Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021757X
         (449 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   7.1  
L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protei...    20   9.4  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    20   9.4  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    20   9.4  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    20   9.4  

>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory
          receptor candidate 50 protein.
          Length = 350

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 97 AIIPVTRHD*FSDLVEDVYL 38
          A++PV +H     LV  VYL
Sbjct: 18 ALLPVKKHHRLEKLVPCVYL 37


>L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protein
           protein.
          Length = 74

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 5/10 (50%), Positives = 10/10 (100%)
 Frame = +2

Query: 302 QFSKDHHMKS 331
           +F++DHH+K+
Sbjct: 18  RFTRDHHLKT 27


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -2

Query: 436 HLVAHNQENLLLQSIE*DYEPQRHLQL 356
           HL+ H Q +L+ QSI     P  H +L
Sbjct: 134 HLLGHLQTDLMGQSIFNITSPDDHDRL 160


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -3

Query: 384 IMNLNATYSYLVIISVLFDFIW 319
           I  LNATY  ++++     FI+
Sbjct: 226 IKQLNATYGLILLLMFTSHFIF 247


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 5/10 (50%), Positives = 10/10 (100%)
 Frame = +2

Query: 302 QFSKDHHMKS 331
           +F++DHH+K+
Sbjct: 171 RFTRDHHLKT 180


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,368
Number of Sequences: 336
Number of extensions: 1766
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10195961
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)