Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021757X
(449 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P19109 Cluster: ATP-dependent RNA helicase p62; n=9; Eu... 77 1e-13
UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=... 72 7e-12
UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;... 71 9e-12
UniRef50_Q9SWV9 Cluster: Ethylene-responsive RNA helicase; n=5; ... 64 1e-09
UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4; F... 64 1e-09
UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila melanogaster|... 60 2e-08
UniRef50_Q4TEE5 Cluster: Chromosome undetermined SCAF5464, whole... 57 2e-07
UniRef50_A2WLP5 Cluster: Putative uncharacterized protein; n=3; ... 56 5e-07
UniRef50_Q8IL14 Cluster: Helicase, truncated, putative; n=3; Euk... 55 6e-07
UniRef50_Q17KA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 52 6e-06
UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;... 49 4e-05
UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1; Ent... 49 5e-05
UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;... 48 7e-05
UniRef50_A7RY08 Cluster: Predicted protein; n=2; Eukaryota|Rep: ... 48 9e-05
UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3; Aconoidasi... 47 2e-04
UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena t... 46 4e-04
UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 44 0.002
UniRef50_UPI0000E49D13 Cluster: PREDICTED: similar to DEAD (Asp-... 40 0.033
UniRef50_UPI0000E47F75 Cluster: PREDICTED: similar to DEAD (Asp-... 40 0.033
UniRef50_Q8H0U8 Cluster: DEAD-box ATP-dependent RNA helicase 42;... 39 0.058
UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase con... 38 0.10
UniRef50_Q9SF41 Cluster: DEAD-box ATP-dependent RNA helicase 45;... 38 0.13
UniRef50_A7P8T9 Cluster: Chromosome chr3 scaffold_8, whole genom... 37 0.23
UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4; Eukaryota|... 37 0.23
UniRef50_Q93382 Cluster: Putative uncharacterized protein; n=2; ... 36 0.31
UniRef50_Q17II7 Cluster: DEAD box ATP-dependent RNA helicase; n=... 36 0.41
UniRef50_Q66HG7 Cluster: Probable ATP-dependent RNA helicase DDX... 36 0.41
UniRef50_Q86XP3 Cluster: ATP-dependent RNA helicase DDX42; n=47;... 36 0.54
UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2; ... 35 0.71
UniRef50_UPI00006CF9CE Cluster: DEAD/DEAH box helicase family pr... 35 0.94
UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;... 34 1.2
UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA hel... 34 1.6
UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-... 33 2.2
UniRef50_Q6BG49 Cluster: RNA helicase, putative; n=1; Paramecium... 33 2.2
UniRef50_Q4Z5Q6 Cluster: ATP-dependent RNA helicase, putative; n... 33 2.2
UniRef50_Q8I416 Cluster: ATP-dependent RNA helicase, putative; n... 33 2.9
UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Sl... 33 2.9
UniRef50_Q7K4L8 Cluster: LD33749p; n=1; Drosophila melanogaster|... 33 3.8
UniRef50_Q2UQR9 Cluster: Predicted protein; n=1; Aspergillus ory... 33 3.8
UniRef50_Q16T16 Cluster: DEAD box ATP-dependent RNA helicase; n=... 32 5.0
UniRef50_P21372 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 32 5.0
UniRef50_A5KB15 Cluster: ATP-dependent RNA helicase, putative; n... 32 6.6
UniRef50_A2F9J6 Cluster: Ankyrin repeat protein, putative; n=1; ... 32 6.6
>UniRef50_P19109 Cluster: ATP-dependent RNA helicase p62; n=9;
