Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021756
(758 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P05388 Cluster: 60S acidic ribosomal protein P0; n=171;... 141 1e-32
UniRef50_Q9PV90 Cluster: 60S acidic ribosomal protein P0; n=11; ... 140 3e-32
UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3; M... 133 4e-30
UniRef50_O04204 Cluster: 60S acidic ribosomal protein P0-1; n=27... 107 4e-22
UniRef50_UPI0000499842 Cluster: 60S acidic ribosomal protein P0;... 106 5e-22
UniRef50_P57691 Cluster: 60S acidic ribosomal protein P0-3; n=10... 103 4e-21
UniRef50_P22685 Cluster: 60S acidic ribosomal protein P0; n=2; D... 99 1e-19
UniRef50_A2EES5 Cluster: 60S acidic ribosomal protein P0; n=6; T... 89 1e-16
UniRef50_Q9U7P1 Cluster: 60S acidic ribosomal protein P0; n=1; E... 89 1e-16
UniRef50_Q94660 Cluster: 60S acidic ribosomal protein P0; n=14; ... 88 2e-16
UniRef50_Q8SRJ7 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P0; n=1; E... 79 9e-14
UniRef50_O94085 Cluster: Putative uncharacterized protein YLR339... 79 9e-14
UniRef50_Q52H32 Cluster: 60S acidic ribosomal protein P0; n=4; E... 79 2e-13
UniRef50_P26796 Cluster: 60S acidic ribosomal protein P0; n=12; ... 78 2e-13
UniRef50_Q16RH9 Cluster: Temporarily assignedprotein name protei... 76 8e-13
UniRef50_A0DDF2 Cluster: 60S acidic ribosomal protein P0; n=6; P... 75 1e-12
UniRef50_Q22HK6 Cluster: 60S acidic ribosomal protein P0; n=2; T... 75 3e-12
UniRef50_Q7QU12 Cluster: 60S acidic ribosomal protein P0; n=1; G... 69 2e-10
UniRef50_A5BWW8 Cluster: Putative uncharacterized protein; n=1; ... 67 4e-10
UniRef50_A7Q681 Cluster: Chromosome undetermined scaffold_55, wh... 64 3e-09
UniRef50_Q6CW90 Cluster: Similarities with sp|O94085 Saccharomyc... 64 5e-09
UniRef50_Q8TX50 Cluster: Acidic ribosomal protein P0 homolog; n=... 63 8e-09
UniRef50_A5C7V3 Cluster: Putative uncharacterized protein; n=2; ... 61 3e-08
UniRef50_Q98S65 Cluster: 60S acidic ribosomal protein P0; n=1; G... 59 1e-07
UniRef50_O74109 Cluster: Acidic ribosomal protein P0 homolog; n=... 55 2e-06
UniRef50_A7DRL3 Cluster: Ribosomal protein L10; n=1; Candidatus ... 54 4e-06
UniRef50_A0RX06 Cluster: Ribosomal protein L10; n=1; Cenarchaeum... 52 1e-05
UniRef50_A3H9G5 Cluster: Ribosomal protein L10; n=1; Caldivirga ... 50 6e-05
UniRef50_Q8ZTT3 Cluster: Acidic ribosomal protein P0 homolog; n=... 50 8e-05
UniRef50_Q2NEW2 Cluster: 50S ribosomal protein L10P; n=1; Methan... 48 2e-04
UniRef50_A1RWQ2 Cluster: Ribosomal protein L10; n=1; Thermofilum... 48 3e-04
UniRef50_Q3LWA7 Cluster: Ribosomal protein L10; n=1; Bigelowiell... 47 4e-04
UniRef50_O28781 Cluster: Acidic ribosomal protein P0 homolog; n=... 47 6e-04
UniRef50_Q8PY51 Cluster: Acidic ribosomal protein P0 homolog; n=... 44 0.005
UniRef50_Q7R447 Cluster: GLP_254_32992_33747; n=1; Giardia lambl... 43 0.009
UniRef50_A7PSP2 Cluster: Chromosome chr6 scaffold_28, whole geno... 42 0.013
UniRef50_P13553 Cluster: Acidic ribosomal protein P0 homolog; n=... 42 0.013
UniRef50_UPI00015BB116 Cluster: LSU ribosomal protein L10P; n=1;... 42 0.017
UniRef50_P15826 Cluster: Acidic ribosomal protein P0 homolog; n=... 41 0.029
UniRef50_Q9Y9W8 Cluster: Acidic ribosomal protein P0 homolog; n=... 40 0.088
UniRef50_A3DNI2 Cluster: Ribosomal protein L10; n=1; Staphylothe... 39 0.12
UniRef50_Q2Y4X9 Cluster: Acidic ribosomal protein P0; n=1; uncul... 38 0.27
UniRef50_A3CSJ7 Cluster: Ribosomal protein L10; n=4; Methanomicr... 38 0.27
UniRef50_Q7S302 Cluster: mRNA turnover protein 4 homolog; n=17; ... 38 0.27
UniRef50_P96039 Cluster: Acidic ribosomal protein P0 homolog; n=... 38 0.36
UniRef50_Q74N82 Cluster: NEQ091; n=1; Nanoarchaeum equitans|Rep:... 37 0.47
UniRef50_Q4FX48 Cluster: Putative uncharacterized protein; n=3; ... 36 0.82
UniRef50_A4CNC1 Cluster: Putative uncharacterized protein; n=2; ... 36 1.1
UniRef50_A0YSL9 Cluster: Putative uncharacterized protein; n=1; ... 35 2.5
UniRef50_Q0W051 Cluster: 50S ribosomal protein L10E; n=1; uncult... 35 2.5
UniRef50_A0B921 Cluster: Ribosomal protein L10; n=1; Methanosaet... 34 3.3
UniRef50_Q9LLN7 Cluster: Leucine rich repeat containing protein ... 34 4.4
UniRef50_Q9C548 Cluster: Myb-family transcription factor, putati... 34 4.4
UniRef50_Q5BY73 Cluster: SJCHGC01801 protein; n=1; Schistosoma j... 34 4.4
UniRef50_A7KAI1 Cluster: Atg2p; n=1; Pichia angusta|Rep: Atg2p -... 34 4.4
UniRef50_UPI00006D0E10 Cluster: hypothetical protein TTHERM_0007... 33 5.8
UniRef50_A0CZG7 Cluster: Chromosome undetermined scaffold_32, wh... 33 5.8
UniRef50_UPI00015B4FCF Cluster: PREDICTED: hypothetical protein;... 33 7.7
UniRef50_Q7K1Q7 Cluster: LD47064p; n=7; Endopterygota|Rep: LD470... 33 7.7
UniRef50_Q9USZ6 Cluster: mRNA turnover protein 4 homolog; n=1; S... 33 7.7
>UniRef50_P05388 Cluster: 60S acidic ribosomal protein P0; n=171;
Eukaryota|Rep: 60S acidic ribosomal protein P0 - Homo
sapiens (Human)
Length = 317
Score = 141 bits (342), Expect = 1e-32
Identities = 68/94 (72%), Positives = 75/94 (79%)
Frame = +3
Query: 231 GKKHNDAQAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGA 410
GK +AI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GA
Sbjct: 56 GKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGA 115
Query: 411 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISR 512
IAP V +PA NTGLGPEKTSFFQAL I TKISR
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISR 149
Score = 120 bits (290), Expect = 3e-26
Identities = 54/63 (85%), Positives = 60/63 (95%)
Frame = +1
Query: 67 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRFSLRGSSIVLMGKNTM 246
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 247 MRK 255
MRK
Sbjct: 61 MRK 63
Score = 119 bits (287), Expect = 7e-26
Identities = 54/83 (65%), Positives = 71/83 (85%)
Frame = +2
Query: 509 KGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKP 688
+GTIEI++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI
Sbjct: 149 RGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITE 208
Query: 689 EDLRAKFQAGVANVAALSLAIGY 757
E L ++F GV NVA++ L IGY
Sbjct: 209 ETLHSRFLEGVRNVASVCLQIGY 231
>UniRef50_Q9PV90 Cluster: 60S acidic ribosomal protein P0; n=11;
Eukaryota|Rep: 60S acidic ribosomal protein P0 - Danio
rerio (Zebrafish) (Brachydanio rerio)
Length = 319
Score = 140 bits (339), Expect = 3e-32
Identities = 68/94 (72%), Positives = 75/94 (79%)
Frame = +3
Query: 231 GKKHNDAQAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGA 410
GK +AI+ HL+NNPALE+LLPHI+GNVGFVFT+ DL EVRD LL NKV A AR GA
Sbjct: 56 GKNTMMRKAIRGHLENNPALERLLPHIRGNVGFVFTKEDLTEVRDLLLANKVPAAARAGA 115
Query: 411 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISR 512
IAP V +PA NTGLGPEKTSFFQAL I TKISR
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISR 149
Score = 117 bits (282), Expect = 3e-25
Identities = 53/86 (61%), Positives = 72/86 (83%), Gaps = 3/86 (3%)
Frame = +2
Query: 509 KGTIEIINDVHILKPGDKVGASEATLLNMLN---ISPFSYGLVVKQVYDSGTIFAPEILD 679
