Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021757X
         (449 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81555-7|CAB04518.1|  561|Caenorhabditis elegans Hypothetical pr...    43   9e-05
Z81449-4|CAB03765.1|  811|Caenorhabditis elegans Hypothetical pr...    36   0.010
U13070-1|AAK67224.1|  730|Caenorhabditis elegans Hypothetical pr...    35   0.024
AF045641-1|AAK68386.1|  970|Caenorhabditis elegans Hypothetical ...    30   0.68 
Z73098-7|CAA97341.1| 1215|Caenorhabditis elegans Hypothetical pr...    27   6.3  
AF016677-4|AAL11109.2|  304|Caenorhabditis elegans Hypothetical ...    27   6.3  
AL032657-2|CAA21738.1|  368|Caenorhabditis elegans Hypothetical ...    27   8.3  
AF016427-5|AAB65357.2|  273|Caenorhabditis elegans Ground-like (...    27   8.3  

>Z81555-7|CAB04518.1|  561|Caenorhabditis elegans Hypothetical
           protein F58E10.3a protein.
          Length = 561

 Score = 43.2 bits (97), Expect = 9e-05
 Identities = 18/58 (31%), Positives = 33/58 (56%)
 Frame = +1

Query: 259 SLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQ 432
           +L P  K+FY  +  V +R  YE++++ + ++VT+ G  V  P+  F EA  P  + +
Sbjct: 86  NLTPIEKDFYHENAAVSRREQYEIDQWVSANQVTLEGRGVPRPVFEFNEAPLPGQIHE 143


>Z81449-4|CAB03765.1|  811|Caenorhabditis elegans Hypothetical
           protein C46F11.4 protein.
          Length = 811

 Score = 36.3 bits (80), Expect = 0.010
 Identities = 15/62 (24%), Positives = 30/62 (48%)
 Frame = +1

Query: 256 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQG 435
           +  Q FNKNFY+ H  + +    +V   +N   + V G++   P+  F   +F   + + 
Sbjct: 220 IQYQKFNKNFYEEHEDIKRLHYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKLLMEA 279

Query: 436 VK 441
           ++
Sbjct: 280 IR 281


>U13070-1|AAK67224.1|  730|Caenorhabditis elegans Hypothetical
           protein F01F1.7 protein.
          Length = 730

 Score = 35.1 bits (77), Expect = 0.024
 Identities = 14/35 (40%), Positives = 22/35 (62%)
 Frame = +1

Query: 337 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVK 441
           +R +  +++ G  V  P++ +EEA FPD V Q VK
Sbjct: 283 FREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVK 317


>AF045641-1|AAK68386.1|  970|Caenorhabditis elegans Hypothetical
           protein F53H1.1 protein.
          Length = 970

 Score = 30.3 bits (65), Expect = 0.68
 Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
 Frame = +1

Query: 211 RILWRSEHASPRLGFVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNN-HEVTVSGVEVHNP 387
           R+L +++H+      V  + F KNFY     + + +  EV+ YR     +TV G++   P
Sbjct: 248 RMLAQTDHSK-----VYYRKFKKNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKP 302

Query: 388 IQ 393
           I+
Sbjct: 303 IK 304


>Z73098-7|CAA97341.1| 1215|Caenorhabditis elegans Hypothetical
           protein T21C9.6 protein.
          Length = 1215

 Score = 27.1 bits (57), Expect = 6.3
 Identities = 13/43 (30%), Positives = 23/43 (53%)
 Frame = +1

Query: 262 LQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPI 390
           L+ FN+  Y+  PT L  +   +E+YR  + +   G+   NP+
Sbjct: 170 LKSFNE-IYNDKPTALIENLKTIEKYRKGNVLNQMGLRHRNPL 211


>AF016677-4|AAL11109.2|  304|Caenorhabditis elegans Hypothetical
           protein ZK1240.3 protein.
          Length = 304

 Score = 27.1 bits (57), Expect = 6.3
 Identities = 17/72 (23%), Positives = 33/72 (45%)
 Frame = +1

Query: 205 EKRILWRSEHASPRLGFVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHN 384
           E+ I+ + E +S +   ++L+  NK          K    +     N+ ++ ++GVE+  
Sbjct: 201 EEAIIEKLELSSSKTYELNLEKENKLLQSQEELAKKMERMKTRINLNDTQLFIAGVEMRG 260

Query: 385 PIQYFEEANFPD 420
           P  Y+E    PD
Sbjct: 261 PTWYYEN-ELPD 271


>AL032657-2|CAA21738.1|  368|Caenorhabditis elegans Hypothetical
           protein Y47H9C.2 protein.
          Length = 368

 Score = 26.6 bits (56), Expect = 8.3
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 277 KNFYDPHPTVLKRSPYEVEEYRNNH 351
           + + DPHPT+  R P + E+   NH
Sbjct: 344 RGYLDPHPTIEIRVPKKSEKSIENH 368


>AF016427-5|AAB65357.2|  273|Caenorhabditis elegans Ground-like (grd
           related) protein13 protein.
          Length = 273

 Score = 26.6 bits (56), Expect = 8.3
 Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = +1

Query: 265 QPFNK-NFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQ 393
           QP++  +F  P PT++++ PY    Y   H + +   + HN  Q
Sbjct: 63  QPYSPVSFRPPPPTIIQQQPY----YSVPHPIPIQTQQFHNSYQ 102


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,987,742
Number of Sequences: 27780
Number of extensions: 158593
Number of successful extensions: 430
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 424
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 430
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 788595652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)