Eukaryota|Rep: ATP-dependent RNA helicase p62 -
Drosophila melanogaster (Fruit fly)
Length = 719
Score = 77.4 bits (182), Expect = 1e-13
Identities = 34/63 (53%), Positives = 42/63 (66%)
Frame = +1
Query: 253 FVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQ 432
F +L PF KNFY HP V RSPYEV+ YR E+TV G +V NPIQ F E + PDYV +
Sbjct: 236 FSNLAPFKKNFYQEHPNVANRSPYEVQRYREEQEITVRG-QVPNPIQDFSEVHLPDYVMK 294
Query: 433 GVK 441
++
Sbjct: 295 EIR 297
>UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=5;
Neoptera|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 911
Score = 71.7 bits (168), Expect = 7e-12
Identities = 30/62 (48%), Positives = 41/62 (66%)
Frame = +1
Query: 262 LQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVK 441
L+PF K+FY PHP V+ R+P EV+ +R ++TV G V +P Q FEE NFPD+V +
Sbjct: 186 LEPFEKDFYVPHPNVMARTPEEVQAFRERMQITVMGNSVPHPSQDFEEGNFPDFVMNEIN 245
Query: 442 TM 447
M
Sbjct: 246 KM 247
>UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;
n=11; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
30 - Oryza sativa subsp. japonica (Rice)
Length = 666
Score = 71.3 bits (167), Expect = 9e-12
Identities = 31/66 (46%), Positives = 41/66 (62%)
Frame = +1
Query: 241 PRLGFVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPD 420
P+ F SL PF KNFY P V S +V +YR ++TV G +V P++YF+EANFPD
Sbjct: 201 PKPDFRSLIPFEKNFYVECPAVQAMSDMDVSQYRRQRDITVEGHDVPKPVRYFQEANFPD 260
Query: 421 YVQQGV 438
Y Q +
Sbjct: 261 YCMQAI 266
>UniRef50_Q9SWV9 Cluster: Ethylene-responsive RNA helicase; n=5;
Eukaryota|Rep: Ethylene-responsive RNA helicase -
Solanum lycopersicum (Tomato) (Lycopersicon esculentum)
Length = 474
Score = 64.5 bits (150), Expect = 1e-09
Identities = 30/69 (43%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Frame = +1
Query: 238 SPR-LGFVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANF 414
SPR + L PF KNFY P++ + EVEEYR E+T+ G +V PI+ F + F
Sbjct: 44 SPRKVNLDDLPPFEKNFYVESPSIAAMTEGEVEEYRRRREITIEGRDVPKPIKSFHDVGF 103
Query: 415 PDYVQQGVK 441
PDYV Q ++
Sbjct: 104 PDYVLQEIE 112
>UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4;
Fungi/Metazoa group|Rep: ATP-dependent RNA helicase DBP2
- Gibberella zeae (Fusarium graminearum)
Length = 555
Score = 64.1 bits (149), Expect = 1e-09
Identities = 28/61 (45%), Positives = 38/61 (62%)
Frame = +1
Query: 259 SLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGV 438
SL F K+FY HP V RS +VE +R H++T++G V P++ F+EA FP YV V
Sbjct: 90 SLPKFEKSFYKEHPDVETRSDADVEAFRRKHQMTIAGSNVPKPVETFDEAGFPRYVMDEV 149
Query: 439 K 441
K
Sbjct: 150 K 150
>UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila
melanogaster|Rep: GH10652p - Drosophila melanogaster
(Fruit fly)
Length = 818
Score = 60.5 bits (140), Expect = 2e-08
Identities = 27/62 (43%), Positives = 38/62 (61%)
Frame = +1
Query: 256 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQG 435
V+L PF KNFY P +VL R+ E E + ++E+T+ G +V P FEE FPDYV
Sbjct: 112 VNLTPFRKNFYKPCDSVLARTVGETETFLTSNEITIKGDQVPTPSIEFEEGGFPDYVMNE 171
Query: 436 VK 441
++
Sbjct: 172 IR 173
>UniRef50_Q4TEE5 Cluster: Chromosome undetermined SCAF5464, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF5464,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 307
Score = 56.8 bits (131), Expect = 2e-07
Identities = 26/55 (47%), Positives = 32/55 (58%)
Frame = +1
Query: 262 LQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYV 426