+GTIEI++DV ++KPGDKVGASEATLLNMLN ISPFSYGL+++QVYD+G++++PE+LD
Sbjct: 149 RGTIEILSDVQLIKPGDKVGASEATLLNMLNMLNISPFSYGLIIQQVYDNGSVYSPEVLD 208
Query: 680 IKPEDLRAKFQAGVANVAALSLAIGY 757
I + L +F GV N+A++ L IGY
Sbjct: 209 ITEDALHKRFLKGVRNIASVCLQIGY 234
Score = 116 bits (280), Expect = 5e-25
Identities = 52/63 (82%), Positives = 59/63 (93%)
Frame = +1
Query: 67 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRFSLRGSSIVLMGKNTM 246
M RED+ATWKSNYF+KIIQLLD++PKCFIVGADNVGS+QMQ IR SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDFPKCFIVGADNVGSKQMQTIRLSLRGKAVVLMGKNTM 60
Query: 247 MRK 255
MRK
Sbjct: 61 MRK 63
>UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3;
Metazoa|Rep: 60S acidic ribosomal protein P0 - Suberites
domuncula (Sponge)
Length = 313
Score = 133 bits (322), Expect = 4e-30
Identities = 60/94 (63%), Positives = 76/94 (80%)
Frame = +3
Query: 231 GKKHNDAQAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGA 410
GK +A++ HL+ NP LEK+LPH+KGN+GFVFT D+V++R+ +L N+V APA+ GA
Sbjct: 56 GKNTTIRKALRGHLEQNPNLEKVLPHVKGNIGFVFTHEDMVDIREIMLSNQVGAPAKAGA 115
Query: 411 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISR 512
IAP+ V +PA NTGLGPEKTSFFQALSI TKISR
Sbjct: 116 IAPVDVFVPASNTGLGPEKTSFFQALSIATKISR 149
Score = 117 bits (282), Expect = 3e-25
Identities = 54/83 (65%), Positives = 70/83 (84%)
Frame = +2
Query: 509 KGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKP 688
+GTIEI+++VH++K G+KVGASEATLL ML I PF+YGL + QVYDSG++FAP ILDI
Sbjct: 149 RGTIEILSEVHLIKIGEKVGASEATLLQMLKIFPFTYGLKIVQVYDSGSVFAPSILDITE 208
Query: 689 EDLRAKFQAGVANVAALSLAIGY 757
+DL +F +G+ANVAA+SL IGY
Sbjct: 209 DDLIKQFMSGLANVAAVSLQIGY 231
Score = 93.5 bits (222), Expect = 5e-18
Identities = 40/63 (63%), Positives = 50/63 (79%)
Frame = +1
Query: 67 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRFSLRGSSIVLMGKNTM 246
MGREDKA WKSNY ++++ L DEY + +V DNVGS+QMQQIR SLRG + +LMGKNT
Sbjct: 1 MGREDKAAWKSNYVMRLLSLFDEYKRVLLVNVDNVGSKQMQQIRISLRGKATILMGKNTT 60
Query: 247 MRK 255
+RK
Sbjct: 61 IRK 63
>UniRef50_O04204 Cluster: 60S acidic ribosomal protein P0-1; n=27;
Eukaryota|Rep: 60S acidic ribosomal protein P0-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 317
Score = 107 bits (256), Expect = 4e-22
Identities = 50/83 (60%), Positives = 64/83 (77%)
Frame = +2
Query: 509 KGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKP 688
KGT+EII V ++K GDKVG+SEA LL L I PFSYGLVV+ VYD+G++F PE+L++
Sbjct: 152 KGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVESVYDNGSVFNPEVLNLTE 211
Query: 689 EDLRAKFQAGVANVAALSLAIGY 757
+DL KF AGV+ + ALSLAI Y
Sbjct: 212 DDLVEKFAAGVSMITALSLAISY 234
Score = 96.7 bits (230), Expect = 5e-19
Identities = 47/96 (48%), Positives = 66/96 (68%), Gaps = 2/96 (2%)
Frame = +3
Query: 231 GKKHNDAQAIKDHLDN--NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARP 404
GK ++++ H D N A LLP ++GNVG +FT+GDL EV +++ + KV APAR
Sbjct: 57 GKNTMMKRSVRIHADKTGNQAFLSLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARV 116
Query: 405 GAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISR 512
G +AP+ VV+ NTGL P +TSFFQ L+IPTKI++
Sbjct: 117 GLVAPIDVVVQPGNTGLDPSQTSFFQVLNIPTKINK 152
Score = 69.7 bits (163), Expect = 7e-11
Identities = 34/58 (58%), Positives = 42/58 (72%)
Frame = +1
Query: 82 KATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRFSLRGSSIVLMGKNTMMRK 255
KA K Y K+ QLL+EY + +V ADNVGS Q+Q IR LRG S+VLMGKNTMM++
Sbjct: 7 KAEKKIVYDSKLCQLLNEYSQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMMKR 64
>UniRef50_UPI0000499842 Cluster: 60S acidic ribosomal protein P0;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: 60S acidic
ribosomal protein P0 - Entamoeba histolytica HM-1:IMSS
Length = 316
Score = 106 bits (255), Expect = 5e-22
Identities = 49/94 (52%), Positives = 69/94 (73%)
Frame = +3
Query: 231 GKKHNDAQAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGA 410
GK +AIK+ + P LE+LLPHIKGNVGF+FT+GDL +++ KL E K +PA+ G
Sbjct: 63 GKNTLIRKAIKNQAETQPELEELLPHIKGNVGFIFTKGDLYQLKAKLTELKAPSPAKAGV 122
Query: 411 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISR 512
IAP V++PA +TGL P +T+F QAL+I +KI++
Sbjct: 123 IAPNDVIVPAGDTGLDPTQTNFVQALNIASKITK 156
Score = 79.8 bits (188), Expect = 7e-14
Identities = 37/80 (46%), Positives = 52/80 (65%)
Frame = +2
Query: 509 KGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKP 688
KG IEI ++ ++K G+KVG S+A LL L I+PF YG V+ VYD+G ++ + LD+
Sbjct: 156 KGQIEITSETLLIKEGEKVGVSQAVLLQKLKINPFKYGAVIDVVYDNGIVYDAKALDLTE 215
Query: 689 EDLRAKFQAGVANVAALSLA 748
D+ KFQ GV A+SLA
Sbjct: 216 SDIVKKFQEGVQAATAISLA 235
Score = 64.1 bits (149), Expect = 4e-09
Identities = 34/74 (45%), Positives = 45/74 (60%)
Frame = +1
Query: 67 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRFSLRGSSIVLMGKNTM 246
+ +E K K Y VK+ +LL+EY + +V DNVGS Q Q IR LRG+ +MGKNT+
Sbjct: 8 LSKEQKKAKKEAYLVKMKKLLEEYKQVVVVKCDNVGSSQFQTIRKELRGTCEFVMGKNTL 67
Query: 247 MRKPSKTTWTTIQP 288
+RK K T QP
Sbjct: 68 IRKAIKNQAET-QP 80
>UniRef50_P57691 Cluster: 60S acidic ribosomal protein P0-3; n=10;
Eukaryota|Rep: 60S acidic ribosomal protein P0-3 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 323
Score = 103 bits (248), Expect = 4e-21
Identities = 46/83 (55%), Positives = 64/83 (77%)
Frame = +2
Query: 509 KGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKP 688
KGT+EII V ++K GDKVG+SEA LL L I PFSYGLVV+ VYD+G++F+PE+LD+
Sbjct: 151 KGTVEIITPVELIKQGDKVGSSEAALLAKLGIRPFSYGLVVQSVYDNGSVFSPEVLDLTE 210
Query: 689 EDLRAKFQAGVANVAALSLAIGY 757
+ L KF +G++ V +L+LA+ Y
Sbjct: 211 DQLVEKFASGISMVTSLALAVSY 233
Score = 97.9 bits (233), Expect = 2e-19
Identities = 47/96 (48%), Positives = 68/96 (70%), Gaps = 2/96 (2%)
Frame = +3
Query: 231 GKKHNDAQAIKDHLDN--NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARP 404
GK ++++ H +N N A+ LLP ++GNVG +FT+GDL EV +++ + KV APAR
Sbjct: 56 GKNTMMKRSVRIHSENSGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARV 115
Query: 405 GAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISR 512
G +AP+ VV+ NTGL P +TSFFQ L+IPTKI++
Sbjct: 116 GLVAPIDVVVQPGNTGLDPSQTSFFQVLNIPTKINK 151
Score = 72.9 bits (171), Expect = 8e-12
Identities = 35/63 (55%), Positives = 44/63 (69%)
Frame = +1
Query: 67 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRFSLRGSSIVLMGKNTM 246
M + KA K Y K+ QL+DEY + +V ADNVGS Q+Q IR LRG S+VLMGKNTM
Sbjct: 1 MVKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTM 60
Query: 247 MRK 255
M++
Sbjct: 61 MKR 63
>UniRef50_P22685 Cluster: 60S acidic ribosomal protein P0; n=2;
Dictyostelium discoideum|Rep: 60S acidic ribosomal
protein P0 - Dictyostelium discoideum (Slime mold)
Length = 305
Score = 99.1 bits (236), Expect = 1e-19
Identities = 47/83 (56%), Positives = 62/83 (74%)
Frame = +2
Query: 509 KGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKP 688
+G I+I+N+VHI+K G KVGASEATLL LNI PF+YGL K +YD+G ++P I +
Sbjct: 148 RGQIDIVNEVHIIKTGQKVGASEATLLQKLNIKPFTYGLEPKIIYDAGACYSPSISE--- 204
Query: 689 EDLRAKFQAGVANVAALSLAIGY 757
EDL KF+ G+ N+AA+SL IGY
