9.2  

>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 27.9 bits (59), Expect = 0.33
 Identities = 11/38 (28%), Positives = 24/38 (63%)
 Frame = +2

Query: 116 YVTNKGSPWQFKYPGKVNKFSCKNKLSAQLRQSAEEAI 229
           +VT K +P +  Y  +++KF    +++++LRQS +  +
Sbjct: 871 WVTVKAAPEKVNYFNEIDKFISSFEINSELRQSIQRGL 908


>AF000953-1|AAB96576.1|  433|Anopheles gambiae carboxypeptidase A
           protein.
          Length = 433

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +1

Query: 472 RLGSKTRPRLQEPKAWKEGPFDWDEY 549
           R   + R RL   +A  +GPFDW++Y
Sbjct: 108 RAFDEERVRLTNKRA--KGPFDWNDY 131


>AJ821850-1|CAH25390.1|  426|Anopheles gambiae
           alpha-2,6-sialyltransferase protein.
          Length = 426

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 514 AWKEGPFDWDEYLSATSSVP 573
           +WKE PF W+E  S   + P
Sbjct: 174 SWKEPPFTWNEIGSYLPTSP 193


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 14/24 (58%), Positives = 15/24 (62%)
 Frame = -1

Query: 119  RSRSCSAVG*RKISRAAVGPRRSR 48
            RSRS SA G R  SR+  G  RSR
Sbjct: 1106 RSRSGSAKGSRSRSRSGSGGSRSR 1129


>AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprolinase
            protein.
          Length = 1344

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = +3

Query: 504  RAQGVEGGPLRLGRVPVRHVIRAGPRLLLRNQTASEGNRSEHEAGSGE 647
            R  G+ GG    G+  +  +IRAGPR    ++  + G ++  + G G+
Sbjct: 1233 RPYGMAGG--MPGKPGLNLLIRAGPRGQPGHRAVNIGGKTAVQVGPGD 1278


>AF063021-4|AAC16248.1|   93|Anopheles gambiae unknown protein.
          Length = 93

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -1

Query: 365 TPWRRWPVAPSSCPEGHRA 309
           T  RRWP  P+SC    R+
Sbjct: 21  TRGRRWPRPPTSCWPSRRS 39


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 697,033
Number of Sequences: 2352
Number of extensions: 13642
Number of successful extensions: 40
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)