L F KNFY H V + S +EVEEYR E+T+ G PI F +A+FP YV
Sbjct: 43 LPKFEKNFYTEHLEVERTSQFEVEEYRRKKEITIRGTGCPKPIIKFHQAHFPQYV 97
>UniRef50_A2WLP5 Cluster: Putative uncharacterized protein; n=3;
Magnoliophyta|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 523
Score = 55.6 bits (128), Expect = 5e-07
Identities = 25/59 (42%), Positives = 34/59 (57%)
Frame = +1
Query: 262 LQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGV 438
L F KNFY P+V + EVE YR E+TV G +V P++ F + FP+YV Q +
Sbjct: 50 LPRFEKNFYVESPSVAGMTEEEVEAYRRRREITVEGRDVPKPVREFRDVGFPEYVLQEI 108
>UniRef50_Q8IL14 Cluster: Helicase, truncated, putative; n=3;
Eukaryota|Rep: Helicase, truncated, putative -
Plasmodium falciparum (isolate 3D7)
Length = 352
Score = 55.2 bits (127), Expect = 6e-07
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Frame = +1
Query: 256 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTV-SGVEVHNPIQYFEEANFPDYVQQ 432
++L PF KNFY H + K S EV+E R+ H++T+ G V P+ + FPDYV +
Sbjct: 67 INLVPFEKNFYKEHEDISKLSTKEVKEIRDKHKITILEGENVPKPVVSINKIGFPDYVIK 126
Query: 433 GVK 441
+K
Sbjct: 127 SLK 129
>UniRef50_Q17KA8 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 718
Score = 52.0 bits (119), Expect = 6e-06
Identities = 24/54 (44%), Positives = 35/54 (64%)
Frame = +1
Query: 256 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFP 417
V L+PF K+F+ P +VL+RS EV +Y + +E+T+ G V PI F E+ FP
Sbjct: 56 VKLEPFKKDFFTPASSVLERSRTEVCQYLDKNEITMIGKNVPAPIMQFGESGFP 109
>UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DBP2 -
Encephalitozoon cuniculi
Length = 495
Score = 49.2 bits (112), Expect = 4e-05
Identities = 22/52 (42%), Positives = 30/52 (57%)
Frame = +1
Query: 271 FNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYV 426
F KNFY ++ + +P EV +R +E+ V G V +PIQ FEEA F V
Sbjct: 47 FQKNFYQEAESISRMTPSEVSSFRKTNEMIVKGTNVPHPIQKFEEAGFSSEV 98
>UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 535
Score = 48.8 bits (111), Expect = 5e-05
Identities = 23/61 (37%), Positives = 30/61 (49%)
Frame = +1
Query: 259 SLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGV 438
+L PF KNFY P R EV Y +E+ V+G E + FEE NFP + +
Sbjct: 109 TLPPFEKNFYVESPITANRDAEEVSRYLQENEIQVNGCESIKALLTFEECNFPQSILDVI 168
Query: 439 K 441
K
Sbjct: 169 K 169
>UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;
n=7; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 24 - Arabidopsis thaliana (Mouse-ear cress)
Length = 760
Score = 48.4 bits (110), Expect = 7e-05
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +1
Query: 256 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQG 435
+ +P NK+FY+ ++ + E +YR + VSG +VH P++ FE+ F +
Sbjct: 183 IDYEPINKDFYEELESISGMTEQETTDYRQRLGIRVSGFDVHRPVKTFEDCGFSSQIMSA 242
Query: 436 VK 441
+K
Sbjct: 243 IK 244
>UniRef50_A7RY08 Cluster: Predicted protein; n=2; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 518
Score = 48.0 bits (109), Expect = 9e-05
Identities = 19/64 (29%), Positives = 33/64 (51%)
Frame = +1
Query: 256 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQG 435
+ +PFNKNFY+ HP + K+S E+++ R + VSG P F F + +
Sbjct: 61 IDYKPFNKNFYEEHPEITKQSKQEIDDLRKKMGIKVSGAMPARPCISFAHFGFDEQMMAS 120
Query: 436 VKTM 447
++ +
Sbjct: 121 IRKL 124
>UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3;
Aconoidasida|Rep: RNA helicase, putative - Theileria
parva
Length = 635
Score = 47.2 bits (107), Expect = 2e-04