Sbjct: 205 EDLINKFKQGIFNIAAISLEIGY 227
Score = 75.4 bits (177), Expect = 1e-12
Identities = 38/94 (40%), Positives = 56/94 (59%)
Frame = +3
Query: 231 GKKHNDAQAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGA 410
GKK + I+D D+ P L+ L ++K N +F + ++ EV+ + +V APA+ G
Sbjct: 55 GKKTMIRKVIRDLADSKPELDALNTYLKQNTCIIFCKDNIAEVKRVINTQRVGAPAKAGV 114
Query: 411 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISR 512
AP V+IPA TG+ P +TSF Q L I TKI+R
Sbjct: 115 FAPNDVIIPAGPTGMEPTQTSFLQDLKIATKINR 148
Score = 52.0 bits (119), Expect = 2e-05
Identities = 26/54 (48%), Positives = 33/54 (61%)
Frame = +1
Query: 94 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRFSLRGSSIVLMGKNTMMRK 255
K + K +L Y K + AD VGS Q+Q+IR S+RG VLMGK TM+RK
Sbjct: 9 KKLFIEKATKLFTTYDKMIVAEADFVGSSQLQKIRKSIRGIGAVLMGKKTMIRK 62
>UniRef50_A2EES5 Cluster: 60S acidic ribosomal protein P0; n=6;
Trichomonas vaginalis G3|Rep: 60S acidic ribosomal
protein P0 - Trichomonas vaginalis G3
Length = 318
Score = 89.0 bits (211), Expect = 1e-16
Identities = 42/84 (50%), Positives = 56/84 (66%)
Frame = +2
Query: 506 FKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIK 685
FKGTIEI + ++ G KVGASEA +LN+L I PF Y L ++ +YD G ++ P IL I
Sbjct: 150 FKGTIEITGEKQLIWEGQKVGASEANILNILGIMPFKYTLKIEALYDHGNMYDPSILAIT 209
Query: 686 PEDLRAKFQAGVANVAALSLAIGY 757
E L KF+ G+ NV L+LA+GY
Sbjct: 210 EEVLGEKFRTGLRNVTGLALAVGY 233
Score = 52.0 bits (119), Expect = 2e-05
Identities = 26/92 (28%), Positives = 44/92 (47%)
Frame = +3
Query: 231 GKKHNDAQAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGA 410
GK +A+ + P + +L H+ G +FT G+ ++D + N + + A+ GA
Sbjct: 58 GKNSLMRRAVDQLKEELPGIRQLEEHLYHGAGLIFTNGNFKAIKDVIDANCLGSAAKVGA 117
Query: 411 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKI 506
IAP V++ T + P AL+I KI
Sbjct: 118 IAPCDVILQPQRTSMSPNDIKILHALNIQCKI 149
>UniRef50_Q9U7P1 Cluster: 60S acidic ribosomal protein P0; n=1;
Eufolliculina uhligi|Rep: 60S acidic ribosomal protein
P0 - Eufolliculina uhligi
Length = 324
Score = 88.6 bits (210), Expect = 1e-16
Identities = 39/82 (47%), Positives = 58/82 (70%)
Frame = +2
Query: 509 KGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKP 688
KG I+I+N++H++ KVG SEA LL L + PFS+GL VK VYD+G++++ E+L +
Sbjct: 159 KGQIDIVNELHLIFKDKKVGNSEAVLLKKLGVKPFSFGLKVKNVYDNGSVYSAEVLKLTN 218
Query: 689 EDLRAKFQAGVANVAALSLAIG 754
+ L KF GV N+AA+SL +G
Sbjct: 219 DILLGKFMNGVRNIAAMSLTLG 240
Score = 68.1 bits (159), Expect = 2e-10
Identities = 37/87 (42%), Positives = 51/87 (58%)
Frame = +3
Query: 246 DAQAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 425
D + K+ P LE L+P ++GNV +F ++ EV + E+KV A A+ G IAP
Sbjct: 71 DFEKRKNTWTPKPELEHLIPLLRGNVCLIFCHAEMGEVLSAVEESKVPAEAKAGTIAPND 130
Query: 426 VVIPAHNTGLGPEKTSFFQALSIPTKI 506
V + TG+ P +TSFFQAL I TKI
Sbjct: 131 VHVYPGPTGMDPSQTSFFQALGIFTKI 157
Score = 52.0 bits (119), Expect = 2e-05
Identities = 23/53 (43%), Positives = 37/53 (69%)
Frame = +1
Query: 94 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRFSLRGSSIVLMGKNTMMR 252
K +Y+ K+ L++E P+ I A+NVGS+Q+Q +R LR + +L GKNT++R
Sbjct: 3 KYDYWEKLWTLIEEAPRILICEANNVGSKQLQDLRRVLRNKATILFGKNTLIR 55
>UniRef50_Q94660 Cluster: 60S acidic ribosomal protein P0; n=14;
Apicomplexa|Rep: 60S acidic ribosomal protein P0 -
Plasmodium falciparum (isolate 7G8)
Length = 316
Score = 88.2 bits (209), Expect = 2e-16
Identities = 45/82 (54%), Positives = 57/82 (69%)
Frame = +2
Query: 509 KGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKP 688
KG IEI VH++K G+KV AS ATLL N++P SYG+ V+ VYD G I+ ++LDI
Sbjct: 150 KGQIEIQEHVHLIKQGEKVTASSATLLRKFNMNP-SYGVDVRTVYDDGVIYDAKVLDITD 208
Query: 689 EDLRAKFQAGVANVAALSLAIG 754
ED+ KF GV+NVAALS A G
Sbjct: 209 EDILEKFSKGVSNVAALSRATG 230
Score = 86.6 bits (205), Expect = 6e-16
Identities = 45/93 (48%), Positives = 60/93 (64%), Gaps = 1/93 (1%)
Frame = +3
Query: 231 GKKHNDAQAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQA-PARPG 407
GK A+K +L P +EKLLP +K N+GFVF + DL E+R+ +L+NK + PAR G
Sbjct: 56 GKNTRIRTALKKNLQAVPQIEKLLPLVKLNMGFVFCKDDLSEIRNIILDNKSSSHPARLG 115
Query: 408 AIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKI 506
IAP+ V IP TG+ P TSF ++L I TKI
Sbjct: 116 VIAPIDVFIPPGPTGMDPSHTSFLESLGISTKI 148
Score = 60.5 bits (140), Expect = 4e-08
Identities = 30/66 (45%), Positives = 38/66 (57%)
Frame = +1
Query: 67 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRFSLRGSSIVLMGKNTM 246
M + K K Y K+ L+ +Y K IV DNVGS QM +R SLRG + +LMGKNT
Sbjct: 1 MAKLSKQQKKQMYIEKLSSLIQQYSKILIVHVDNVGSNQMASVRKSLRGKATILMGKNTR 60
Query: 247 MRKPSK 264
+R K
Sbjct: 61 IRTALK 66
>UniRef50_Q8SRJ7 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P0; n=1;
Encephalitozoon cuniculi|Rep: 60S ACIDIC RIBOSOMAL
PROTEIN P0 - Encephalitozoon cuniculi
Length = 290
Score = 79.4 bits (187), Expect = 9e-14
Identities = 36/82 (43%), Positives = 51/82 (62%)
Frame = +2
Query: 509 KGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKP 688
KG +EII+ +L GDKVG S+A LL MLNI PF Y + + Q+Y+ G I+ ++DI
Sbjct: 171 KGKVEIISPYKVLSEGDKVGPSQANLLGMLNIKPFCYKMTMHQIYEDGVIYDSSLIDIGE 230
Query: 689 EDLRAKFQAGVANVAALSLAIG 754
ED+ + ++ VAA SL G
Sbjct: 231 EDIFTSLRNAISTVAAASLGAG 252
Score = 60.1 bits (139), Expect = 6e-08
Identities = 35/94 (37%), Positives = 55/94 (58%)
Frame = +3
Query: 231 GKKHNDAQAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGA 410
GK +AI D P L + +KG+V FVF +G+ +++ + EN +A A+ G
Sbjct: 80 GKNSAIRRAIADL--GKPELSGVYDLVKGDVCFVFFKGNARDIKKAIDENVREACAKVGN 137
Query: 411 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISR 512
+A V + + TG+ P+KTS+FQAL I TKI++
Sbjct: 138 VAQRDVWVESCITGMTPDKTSYFQALGIATKITK 171
Score = 36.3 bits (80), Expect = 0.82
Identities = 19/63 (30%), Positives = 36/63 (57%)
Frame = +1
Query: 67 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRFSLRGSSIVLMGKNTM 246
M R+D K + + +L + Y + +V +NV S Q++ I+ G++ +LMGKN+
Sbjct: 25 MTRKDAKERKELTYERARKLFETYSRFALVKIENVVSTQLKDIKRQWGGNAELLMGKNSA 84
Query: 247 MRK 255
+R+
Sbjct: 85 IRR 87
>UniRef50_O94085 Cluster: Putative uncharacterized protein YLR339C;
n=5; Saccharomycetales|Rep: Putative uncharacterized
protein YLR339C - Saccharomyces cerevisiae (Baker's
yeast)
Length = 183
Score = 79.4 bits (187), Expect = 9e-14
Identities = 44/94 (46%), Positives = 52/94 (55%)
Frame = -2
Query: 511 LEILVGIERAWKKEVFSGPRPVLWAGMTTDNGAMAPGRAGAWTLFSNSLSRTSTRSPRVN 332
L ILVG +AWKKEV G PVL A +GA AP AGA TL S V
Sbjct: 4 LAILVGTPKAWKKEVLPGSIPVLTALTQMSSGATAPALAGAATLLETITFLISVNGSLVK 63
Query: 331 TKPTLPLMCGNSFSRAGLLSRWSLMACASLCFFP 230
TKPTLPL GN+FS++G + LMA ++ F P
Sbjct: 64 TKPTLPLTKGNNFSKSGKSDKKPLMALLTMVFLP 97
>UniRef50_Q52H32 Cluster: 60S acidic ribosomal protein P0; n=4;
Euplotes|Rep: 60S acidic ribosomal protein P0 - Euplotes
minuta
Length = 333
Score = 78.6 bits (185), Expect = 2e-13
Identities = 38/87 (43%), Positives = 56/87 (64%)
Frame = +2
Query: 494 PYQDFKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEI 673
P + K IEI D I+ G+KVG++EA LL LNI+PFSY L V V+D+G ++ P +
