Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021757X
         (449 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein...    25   1.6  
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    23   3.8  
AF043440-1|AAC05665.1|  234|Anopheles gambiae putative pupal-spe...    23   5.0  
AY873992-1|AAW71999.1|  259|Anopheles gambiae nanos protein.           22   8.7  

>CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein
           protein.
          Length = 415

 Score = 24.6 bits (51), Expect = 1.6
 Identities = 16/71 (22%), Positives = 27/71 (38%)
 Frame = +1

Query: 223 RSEHASPRLGFVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFE 402
           +SE     +   +++P     Y+P P VL  +   V E   + ++ +    V       E
Sbjct: 96  KSEDVESSIPVSTIEPNLVEVYEPPPVVLIDTGNNVVEVNTDDQIVLEDGSVEGESNEQE 155

Query: 403 EANFPDYVQQG 435
           EA    Y   G
Sbjct: 156 EAQIDVYHVDG 166


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
            protein.
          Length = 988

 Score = 23.4 bits (48), Expect = 3.8
 Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 3/28 (10%)
 Frame = -1

Query: 281  FLLKGWSETNPNL---GDACSDLQRILF 207
            F+ KG  E +PN    GDA  D++ +LF
Sbjct: 926  FVEKGILEGSPNCPECGDAVEDVEHVLF 953


>AF043440-1|AAC05665.1|  234|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 234

 Score = 23.0 bits (47), Expect = 5.0
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +1

Query: 304 VLKRSPYEVEEYRNNHEVTVSGVEVHNPIQY 396
           V++R P  V+  +  H+V    V VH P+ +
Sbjct: 139 VVRREPSAVKIAQPVHKVIAQPVHVHAPVAH 169


>AY873992-1|AAW71999.1|  259|Anopheles gambiae nanos protein.
          Length = 259

 Score = 22.2 bits (45), Expect = 8.7
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = +1

Query: 271 FNKNFYDPHPTVLKRSPYEVE 333
           F KN+ D  P ++ +SPY+++
Sbjct: 38  FLKNYPDFIPMLIGQSPYKID 58


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 409,375
Number of Sequences: 2352
Number of extensions: 7200
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 38268990
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)