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +1
Query: 256 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVT-VSGVEVHNPIQYFEEANFPDYVQQ 432
+ L F KNFY HP V + E +E R E+T V G +V P+ FE +FP Y+
Sbjct: 164 IELVKFEKNFYVEHPEVKAMTQQEADEIRRAKEITVVHGRDVPKPVVKFEYTSFPRYILS 223
Query: 433 GVK 441
++
Sbjct: 224 SIE 226
>UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena
thermophila SB210|Rep: CLN3 protein - Tetrahymena
thermophila SB210
Length = 1138
Score = 46.0 bits (104), Expect = 4e-04
Identities = 20/61 (32%), Positives = 31/61 (50%)
Frame = +1
Query: 256 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQG 435
+ + F KNFY HP + K + +VE+ R E+ VSGV PI F F + + +
Sbjct: 17 IKYEAFTKNFYQEHPDITKLTEQQVEKIRKEFEIKVSGVRPPKPIVSFGHLGFDEELMRQ 76
Query: 436 V 438
+
Sbjct: 77 I 77
>UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=4;
Eukaryota|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 699
Score = 44.0 bits (99), Expect = 0.002
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +1
Query: 262 LQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYV 426
L PF K+FY P + S +V+ Y E+T+ G + P FE+ PDY+
Sbjct: 79 LTPFEKDFYKPSEFISNLSETDVKGYLAKLEITLKGRNIPRPSMEFEQGGLPDYI 133
>UniRef50_UPI0000E49D13 Cluster: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 59; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 -
Strongylocentrotus purpuratus
Length = 620
Score = 39.5 bits (88), Expect = 0.033
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +1
Query: 286 YDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 444
Y HP + + +P +V++ RN ++ V G+ + PI FE+ P +KT
Sbjct: 276 YREHPDISQLAPEQVQDIRNEVQIFVEGINIQRPILEFEQLRLPAKRMLSMKT 328
>UniRef50_UPI0000E47F75 Cluster: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 59; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 -
Strongylocentrotus purpuratus
Length = 474
Score = 39.5 bits (88), Expect = 0.033
Identities = 14/53 (26%), Positives = 29/53 (54%)
Frame = +1
Query: 286 YDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 444
Y HP + + +P +V++ RN ++ V G+ + PI FE+ P + +++
Sbjct: 326 YREHPDISQLAPEQVQDIRNEVQIFVEGINIQRPILEFEQLRLPAKIHSNLQS 378
>UniRef50_Q8H0U8 Cluster: DEAD-box ATP-dependent RNA helicase 42;
n=2; Arabidopsis thaliana|Rep: DEAD-box ATP-dependent
RNA helicase 42 - Arabidopsis thaliana (Mouse-ear cress)
Length = 1166
Score = 38.7 bits (86), Expect = 0.058
Identities = 17/64 (26%), Positives = 31/64 (48%)
Frame = +1
Query: 256 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQG 435
+ +PF KNFY + + + EV YR E+ V G +V PI+++ + +
Sbjct: 484 IEYEPFRKNFYIEVKDISRMTQEEVNTYRKELELKVHGKDVPRPIKFWHQTGLTSKILDT 543
Query: 436 VKTM 447
+K +
Sbjct: 544 MKKL 547
>UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein; n=1;
Babesia bovis|Rep: DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein - Babesia
bovis
Length = 994
Score = 37.9 bits (84), Expect = 0.10
Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +1
Query: 256 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRN-NHEVTVSGVEVHNPIQYFEEANFPD 420
+ QPF KNFY + +EVE +R N + V G PI F + PD
Sbjct: 342 IDYQPFKKNFYVQISAITAMKEHEVEAFRKANGNIRVRGKYCPRPIYNFSQCGLPD 397
>UniRef50_Q9SF41 Cluster: DEAD-box ATP-dependent RNA helicase 45;
n=15; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
45 - Arabidopsis thaliana (Mouse-ear cress)
Length = 989
Score = 37.5 bits (83), Expect = 0.13