Sbjct: 162 PTKIAKAQIEISADKQIITEGEKVGSNEAALLQKLNINPFSYKLSVAHVFDNGNVYGPGV 221
Query: 674 LDIKPEDLRAKFQAGVANVAALSLAIG 754
LDI E + ++ ++NVA++SL G
Sbjct: 222 LDITSESIIESYKRVISNVASVSLESG 248
Score = 77.4 bits (182), Expect = 4e-13
Identities = 36/83 (43%), Positives = 57/83 (68%)
Frame = +3
Query: 282 PALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP 461
P +E L+ +KGN+G +FT DL +++D + + +APAR G++A V I A TGL P
Sbjct: 91 PHMEPLVRLLKGNLGIIFTNHDLTDIKDIIDRHTREAPARVGSVAQCDVWIKAGGTGLDP 150
Query: 462 EKTSFFQALSIPTKISRVLLKSS 530
++T+FFQ L+IPTKI++ ++ S
Sbjct: 151 KQTAFFQNLAIPTKIAKAQIEIS 173
Score = 48.0 bits (109), Expect = 3e-04
Identities = 20/63 (31%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Frame = +1
Query: 67 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRFSLR-GSSIVLMGKNT 243
M +DK K+ +F ++ + D+Y + +V DN+ ++Q+ R LR +S++LMG+NT
Sbjct: 1 MAGKDKKAKKNEFFERVYNVFDKYTRALLVKCDNISARQIHACRKELRSNNSLMLMGENT 60
Query: 244 MMR 252
+++
Sbjct: 61 LIK 63
>UniRef50_P26796 Cluster: 60S acidic ribosomal protein P0; n=12;
Trypanosomatidae|Rep: 60S acidic ribosomal protein P0 -
Trypanosoma cruzi
Length = 323
Score = 78.2 bits (184), Expect = 2e-13
Identities = 44/101 (43%), Positives = 64/101 (63%), Gaps = 1/101 (0%)
Frame = +3
Query: 213 LQYRAHGKKHNDAQAIK-DHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQ 389
LQ + ++ D +A D L N +EK L + GN +FT ++ + L +++VQ
Sbjct: 58 LQKKIVERRAEDKKASAYDKLLYNTCIEKKL--LCGNTALIFTNEEIPVITAVLDKHRVQ 115
Query: 390 APARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISR 512
APAR GAIAP V++PA NTG+ P+ TSFFQAL+I TKI++
Sbjct: 116 APARVGAIAPCDVIVPAGNTGMEPKATSFFQALNIATKIAK 156
Score = 74.5 bits (175), Expect = 3e-12
Identities = 38/82 (46%), Positives = 52/82 (63%)
Frame = +2
Query: 509 KGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKP 688
KGT+EI++D +L GD+V S ATLL L+ISPF Y + V+ V+D G +F E L I
Sbjct: 156 KGTVEIVSDKKVLSVGDRVDNSTATLLQKLDISPFYYQVEVQSVWDRGMLFLREDLSITD 215
Query: 689 EDLRAKFQAGVANVAALSLAIG 754
+ + G++NVAALSL G
Sbjct: 216 DVVEKYLLEGISNVAALSLGAG 237
Score = 37.1 bits (82), Expect = 0.47
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = +1
Query: 94 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRFSLRGSSIVLMGKNTMMRK 255
K Y + L +Y + DNV SQQ+ +R LRG ++MGK T+ +K
Sbjct: 8 KREYEERFNGCLTKYGRVLFCLMDNVRSQQVHDVRRDLRGLGELVMGKKTLQKK 61
>UniRef50_Q16RH9 Cluster: Temporarily assignedprotein name protein;
n=2; Culicidae|Rep: Temporarily assignedprotein name
protein - Aedes aegypti (Yellowfever mosquito)
Length = 1309
Score = 76.2 bits (179), Expect = 8e-13
Identities = 48/88 (54%), Positives = 56/88 (63%)
Frame = +2
Query: 494 PYQDFKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEI 673
P + KGTIEIINDV ILK GDK+ +QVY G+IF+P+I
Sbjct: 742 PIKISKGTIEIINDVPILKSGDKI----------------------EQVY--GSIFSPDI 777
Query: 674 LDIKPEDLRAKFQAGVANVAALSLAIGY 757
LDIKPEDLRAKFQ GVAN+A +SL IGY
Sbjct: 778 LDIKPEDLRAKFQVGVANLAGVSLEIGY 805
Score = 70.1 bits (164), Expect = 5e-11
Identities = 33/45 (73%), Positives = 38/45 (84%)
Frame = +3
Query: 252 QAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKV 386
QAI+ HL+ N L KLLPHIK VGFVFT+GDLVEVRDKL+E+KV
Sbjct: 693 QAIRVHLEVNSDLRKLLPHIKSYVGFVFTKGDLVEVRDKLMESKV 737
>UniRef50_A0DDF2 Cluster: 60S acidic ribosomal protein P0; n=6;
Paramecium tetraurelia|Rep: 60S acidic ribosomal protein
P0 - Paramecium tetraurelia
Length = 323
Score = 75.4 bits (177), Expect = 1e-12
Identities = 35/75 (46%), Positives = 48/75 (64%)
Frame = +3
Query: 288 LEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK 467
L+ L + G VGF+FT + +++ + ENKV+ PAR GA+AP+ VVIP TG+ P
Sbjct: 93 LDALKNSVAGKVGFIFTDTPVFDLKPIIEENKVETPARVGAVAPIDVVIPPGPTGMDPAS 152
Query: 468 TSFFQALSIPTKISR 512
FF AL IPTKI +
Sbjct: 153 IQFFHALQIPTKIEK 167
Score = 73.3 bits (172), Expect = 6e-12
Identities = 37/83 (44%), Positives = 50/83 (60%)
Frame = +2
Query: 509 KGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKP 688
KG I+I D +LK G KVG S+A LL L PF YG+ V YD+G+I + + +
Sbjct: 167 KGQIQITKDFVVLKTGQKVGQSQAVLLQKLGKKPFLYGMEVLACYDNGSILNKQQVSVNL 226
Query: 689 EDLRAKFQAGVANVAALSLAIGY 757
D+ AKFQ V NV+A+SL G+
Sbjct: 227 NDIVAKFQQNVRNVSAISLQNGW 249
Score = 52.4 bits (120), Expect = 1e-05
Identities = 26/64 (40%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Frame = +1
Query: 67 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRFSL-RGSSIVLMGKNT 243
MG+++ K F KI +LL +Y + IVG NVGS+Q+Q IR L + ++++++GKNT
Sbjct: 1 MGKKETKDKKPTQFKKIYELLSKYTQVIIVGLANVGSKQVQDIRRILAKRNALLVIGKNT 60
Query: 244 MMRK 255
+ +K
Sbjct: 61 LFKK 64
>UniRef50_Q22HK6 Cluster: 60S acidic ribosomal protein P0; n=2;
Tetrahymena thermophila|Rep: 60S acidic ribosomal
protein P0 - Tetrahymena thermophila SB210
Length = 324
Score = 74.5 bits (175), Expect = 3e-12
Identities = 36/83 (43%), Positives = 47/83 (56%)
Frame = +2
Query: 509 KGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKP 688
KG IEI +V + G K+G SE +LL +NI PFSYG+ YD+G I E+L I P
Sbjct: 167 KGQIEITKEVQVCTKGKKIGNSEVSLLEKMNIQPFSYGMKCFSDYDNGEILTEEVLSISP 226
Query: 689 EDLRAKFQAGVANVAALSLAIGY 757
+ F +AA+SLA GY
Sbjct: 227 SVILDAFAQNTLRIAAVSLATGY 249
Score = 66.5 bits (155), Expect = 7e-10
Identities = 31/77 (40%), Positives = 45/77 (58%)
Frame = +3
Query: 282 PALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP 461
P L L+PH+K + +VF + ++ K+ V APAR G +A V+IP TG+ P
Sbjct: 91 PQLASLIPHLKNKIAYVFHNDPIFALKPKIESFVVPAPARVGTVAQKDVMIPPGPTGMDP 150
Query: 462 EKTSFFQALSIPTKISR 512
+ +FF ALSI TKI +
Sbjct: 151 SQINFFHALSISTKIQK 167
Score = 50.4 bits (115), Expect = 5e-05
Identities = 24/59 (40%), Positives = 38/59 (64%)
Frame = +1
Query: 79 DKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRFSLRGSSIVLMGKNTMMRK 255
DK K + + +LL +Y + +NVGS Q+QQIR SL ++I+++GKNT++RK
Sbjct: 7 DKKAKKDAFIRRFYELLSKYDSIALCTLENVGSLQLQQIRRSLGSNNIMVIGKNTVVRK 65
>UniRef50_Q7QU12 Cluster: 60S acidic ribosomal protein P0; n=1;
Giardia lamblia ATCC 50803|Rep: 60S acidic ribosomal
protein P0 - Giardia lamblia ATCC 50803
Length = 326
Score = 68.5 bits (160), Expect = 2e-10
Identities = 36/82 (43%), Positives = 50/82 (60%)
Frame = +2
Query: 509 KGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKP 688
KG IEI+N V+++K GD V S ATLL L I PF Y + +YD G I+ +L+I
Sbjct: 150 KGKIEIVNPVNLIKKGDIVTPSHATLLQRLEIDPFFYAMSALNLYDDGEIYDAAVLEIDD 209
Query: 689 EDLRAKFQAGVANVAALSLAIG 754
+ AK+ AG+ A +SLA+G
Sbjct: 210 SVMEAKWNAGLE--AFVSLALG 229
Score = 65.3 bits (152), Expect = 2e-09
Identities = 36/92 (39%), Positives = 54/92 (58%)
Frame = +3
Query: 237 KHNDAQAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIA 416
K+ + + + LD++ L+ LLP+IK NV FVFT GD + + K +A A+ G +A
Sbjct: 60 KNTIIKRVINQLDDDK-LKNLLPYIKLNVAFVFTNGDTSAILKAFKKTKRKAAAKAGIVA 118
Query: 417 PLSVVIPAHNTGLGPEKTSFFQALSIPTKISR 512
P VVI T GP++ F+ AL I TKI++
Sbjct: 119 PADVVIEPMLTQSGPDQHGFYAALGIDTKINK 150
Score = 47.6 bits (108), Expect = 3e-04
Identities = 24/58 (41%), Positives = 35/58 (60%)
Frame = +1
Query: 82 KATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRFSLRGSSIVLMGKNTMMRK 255
K + Y K+ + L EY K +V DNV S Q+ QIR LRG + +L GKNT++++
Sbjct: 9 KQARRQAYVAKLERCLTEYKKIVLVSVDNVRSFQIAQIRRLLRGKAELLAGKNTIIKR 66
>UniRef50_A5BWW8 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 208
Score = 67.3 bits (157), Expect = 4e-10
Identities = 45/121 (37%), Positives = 62/121 (51%), Gaps = 1/121 (0%)
Frame = +3
Query: 279 NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLG 458
NP L+P + GNVG +FT+GDL EV +++ + KV APAR G +A + V++P NT L
Sbjct: 15 NPVFLNLVPLLVGNVGPIFTKGDLKEVDEEVAKYKVGAPARTGLVAHIDVIVPPGNTXLN 74
Query: 459 PEKTSFFQALSIPTKISRVLLKSSTMYTS*SPVTRLELLKPP-FSTC*TSLHSHMVLLLS 635
T PT SRV +K + Y P+ + L P + C T V LL
Sbjct: 75 LAHTRASXKPISPT-FSRVSIKMTLHY---QPIKEVALGNTPIIAFCDTDSPMQCVALLL 130
Query: 636 R 638
R
Sbjct: 131 R 131
>UniRef50_A7Q681 Cluster: Chromosome undetermined scaffold_55, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_55, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 223
Score = 64.5 bits (150), Expect = 3e-09
Identities = 43/119 (36%), Positives = 60/119 (50%), Gaps = 1/119 (0%)
Frame = +3
Query: 279 NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLG 458
NP L+P + GNVG +FT+GDL E +++ + KV APA G +A + V++P NTGL
Sbjct: 56 NPVFLNLVPLLVGNVGPIFTKGDLKEADEEVAKYKVGAPAHTGLVAHIDVIVPPGNTGLN 115
Query: 459 PEKTSFFQALSIPTKISRVLLKSSTMYTS*SPVTRLELLKPP-FSTC*TSLHSHMVLLL 632
T PT SRV +K + Y P+ + L P + C T V LL
Sbjct: 116 LAHTRASIKPISPT-FSRVSIKMTLHY---QPIKEVALGNTPIIAFCDTDSPMQCVALL 170
>UniRef50_Q6CW90 Cluster: Similarities with sp|O94085 Saccharomyces
cerevisiae YLR339CP; n=1; Kluyveromyces lactis|Rep:
Similarities with sp|O94085 Saccharomyces cerevisiae
YLR339CP - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 309
Score = 63.7 bits (148), Expect = 5e-09
Identities = 34/77 (44%), Positives = 40/77 (51%)
Frame = -1
Query: 506 NLGRDRKSLEERGLLWTEAGVVGGNDD*QWGNGTRTSWSLDFVLQQFVTDLNEVSAGEHE 327
NLG + +SLEER L W GV G N D WGN T + WS + V D+ + GE E
Sbjct: 180 NLGWNTQSLEERSLTWFHTGVDGENPDIFWGNSTSSGWSGNLVGDDDFLDILQGIVGEDE 239
Query: 326 ANVALDVWQQFLEGWIV 276
NV LD QQ W V
Sbjct: 240 TNVTLDERQQLFVVWEV 256
Score = 50.4 bits (115), Expect = 5e-05
Identities = 25/82 (30%), Positives = 51/82 (62%)
Frame = -2
Query: 757 VSNSQRKSSYISNSSLELGTEIFWFDVQNFRCKNSSRIIYLLNNKTI*EWRDVQHVEKGG 578
V++SQ +S +S E+ + D+Q+ ++ + ++ L + +T+ EWR+VQ V++
Sbjct: 96 VTSSQGNTSNGVDSRDEVRDQFIVSDIQDGSWEDLTVVVNLNDGQTVGEWRNVQQVQQRS 155
Query: 577 FRSSNLVTGLQDVYIVDDFNST 512
FRS++ +T + D+ + D+FN T
Sbjct: 156 FRSTDSLTSVNDLNVRDNFNGT 177
>UniRef50_Q8TX50 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Euryarchaeota|Rep: Acidic ribosomal protein P0 homolog -
Methanopyrus kandleri
Length = 357
Score = 62.9 bits (146), Expect = 8e-09
Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 3/97 (3%)
Frame = +3
Query: 255 AIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVI 434
A+++ LD P LE LL +I+G V F+FT D ++ L E+K APA+PG IAP +V+
Sbjct: 76 ALEEKLDERPELEPLLDYIEGPVAFIFTNLDPFKLYKLLEESKASAPAKPGDIAPEDIVV 135
Query: 435 PAHNTGLGPEK-TSFFQALSIPTKI--SRVLLKSSTM 536
P T P S Q +P +I +V++ T+
Sbjct: 136 PEGPTPFEPGPIVSELQQAGLPAQIQDGKVVITKDTV 172
Score = 42.7 bits (96), Expect = 0.009
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Frame = +1
Query: 70 GREDK-ATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRFSLR-GSSIVLMGKNT 243
G E K A WK ++ +L+DEY +V + + + Q+Q+IR LR +I+ M +NT
Sbjct: 12 GYEPKVAEWKRREVKELKELMDEYENVGLVDLEGIPAPQLQEIRAKLRERDTIIRMSRNT 71
Query: 244 MMR 252
+MR
Sbjct: 72 LMR 74
>UniRef50_A5C7V3 Cluster: Putative uncharacterized protein; n=2;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 742
Score = 60.9 bits (141), Expect = 3e-08
Identities = 32/82 (39%), Positives = 46/82 (56%)
Frame = +3
Query: 210 WLQYRAHGKKHNDAQAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQ 389
WL R + + A K NP L+P + GNVG + T+GDL EV ++ + KV
Sbjct: 592 WLPKRLFSQHSSRLHAEKT---GNPVFLNLVPLLVGNVGLISTKGDLKEVDKEVAKYKVG 648
Query: 390 APARPGAIAPLSVVIPAHNTGL 455
APAR G ++ + V++P NTGL
Sbjct: 649 APARAGLVSHIDVIVPPGNTGL 670
>UniRef50_Q98S65 Cluster: 60S acidic ribosomal protein P0; n=1;
Guillardia theta|Rep: 60S acidic ribosomal protein P0 -
Guillardia theta (Cryptomonas phi)
Length = 297
Score = 58.8 bits (136), Expect = 1e-07
Identities = 30/92 (32%), Positives = 48/92 (52%)
Frame = +3
Query: 231 GKKHNDAQAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGA 410
GK + ++D L N+ ++L I GNV F+FT D +++ L N + A+ G
Sbjct: 55 GKNTLIKKVLRDRLKNSTLSNEILTKINGNVSFIFTNEDPFFIQEILKNNSLPTAAKIGQ 114
Query: 411 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKI 506
+A V + T + P+ FQ+L+IPTKI
Sbjct: 115 VAQSDVYLSQGLTNISPDGIGIFQSLNIPTKI 146
Score = 53.2 bits (122), Expect = 7e-06
Identities = 26/82 (31%), Positives = 45/82 (54%)
Frame = +2
Query: 494 PYQDFKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEI 673
P + KG IEII + +L+ G K+ +EATLL LNI PF + + Y++G + P +
Sbjct: 143 PTKILKGQIEIITNFKVLEKGKKINEAEATLLQKLNILPFYNEIKIISFYENGKSYDPSV 202
Query: 674 LDIKPEDLRAKFQAGVANVAAL 739
L+ F+ ++++ +L
Sbjct: 203 LNFNESMFDKSFKDCLSSIESL 224
>UniRef50_O74109 Cluster: Acidic ribosomal protein P0 homolog; n=8;
Euryarchaeota|Rep: Acidic ribosomal protein P0 homolog -
Pyrococcus horikoshii
Length = 342
Score = 54.8 bits (126), Expect = 2e-06
Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Frame = +3
Query: 282 PALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP 461
P LEKL+ +I G + T + ++ L +N+ APA+PGA+ P VV+PA T L P
Sbjct: 74 PELEKLVEYIDRGAGILVTNMNPFKLYKFLQQNRQPAPAKPGAVVPKDVVVPAGPTPLAP 133
Query: 462 EK-TSFFQALSIPTKISR 512
QAL IP +I +
Sbjct: 134 GPIVGQMQALGIPARIEK 151
Score = 52.0 bits (119), Expect = 2e-05
Identities = 26/83 (31%), Positives = 41/83 (49%)
Frame = +2
Query: 509 KGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKP 688
KG + I D +LK G+ + A +LN L I P GL V VY+ G ++ P++L I
Sbjct: 151 KGKVTIQKDTTVLKAGEVITPELANILNALGIQPLEVGLDVLAVYEDGIVYTPDVLAIDE 210
Query: 689 EDLRAKFQAGVANVAALSLAIGY 757
++ Q + L++ I Y
Sbjct: 211 QEYIDMLQKAYMHAFNLAVNIAY 233
>UniRef50_A7DRL3 Cluster: Ribosomal protein L10; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L10
- Candidatus Nitrosopumilus maritimus SCM1
Length = 288
Score = 54.0 bits (124), Expect = 4e-06
Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = +3
Query: 282 PALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL-- 455
P ++ ++ KG V +FT ++ L +NK+ AR G IA + VV+PA NTG+
Sbjct: 73 PGMKDMIGEFKGQVMIMFTNMSPFKLNVLLAKNKIMMMARGGDIASVDVVVPAKNTGIAP 132
Query: 456 GPEKTSFFQALSIPTKISR 512
GP T F +A IPTKI +
Sbjct: 133 GPMLTEFKEA-GIPTKIDQ 150
>UniRef50_A0RX06 Cluster: Ribosomal protein L10; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L10 - Cenarchaeum
symbiosum
Length = 274
Score = 52.4 bits (120), Expect = 1e-05
Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 5/97 (5%)
Frame = +3
Query: 282 PALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL-- 455
P ++K++ + G F+FT + L +NK AR G IA + V +PA NTG+