Identities = 17/64 (26%), Positives = 30/64 (46%)
Frame = +1
Query: 256 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQG 435
+ +PF KNFY + + + V YR E+ V G +V PIQ++ + +
Sbjct: 351 IEYEPFRKNFYIEVKDISRMTQDAVNAYRKELELKVHGKDVPRPIQFWHQTGLTSKILDT 410
Query: 436 VKTM 447
+K +
Sbjct: 411 LKKL 414
>UniRef50_A7P8T9 Cluster: Chromosome chr3 scaffold_8, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr3 scaffold_8, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 971
Score = 36.7 bits (81), Expect = 0.23
Identities = 15/64 (23%), Positives = 30/64 (46%)
Frame = +1
Query: 256 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQG 435
+ +PF KNFY + +P E+ YR E+ + G +V P++ + + +
Sbjct: 439 IDYKPFRKNFYIEVKESARMTPEEIAAYRKQLELKIHGKDVPKPVKTWHQTGLTTKILDT 498
Query: 436 VKTM 447
+K +
Sbjct: 499 IKKL 502
>UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4;
Eukaryota|Rep: RNA helicase, putative - Theileria
annulata
Length = 976
Score = 36.7 bits (81), Expect = 0.23
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = +1
Query: 241 PRLGFVSLQ--PFNKNFYDPHPTVLKRSPYEVEEYRN-NHEVTVSGVEVHNPIQYFEEAN 411
PR+ ++ PF KNFY ++ +EV+ +R N + V G + PI F +
Sbjct: 315 PRVDHTKIEYLPFRKNFYVQVSSITNMGEHEVDAFRRANGNIRVYGKKCPRPISSFSQCG 374
Query: 412 FPD 420
PD
Sbjct: 375 LPD 377
>UniRef50_Q93382 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 811
Score = 36.3 bits (80), Expect = 0.31
Identities = 15/62 (24%), Positives = 30/62 (48%)
Frame = +1
Query: 256 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQG 435
+ Q FNKNFY+ H + + +V +N + V G++ P+ F +F + +
Sbjct: 220 IQYQKFNKNFYEEHEDIKRLHYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKLLMEA 279
Query: 436 VK 441
++
Sbjct: 280 IR 281
>UniRef50_Q17II7 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 639
Score = 35.9 bits (79), Expect = 0.41
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +1
Query: 310 KRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFP 417
+RS E+ E+R E+T G +V +P FEE FP
Sbjct: 60 RRSEREISEWRKTKEITTKGRDVPDPALTFEEVGFP 95
>UniRef50_Q66HG7 Cluster: Probable ATP-dependent RNA helicase DDX59;
n=4; Tetrapoda|Rep: Probable ATP-dependent RNA helicase
DDX59 - Rattus norvegicus (Rat)
Length = 589
Score = 35.9 bits (79), Expect = 0.41
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +1
Query: 286 YDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVK 441
Y HP ++ ++E + ++V G EV PI FE FP+ + Q +K
Sbjct: 168 YKEHPFIVALRDDQIETLKQQLGISVQGQEVARPIIDFEHCGFPETLNQNLK 219
>UniRef50_Q86XP3 Cluster: ATP-dependent RNA helicase DDX42; n=47;
Coelomata|Rep: ATP-dependent RNA helicase DDX42 - Homo
sapiens (Human)
Length = 938
Score = 35.5 bits (78), Expect = 0.54
Identities = 15/62 (24%), Positives = 28/62 (45%)
Frame = +1
Query: 256 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQG 435
+ PF KNFY+ H + +P ++ + R+ + VSG P F F + +
Sbjct: 208 IDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQ 267
Query: 436 VK 441
++
Sbjct: 268 IR 269
>UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 730
Score = 35.1 bits (77), Expect = 0.71
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +1
Query: 337 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVK 441
+R + +++ G V P++ +EEA FPD V Q VK
Sbjct: 283 FREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVK 317
>UniRef50_UPI00006CF9CE Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 1357
Score = 34.7 bits (76), Expect = 0.94
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +1
Query: 262 LQPFNKNFYDPHPTVLKRSPYEVEEYRNN-HEVTVSGVEVHNPIQYFEEANFPDYV 426
L+ F KNFY + + + EV+ YR N E+ V G EV PI+ + ++ D +
Sbjct: 651 LEHFQKNFYIESKEISQMTEDEVKIYRENLGEIQVKGQEVPRPIKSWLQSGLSDRI 706
>UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;
n=8; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 40 - Oryza sativa subsp. japonica (Rice)
Length = 792
Score = 34.3 bits (75), Expect = 1.2
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +1
Query: 331 EEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVK 441
E YR+ HE+TV G V PI FE FP + + ++
Sbjct: 130 EAYRHRHEITVVGDNVPAPITSFETGGFPPEILKEIQ 166
>UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA
helicase 40; n=2; core eudicotyledons|Rep: Probable
DEAD-box ATP-dependent RNA helicase 40 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 1088
Score = 33.9 bits (74), Expect = 1.6
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Frame = +1
Query: 274 NKNFYDPH----PTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFP 417
NK+ PH P V SP E+ YR HEVT +G + P FE + P
Sbjct: 394 NKSLVRPHFVTSPDVPHLSPVEI--YRKQHEVTTTGENIPAPYITFESSGLP 443
>UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-PA
- Drosophila melanogaster (Fruit fly)
Length = 1224
Score = 33.5 bits (73), Expect = 2.2
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +1
Query: 223 RSEHASPRLGFVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQ 393
R E A V+ PF KNFY P + + + +VE+YR++ E + V G PI+
Sbjct: 453 RKELAKIDHSSVTYAPFRKNFYVEVPELTRMTAADVEKYRSDLEGIQVKGKGCPKPIK 510
>UniRef50_Q6BG49 Cluster: RNA helicase, putative; n=1; Paramecium
tetraurelia|Rep: RNA helicase, putative - Paramecium
tetraurelia
Length = 1157
Score = 33.5 bits (73), Expect = 2.2
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +1
Query: 256 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNN-HEVTVSGVEVHNPIQYFEEANFPDYV 426
+ QPF K+FY +++ +P E ++ R ++ V G +V PIQ + + D V
Sbjct: 457 IDYQPFRKDFYREVSELVQMTPEEAKKLRQQLGDIKVRGKDVPKPIQNWYQCGLNDRV 514
>UniRef50_Q4Z5Q6 Cluster: ATP-dependent RNA helicase, putative; n=4;
Plasmodium (Vinckeia)|Rep: ATP-dependent RNA helicase,
putative - Plasmodium berghei
Length = 1312
Score = 33.5 bits (73), Expect = 2.2
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +1
Query: 268 PFNKNFYDPHPTVLKRSPYEVEEYR-NNHEVTVSGVEVHNPIQYFEEANFP 417
P KN Y + + +VE +R NN + V G PIQYF + P
Sbjct: 527 PIKKNVYVQVSEITNMTEKDVEMFRKNNGNIVVRGKNCPRPIQYFYQCGLP 577
>UniRef50_Q8I416 Cluster: ATP-dependent RNA helicase, putative; n=2;
Plasmodium|Rep: ATP-dependent RNA helicase, putative -
Plasmodium falciparum (isolate 3D7)
Length = 1490
Score = 33.1 bits (72), Expect = 2.9
Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Frame = +1
Query: 268 PFNKNFYDPHPTVLKRSPYEVEEYR-NNHEVTVSGVEVHNPIQYFEEANFPDYVQQ 432
P KN Y + +V+ +R NN + V G P+QYF + P + Q
Sbjct: 681 PIKKNIYVQVKEITNMKDSDVDMFRKNNGNIIVRGKNCPRPVQYFYQCGLPSKILQ 736
>UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Slime
mold). Putative RNA helicase; n=3; Dictyostelium
discoideum|Rep: Similar to Dictyostelium discoideum
(Slime mold). Putative RNA helicase - Dictyostelium
discoideum (Slime mold)
Length = 1151
Score = 33.1 bits (72), Expect = 2.9
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +1
Query: 271 FNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYV 426