Sbjct: 59 PGMDKMMDQLTGQCMFMFTDISPFTLNVLLKKNKTMMAARAGDIASIDVTVPAKNTGIAP 118
Query: 456 GPEKTSFFQALSIPTKISR---VLLKSSTMYTS*SPV 557
GP T F +A IPTKI + +LK +T P+
Sbjct: 119 GPMLTEFKEA-GIPTKIDQGTIWILKDTTPVKKGEPI 154
>UniRef50_A3H9G5 Cluster: Ribosomal protein L10; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L10 -
Caldivirga maquilingensis IC-167
Length = 303
Score = 50.0 bits (114), Expect = 6e-05
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Frame = +3
Query: 279 NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLG 458
N +EK ++ G GF+FT + ++ +++N V+ A+PG + +++PA NTG+
Sbjct: 86 NAEIEK---YLSGENGFIFTNENPFDLYRIIVDNSVRRYAKPGDVLQSDIIVPAGNTGIN 142
Query: 459 PEKT-SFFQALSIPTKI 506
P S F L IPT+I
Sbjct: 143 PGPVLSRFSKLKIPTQI 159
>UniRef50_Q8ZTT3 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Pyrobaculum|Rep: Acidic ribosomal protein P0 homolog -
Pyrobaculum aerophilum
Length = 345
Score = 49.6 bits (113), Expect = 8e-05
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Frame = +3
Query: 309 IKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK-TSFFQA 485
++G VGF FT + EV + EN V+ A+PG AP +V+PA T P S F
Sbjct: 90 VRGEVGFFFTSFNPAEVIKIVAENSVRRAAQPGDKAPFDIVVPAGPTNASPGPIISKFGK 149
Query: 486 LSIPTKI 506
L IPT++
Sbjct: 150 LKIPTRV 156
>UniRef50_Q2NEW2 Cluster: 50S ribosomal protein L10P; n=1;
Methanosphaera stadtmanae DSM 3091|Rep: 50S ribosomal
protein L10P - Methanosphaera stadtmanae (strain DSM
3091)
Length = 332
Score = 48.4 bits (110), Expect = 2e-04
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Frame = +3
Query: 258 IKDHLDNNPA--LEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVV 431
IK L+N+ +E L +++G VFT+ + ++ L ++K +APA+ G+IAP +V
Sbjct: 59 IKIALENSDKEEVEGLADYLEGQPAMVFTKMNPFKLFKILEDSKTEAPAKAGSIAPADIV 118
Query: 432 IPAHNTGLGPEK-TSFFQALSIPTKISR 512
+PA +T P Q + IP KI +
Sbjct: 119 VPAGDTSFPPGPILGELQQVGIPAKIDK 146
>UniRef50_A1RWQ2 Cluster: Ribosomal protein L10; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L10 - Thermofilum
pendens (strain Hrk 5)
Length = 294
Score = 47.6 bits (108), Expect = 3e-04
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Frame = +3
Query: 288 LEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP-E 464
+E + H++G +FT + E+ L + K+ AR G IA +V+PA NTG+ P
Sbjct: 80 VEGIEEHLRGQNAVIFTNKNPFEILFFLDKQKIMREARAGDIATSEIVLPAGNTGIPPGP 139
Query: 465 KTSFFQALSIPTKI 506
S F L IPT++
Sbjct: 140 MISNFNKLGIPTRV 153
>UniRef50_Q3LWA7 Cluster: Ribosomal protein L10; n=1; Bigelowiella
natans|Rep: Ribosomal protein L10 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 251
Score = 47.2 bits (107), Expect = 4e-04
Identities = 22/69 (31%), Positives = 38/69 (55%)
Frame = +3
Query: 306 HIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQA 485
++ N+G +FT +L + + + + + G IA +++I L P +T FFQA
Sbjct: 76 YLSDNIGLIFTNSNLKILNETFKQYFLTSFVNAGEIAQRNIIIKKGIKNLSPSQTPFFQA 135
Query: 486 LSIPTKISR 512
L IPT+IS+
Sbjct: 136 LGIPTRISK 144
Score = 40.3 bits (90), Expect = 0.050
Identities = 20/68 (29%), Positives = 36/68 (52%)
Frame = +2
Query: 494 PYQDFKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEI 673
P + K +IEII D+ ++ + S+ LL L+I P YG+ +K+++ S +I
Sbjct: 139 PTRISKSSIEIIEDILLVSKNQALNKSQEVLLKKLDIKPHKYGVKIKKIFSSKGEINLKI 198
Query: 674 LDIKPEDL 697
L + +L
Sbjct: 199 LQMNNNNL 206
Score = 39.5 bits (88), Expect = 0.088
Identities = 18/46 (39%), Positives = 29/46 (63%)
Frame = +1
Query: 112 KIIQLLDEYPKCFIVGADNVGSQQMQQIRFSLRGSSIVLMGKNTMM 249
K I LL+ Y IV +N+ S+Q+ IR LRG+S +++GK + +
Sbjct: 11 KFISLLNSYDTMVIVNMNNIRSKQIHDIRKHLRGTSEIVVGKKSFL 56
>UniRef50_O28781 Cluster: Acidic ribosomal protein P0 homolog; n=1;
Archaeoglobus fulgidus|Rep: Acidic ribosomal protein P0
homolog - Archaeoglobus fulgidus
Length = 339
Score = 46.8 bits (106), Expect = 6e-04
Identities = 30/81 (37%), Positives = 40/81 (49%)
Frame = +2
Query: 509 KGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKP 688
KG + + ++K G+ V A L L+I P GL VK + DSG I PE L I
Sbjct: 149 KGKVVVKATTTVVKAGEVVRPEVARALERLDIKPIKIGLDVKAMLDSGVILTPETLAIDT 208
Query: 689 EDLRAKFQAGVANVAALSLAI 751
E + FQ A AL+LA+
Sbjct: 209 EKVLEDFQR--AYQMALNLAV 227
>UniRef50_Q8PY51 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Archaea|Rep: Acidic ribosomal protein P0 homolog -
Methanosarcina mazei (Methanosarcina frisia)
Length = 347
Score = 43.6 bits (98), Expect = 0.005
Identities = 24/82 (29%), Positives = 37/82 (45%)
Frame = +2
Query: 512 GTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPE 691
G + + + K G+ V AT+L+ L I P GL ++ YD GTI+ PE+L +
Sbjct: 153 GKVAVKETKVVCKAGEAVPQKLATMLSKLEIYPLIVGLDLRAAYDDGTIYEPELLAVDES 212
Query: 692 DLRAKFQAGVANVAALSLAIGY 757
+ N LS+ Y
Sbjct: 213 KYFSDIIRAAQNAFNLSVNTAY 234
>UniRef50_Q7R447 Cluster: GLP_254_32992_33747; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_254_32992_33747 - Giardia lamblia
ATCC 50803
Length = 251
Score = 42.7 bits (96), Expect = 0.009
Identities = 21/77 (27%), Positives = 42/77 (54%)
Frame = +1
Query: 22 LVLKFHRSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRF 201
L+ + RS L+++ ++ + K +I + D Y +++ + N+ S QQ+R
Sbjct: 10 LMPRSKRSKTVVLAKVEKKTREA-KQEIIKQIREAFDTYDTVYVIDSHNMTSSSWQQLRT 68
Query: 202 SLRGSSIVLMGKNTMMR 252
S++G + + MGKN +MR
Sbjct: 69 SMKGYARIFMGKNQLMR 85
>UniRef50_A7PSP2 Cluster: Chromosome chr6 scaffold_28, whole genome
shotgun sequence; n=3; Vitis vinifera|Rep: Chromosome
chr6 scaffold_28, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 105
Score = 42.3 bits (95), Expect = 0.013
Identities = 31/78 (39%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Frame = -2
Query: 478 KKEVFSGPR--PVLWAGMTTDNGAMAPGRAGAWTLFSNSLSRTSTRSPRVNTKPTLPLMC 305
++ +F R PVL G T A P RAGA TL+ + S TS +SP V PTLP
Sbjct: 6 RESLFKSTRLSPVLPGGAMTSIWATNPVRAGAPTLYLATSSSTSFKSPFVKIGPTLPTRR 65
Query: 304 GNSFSRAG--LLSRWSLM 257
G + G + S SLM
Sbjct: 66 GTRLRKTGFPVFSARSLM 83
>UniRef50_P13553 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Halobacteriaceae|Rep: Acidic ribosomal protein P0
homolog - Halobacterium salinarium (Halobacterium
halobium)
Length = 352
Score = 42.3 bits (95), Expect = 0.013
Identities = 19/58 (32%), Positives = 32/58 (55%)
Frame = +3
Query: 288 LEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP 461
L+ L +++G VG V T + + +L +K AP G +AP +V+P +TG+ P
Sbjct: 78 LDTLTEYVEGEVGLVATNDNPFGLYQQLENSKTPAPINAGEVAPNDIVVPEGDTGIDP 135
Score = 40.3 bits (90), Expect = 0.050
Identities = 16/58 (27%), Positives = 31/58 (53%)
Frame = +1
Query: 76 EDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRFSLRGSSIVLMGKNTMM 249
E+ WK +++ LL+ Y +V + S+Q+Q +R L G + + M +NT++
Sbjct: 10 EEVPEWKRQEVAELVDLLETYDSVGVVNVTGIPSKQLQDMRRGLHGQAALRMSRNTLL 67
>UniRef50_UPI00015BB116 Cluster: LSU ribosomal protein L10P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L10P - Ignicoccus hospitalis KIN4/I
Length = 346
Score = 41.9 bits (94), Expect = 0.017
Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Frame = +2
Query: 512 GTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVY-DSGTIFAP-EILDIK 685
GTI I D + KPGD + A+LL L I+P + +K Y S + P E L +
Sbjct: 160 GTIHIAKDTVVAKPGDVISPELASLLQKLGITPMELKMKIKGAYIKSLNRWVPAEELVLD 219
Query: 686 PEDLRAKFQAGVANVAALSLAIGY 757
+ + Q N AL ++I Y
Sbjct: 220 LNKYKEQIQEAYTNALALGVSIAY 243
Score = 41.5 bits (93), Expect = 0.022
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Frame = +3
Query: 315 GNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK-TSFFQALS 491
G+ F+FT + ++ K+ + + APA+PG +A +V+PA +TGL P S F L
Sbjct: 93 GSNMFIFTNDNPFKLALKISKFSMPAPAKPGDVAQSEIVVPAGDTGLTPGPILSTFGKLK 152
Query: 492 IPTKI 506
I T +
Sbjct: 153 IKTMV 157
>UniRef50_P15826 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Methanococcus|Rep: Acidic ribosomal protein P0 homolog -
Methanococcus vannielii
Length = 336
Score = 41.1 bits (92), Expect = 0.029
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +3
Query: 279 NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLG 458
NP KL+ ++ V T + ++ L E+K AP + GAIAP + + + +TG+
Sbjct: 78 NPEFAKLVDYLDKGAAIVVTEMNPFKLFKTLEESKSPAPIKGGAIAPCDIEVKSGSTGMP 137
Query: 459 PEK-TSFFQALSIPTKISR 512
P S +A+ IP I +
Sbjct: 138 PGPFLSELKAVGIPAAIDK 156
>UniRef50_Q9Y9W8 Cluster: Acidic ribosomal protein P0 homolog; n=1;
Aeropyrum pernix|Rep: Acidic ribosomal protein P0
homolog - Aeropyrum pernix
Length = 341
Score = 39.5 bits (88), Expect = 0.088
Identities = 31/86 (36%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Frame = +2
Query: 497 YQDFKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEIL 676
YQ G I I + + KPGD + A LL L I P G+ VK D G + ++L
Sbjct: 153 YQVRGGKIYIAKETVVAKPGDVISEDLAGLLMALGIRPIEKGVRVKFAIDGGVLITEDLL 212
Query: 677 DIKPEDLRAKFQAGVANVA--ALSLA 748
+P D+ A F+ V + A AL LA
Sbjct: 213 --RP-DIEA-FRGDVIDAAKEALGLA 234
>UniRef50_A3DNI2 Cluster: Ribosomal protein L10; n=1;
Staphylothermus marinus F1|Rep: Ribosomal protein L10 -
Staphylothermus marinus (strain ATCC 43588 / DSM 3639 /
F1)
Length = 338
Score = 39.1 bits (87), Expect = 0.12
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +3
Query: 330 VFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK-TSFFQALSIPTKI 506
+FT + E+ L + K + +PG IA +VIP NTGL P S F L IPT+I
Sbjct: 92 LFTHMNAFELSLLLDKYKAKTYYKPGEIAQQEIVIPEGNTGLSPGPILSTFSKLKIPTRI 151
Score = 34.7 bits (76), Expect = 2.5
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = +2
Query: 515 TIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPED 694
+I I D + KPGD + A+LL L+I+ + +K YD G I + L + E+
Sbjct: 155 SIVITRDTVVAKPGDTISEELASLLQRLDIALKEVKINIKAAYDHGIIILRDQLVLDLEE 214
Query: 695 LR 700
+
Sbjct: 215 YK 216
>UniRef50_Q2Y4X9 Cluster: Acidic ribosomal protein P0; n=1;
uncultured archaeon|Rep: Acidic ribosomal protein P0 -
uncultured archaeon
Length = 313
Score = 37.9 bits (84), Expect = 0.27
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = +1
Query: 91 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRFSLRGSSIVLMGKNTMMRK 255
WK I LL Y + +GS+Q+Q+IR RG +++ + KN+M+ +
Sbjct: 11 WKEEQVASINSLLGSYDTIGLAKIRGLGSKQLQRIRKEFRGDALLKVSKNSMIAR 65
Score = 36.7 bits (81), Expect = 0.62
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +3
Query: 288 LEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP-E 464
+ ++ I + +FT D + L + K+ AP + GA+AP+ +VI T L P
Sbjct: 72 MNDMVDFIDDQMALIFTDLDAFALYKVLEKGKIPAPIKAGAVAPIDIVIEEGPTSLRPGP 131
Query: 465 KTSFFQALSIPTKI 506
Q L IP+ I
Sbjct: 132 VVGELQNLGIPSGI 145
>UniRef50_A3CSJ7 Cluster: Ribosomal protein L10; n=4;
Methanomicrobiales|Rep: Ribosomal protein L10 -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 346
Score = 37.9 bits (84), Expect = 0.27
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = +2
Query: 512 GTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPE 691
G ++I ++K G+ + A L L + P GL+++ Y TIF P++L I E
Sbjct: 150 GKVKIRETKTVVKKGEVINKKVAEALVKLGVKPMDVGLILQAAYYRETIFTPDLLAIDEE 209
Score = 35.9 bits (79), Expect = 1.1
Identities = 17/53 (32%), Positives = 33/53 (62%)
Frame = +1
Query: 91 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRFSLRGSSIVLMGKNTMM 249
WK + +I + ++E+ +V + + Q+QQIR +LRG++ V M +NT++
Sbjct: 11 WKKDEVEEIKRGIEEHTLVGVVDMYGIPASQVQQIRRNLRGTARVKMARNTLI 63
Score = 33.5 bits (73), Expect = 5.8
Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +3
Query: 306 HIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK-TSFFQ 482
H +G +FT + ++ L + K + A+PG AP +VIP T P Q
Sbjct: 80 HAEGQSALIFTNENPFKLFKLLEKTKTKMAAKPGETAPEDIVIPKGPTSFKPGPIVGELQ 139
Query: 483 ALSIPTKI 506
+ IP I
Sbjct: 140 QVGIPAAI 147
>UniRef50_Q7S302 Cluster: mRNA turnover protein 4 homolog; n=17;
Ascomycota|Rep: mRNA turnover protein 4 homolog -
Neurospora crassa
Length = 252
Score = 37.9 bits (84), Expect = 0.27
Identities = 25/76 (32%), Positives = 38/76 (50%)
Frame = +3
Query: 213 LQYRAHGKKHNDAQAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQA 392
L RA G DAQA L+KL ++ G+VG +FT D E++D +
Sbjct: 72 LTARALGTTPEDAQA--------DGLDKLSKYLSGSVGLIFTNRDPSEIKDYFVNLTQVD 123
Query: 393 PARPGAIAPLSVVIPA 440
AR G++A ++ IP+
Sbjct: 124 FARAGSVATRTITIPS 139
>UniRef50_P96039 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Sulfolobaceae|Rep: Acidic ribosomal protein P0 homolog -
Sulfolobus solfataricus
Length = 338
Score = 37.5 bits (83), Expect = 0.36
Identities = 29/76 (38%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Frame = +3
Query: 288 LEKLLPHIKGNVGFVFTRGDLVEVRDKLLEN-KVQAPARPGAIAPLSVVIPAHNTGL--G 458
+EKL ++ G F+FT+ D + + EN K++ A PG A VVIPA +TG+ G
Sbjct: 79 IEKLEQYLTGPNVFIFTK-DNPFITNMFFENYKLRRYAMPGDKAEEEVVIPAGDTGMPAG 137
Query: 459 PEKTSFFQALSIPTKI 506
P S F L + TK+
Sbjct: 138 P-ILSVFGKLKVQTKV 152
>UniRef50_Q74N82 Cluster: NEQ091; n=1; Nanoarchaeum equitans|Rep:
NEQ091 - Nanoarchaeum equitans
Length = 284
Score = 37.1 bits (82), Expect = 0.47
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Frame = +3
Query: 336 TRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIP--AHNTGLGPEKTSFFQALSIPTKIS 509
T ++ ++ +E+KV P + G IAP +VIP N +GP +T +AL + TK++
Sbjct: 86 TNENIFKIAKIFMEHKVNVPIKAGEIAPKDIVIPKGITNIPVGPIQTE-LRALGVKTKVT 144
>UniRef50_Q4FX48 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major strain Friedlin
Length = 1522
Score = 36.3 bits (80), Expect = 0.82
Identities = 24/68 (35%), Positives = 30/68 (44%)
Frame = +1
Query: 139 PKCFIVGADNVGSQQMQQIRFSLRGSSIVLMGKNTMMRKPSKTTWTTIQPSRNCCHTSRA 318
P A S + Q RG S+ +MGK +MR+ S T T+ PS TSR
Sbjct: 315 PSTDSTAAPGTSSSSVAQASLKSRGRSLSVMGKKKVMRRASTGTATSRPPS---AATSRR 371
Query: 319 TLASCSPA 342
SCS A
Sbjct: 372 PSVSCSAA 379
>UniRef50_A4CNC1 Cluster: Putative uncharacterized protein; n=2;
Flavobacteriales|Rep: Putative uncharacterized protein -
Robiginitalea biformata HTCC2501
Length = 1151
Score = 35.9 bits (79), Expect = 1.1
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Frame = -2
Query: 634 LNNKTI*EWRDVQHVEKGGFRSSNLV-TGLQDV--YIVDDFNSTLEILVGIERAWKKEVF 464
LNN TI +WRD+ ++ +R + G D+ I+ DFN + + G +EV+
Sbjct: 155 LNNDTIHDWRDLTVEQEEIWRLEDTTGNGTADISTRILHDFNEEVTDVAGALLVDGEEVY 214