F KNFY P + + EV ++R+ V ++G + PIQ + +A + V
Sbjct: 469 FQKNFYIEVPVLANMTETEVLDFRSELGVKITGKDCPKPIQSWAQAGLTEKV 520
>UniRef50_Q7K4L8 Cluster: LD33749p; n=1; Drosophila
melanogaster|Rep: LD33749p - Drosophila melanogaster
(Fruit fly)
Length = 703
Score = 32.7 bits (71), Expect = 3.8
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 13/71 (18%)
Frame = +1
Query: 268 PFNKNFYDPHPTVLKRSPYEVEEYR-NNHEVTVSGV----------EVHNPIQYFEE--A 408
P KNFY P V + E+E R N+++TVS V + NP+ FE+ A
Sbjct: 230 PLTKNFYKEAPEVANLTKSEIERIREENNKITVSYVFEPKEGETSPPIPNPVWTFEQCFA 289
Query: 409 NFPDYVQQGVK 441
+PD +++ K
Sbjct: 290 EYPDMLEEITK 300
>UniRef50_Q2UQR9 Cluster: Predicted protein; n=1; Aspergillus
oryzae|Rep: Predicted protein - Aspergillus oryzae
Length = 488
Score = 32.7 bits (71), Expect = 3.8
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +1
Query: 250 GFVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVH 381
G V+L F NF+ HP +L RS Y E Y + ++ V V+ H
Sbjct: 123 GLVNL--FYANFHSAHPILLPRSMYNEETYPESLQLAVQFVDSH 164
>UniRef50_Q16T16 Cluster: DEAD box ATP-dependent RNA helicase; n=7;
Bilateria|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 741
Score = 32.3 bits (70), Expect = 5.0
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 12/64 (18%)
Frame = +1
Query: 277 KNFYDPHPTVLKRSPYEVEEYR-NNHEVTVS---------GVEVHNPIQYFEEA--NFPD 420
KNFY+ P V +P EV E+R N+ + V + NP+Q FE+A +P+
Sbjct: 274 KNFYNELPEVANMTPEEVSEFRCANNNIVVDRTFKDADKPSAPIPNPVQTFEQAFHEYPE 333
Query: 421 YVQQ 432
+++
Sbjct: 334 LLEE 337
>UniRef50_P21372 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=2; Saccharomyces cerevisiae|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 849
Score = 32.3 bits (70), Expect = 5.0
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +1
Query: 262 LQPFNKNFYDPHPTVLKRSPYEVEEYR-NNHEVTVSGVEVHNPI 390
L+PF KNFY TV S EVEE R + + + G P+
Sbjct: 211 LEPFQKNFYIESETVSSMSEMEVEELRLSLDNIKIKGTGCPKPV 254
>UniRef50_A5KB15 Cluster: ATP-dependent RNA helicase, putative; n=1;
Plasmodium vivax|Rep: ATP-dependent RNA helicase,
putative - Plasmodium vivax
Length = 1341
Score = 31.9 bits (69), Expect = 6.6
Identities = 16/58 (27%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Frame = +1
Query: 256 VSLQPFNKNFYDPHPTVLKRSPYEVEEYR-NNHEVTVSGVEVHNPIQYFEEANFPDYV 426
V P KN Y + +V+ +R NN + V G P+QYF + P +
Sbjct: 623 VEYLPIKKNIYVQVSEITNMKESDVDLFRKNNGNIIVRGKNCPRPVQYFYQCGLPSKI 680
>UniRef50_A2F9J6 Cluster: Ankyrin repeat protein, putative; n=1;
Trichomonas vaginalis G3|Rep: Ankyrin repeat protein,
putative - Trichomonas vaginalis G3
Length = 516
Score = 31.9 bits (69), Expect = 6.6
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Frame = +1
Query: 253 FVSLQPFNKNFYDPHPTVLK---RSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDY 423
++ Q ++K F H V+K R P +V E NN + + N I + E+ F +Y
Sbjct: 96 YIIYQEYHKFFNPEHQRVIKTNFRFPIDVHEDNNNIYKVIMNDDKENFIFFIEQDEFDEY 155
Query: 424 VQ 429
+Q
Sbjct: 156 MQ 157
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 385,319,233
Number of Sequences: 1657284
Number of extensions: 6476002
Number of successful extensions: 16887
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 16583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16884
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 23604537544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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