Query: 463 SGPRPVLWAGMTTDNG 416
G P +W +T +NG
Sbjct: 215 VGVAPDMWR-LTDENG 229
>UniRef50_A0YSL9 Cluster: Putative uncharacterized protein; n=1;
Lyngbya sp. PCC 8106|Rep: Putative uncharacterized
protein - Lyngbya sp. PCC 8106
Length = 1122
Score = 34.7 bits (76), Expect = 2.5
Identities = 20/70 (28%), Positives = 33/70 (47%)
Frame = +1
Query: 187 QQIRFSLRGSSIVLMGKNTMMRKPSKTTWTTIQPSRNCCHTSRATLASCSPAETSLRSVT 366
QQ R + G I+++G TM PS+T + Q + T L+ AET R +
Sbjct: 857 QQQRQKVSGQDILIVGNPTMPTVPSQTNLSAEQITAQLSDTRSEQLSDLPGAETEAREIA 916
Query: 367 NCWRTKSKLQ 396
++T+ L+
Sbjct: 917 RIFQTEPLLK 926
>UniRef50_Q0W051 Cluster: 50S ribosomal protein L10E; n=1;
uncultured methanogenic archaeon RC-I|Rep: 50S ribosomal
protein L10E - Uncultured methanogenic archaeon RC-I
Length = 304
Score = 34.7 bits (76), Expect = 2.5
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
Frame = +3
Query: 264 DHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAH 443
D L ++L ++ G + V+T + ++ L K + A+ G IAP +VIP
Sbjct: 73 DSLPEGEKAKELAKYVDGQMLIVYTNDNPFKLYKLLNATKSKRAAKGGDIAPSDIVIPKG 132
Query: 444 NTGLGP-EKTSFFQALSIPTKI--SRVLLKSS 530
T P FQ + IP I +V++K +
Sbjct: 133 PTSFKPGPLVGEFQQVGIPAGIEGGKVVIKDT 164
>UniRef50_A0B921 Cluster: Ribosomal protein L10; n=1; Methanosaeta
thermophila PT|Rep: Ribosomal protein L10 - Methanosaeta
thermophila (strain DSM 6194 / PT)
(Methanothrixthermophila (strain DSM 6194 / PT))
Length = 321
Score = 34.3 bits (75), Expect = 3.3
Identities = 18/80 (22%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +3
Query: 270 LDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 449
L ++ ++ L+ +I+ +F+ + ++ L K P + GA+AP+ +V+ + T
Sbjct: 71 LKSDESIRPLVDYIEDQTALIFSDANPFALKKMLDAEKRPMPIKAGAVAPVDIVVESGET 130
Query: 450 GLGP-EKTSFFQALSIPTKI 506
P Q+ IP I
Sbjct: 131 SFSPGPMVGKLQSAGIPAAI 150
>UniRef50_Q9LLN7 Cluster: Leucine rich repeat containing protein
kinase; n=8; Oryza sativa|Rep: Leucine rich repeat
containing protein kinase - Oryza sativa (Rice)
Length = 1074
Score = 33.9 bits (74), Expect = 4.4
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 9/84 (10%)
Frame = +3
Query: 270 LDNNPALEKL-LPH--IKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSV---- 428
L N AL+KL LPH ++GN+GF+ + + ++ D +L++ A P + LS
Sbjct: 396 LGNIAALQKLVLPHNNLEGNMGFLSSLSECRQLEDLILDHNSFVGALPDHLGNLSARLIS 455
Query: 429 VIPAHN--TGLGPEKTSFFQALSI 494
I HN G PEK S +L +
Sbjct: 456 FIADHNKLAGSLPEKMSNLSSLEL 479
>UniRef50_Q9C548 Cluster: Myb-family transcription factor, putative;
n=2; Arabidopsis thaliana|Rep: Myb-family transcription
factor, putative - Arabidopsis thaliana (Mouse-ear
cress)
Length = 873
Score = 33.9 bits (74), Expect = 4.4
Identities = 35/112 (31%), Positives = 50/112 (44%), Gaps = 8/112 (7%)
Frame = -2
Query: 556 TGLQDVYIVDDFNSTLEILVGIERAWKKEVFSGPRPVLWAGMTTDNGAMAPGRAGAWTLF 377
TGLQ N L + VG R K++ G P+L +G T GA A G + TL
Sbjct: 294 TGLQRTEAQMAANRALSLAVG-NRLPSKKLAVGMTPMLSSG--TIKGAQANGASSGSTLQ 350
Query: 376 SN--------SLSRTSTRSPRVNTKPTLPLMCGNSFSRAGLLSRWSLMACAS 245
+LSR +T P ++ + GNS SRA L+ + +A A+
Sbjct: 351 GQQQPQPQIQALSRATTSVPVAKSRVPVKKTTGNSTSRADLMVTANSVAAAA 402
>UniRef50_Q5BY73 Cluster: SJCHGC01801 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC01801 protein - Schistosoma
japonicum (Blood fluke)
Length = 236
Score = 33.9 bits (74), Expect = 4.4
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Frame = +3
Query: 261 KDHLDN-NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIP 437
K H D+ P L L ++KG +FT+ E+R++L + RPGA A +V I
Sbjct: 73 KTHKDSYRPKLHHLCKYLKGQCALLFTKSSPSELREQLDAFRSAEYCRPGAPAEQTVRIA 132
Query: 438 AHNTGLGPEKTS-FFQALSIPTKISR 512
+ P + L +P K+ R
Sbjct: 133 SGPLPKFPHTMEPVLRQLGMPVKLVR 158
>UniRef50_A7KAI1 Cluster: Atg2p; n=1; Pichia angusta|Rep: Atg2p -
Pichia angusta (Yeast) (Hansenula polymorpha)
Length = 1765
Score = 33.9 bits (74), Expect = 4.4
Identities = 22/93 (23%), Positives = 43/93 (46%), Gaps = 3/93 (3%)
Frame = +1
Query: 163 DNVGSQQMQQIRFSLRGSSIVLMGKNTMM---RKPSKTTWTTIQPSRNCCHTSRATLASC 333
D++ + M+ + F+ + S V M + + P +T+ QPS C A ++ C
Sbjct: 257 DDIHNSLMESMMFATQTSESVYMSATSNVFSSTTPRASTYENHQPSAVCV----AYVSKC 312
Query: 334 SPAETSLRSVTNCWRTKSKLQLVLVPLPHCQSS 432
S L+++ N ++++ P+P C SS
Sbjct: 313 SVQFDGLQNIENMQVNLGRIKIAASPIPECLSS 345
>UniRef50_UPI00006D0E10 Cluster: hypothetical protein
TTHERM_00070730; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00070730 - Tetrahymena
thermophila SB210
Length = 5422
Score = 33.5 bits (73), Expect = 5.8
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +3
Query: 267 HLDNNPALEKLLPHIKGNVGFVFTRGDLVEVR 362
+L NN L+KLLP I+G ++ RGDL E++
Sbjct: 831 NLANNEVLQKLLPIIEGKSLVLYERGDLKEIK 862
>UniRef50_A0CZG7 Cluster: Chromosome undetermined scaffold_32, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_32,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1153
Score = 33.5 bits (73), Expect = 5.8
Identities = 15/47 (31%), Positives = 30/47 (63%), Gaps = 3/47 (6%)
Frame = +2
Query: 572 SEATLLNMLNISPF---SYGLVVKQVYDSGTIFAPEILDIKPEDLRA 703
+++ +LN +N F SYGL + + YD ++A ++L+I+P ++A
Sbjct: 265 NQSLVLNPINSKAFYLKSYGLRLTENYDEALVWADKVLEIEPNHIKA 311
>UniRef50_UPI00015B4FCF Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 170
Score = 33.1 bits (72), Expect = 7.7
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = +1
Query: 265 TTWTTIQPSRNCCHTSRATLASCSP---AETSLRSVTNCWRTKS 387
T WTT + T+ AT A+ + A ++ ++TN WRTKS
Sbjct: 107 TRWTTTAATTTTTATTAATTAAAATSTSASNAISTITNAWRTKS 150
>UniRef50_Q7K1Q7 Cluster: LD47064p; n=7; Endopterygota|Rep: LD47064p
- Drosophila melanogaster (Fruit fly)
Length = 256
Score = 33.1 bits (72), Expect = 7.7
Identities = 18/71 (25%), Positives = 35/71 (49%)
Frame = +1
Query: 40 RSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRFSLRGSS 219
R +L++ R+ A WK I + +YP F+ N+ + ++ +R L+ +S
Sbjct: 6 RDKKVSLTKTDRKGLA-WKQRIVDDIRFCVGKYPNIFVFQVQNMRNSLLKDLRQELKKNS 64
Query: 220 IVLMGKNTMMR 252
+ GKN +M+
Sbjct: 65 RFIFGKNRVMQ 75
>UniRef50_Q9USZ6 Cluster: mRNA turnover protein 4 homolog; n=1;
Schizosaccharomyces pombe|Rep: mRNA turnover protein 4
homolog - Schizosaccharomyces pombe (Fission yeast)
Length = 241
Score = 33.1 bits (72), Expect = 7.7
Identities = 26/61 (42%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +3
Query: 261 KDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAP-ARPGAIAPLSVVIP 437
++H +N L KLL G VG +FT EV E+ VQ AR GA+AP + VIP
Sbjct: 83 EEHAENVSKLTKLL---HGAVGLLFTNSKPDEVIG-YFESFVQNDFARAGAVAPFTHVIP 138
Query: 438 A 440
A
Sbjct: 139 A 139
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 824,148,529
Number of Sequences: 1657284
Number of extensions: 17698175
Number of successful extensions: 53988
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 51512
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 53967
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62969581935
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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