Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021756
(758 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0211 - 1601129-1601272,1601670-1602062,1602142-1602240,160... 109 2e-24
11_01_0210 - 1647922-1648065,1648459-1648851,1648930-1649028,164... 109 2e-24
08_01_0215 - 1714224-1714364,1714795-1715187,1715279-1715377,171... 108 5e-24
11_01_0676 - 5511755-5511831,5512857-5513052,5513462-5513577,551... 34 0.14
11_01_0033 - 251730-251855,252068-252144,252228-252318,252644-25... 33 0.25
12_01_0032 - 266954-267079,267204-267245,267290-267366,267450-26... 32 0.43
02_01_0561 + 4120268-4120339,4121462-4121588,4121715-4121770,412... 31 0.75
11_06_0395 + 23088737-23088823,23090198-23090346,23090570-230907... 30 1.7
12_02_0709 - 22359705-22360292,22360396-22360560,22360650-223611... 29 3.0
06_01_0080 + 644021-645463 29 3.0
01_01_0703 - 5425713-5425862,5426302-5426451,5426853-5426964,542... 29 3.0
03_03_0258 - 15905847-15905990,15906088-15906244,15906374-159065... 29 4.0
06_01_0349 + 2529279-2530446,2532232-2533036,2533066-2533106,253... 29 5.3
04_04_0124 + 22929700-22929761,22930192-22930310,22930459-229305... 28 7.0
03_04_0243 + 19298293-19299117 28 7.0
11_01_0355 + 2679561-2680985,2681183-2682295 28 9.3
07_03_0196 + 14995224-14995489,14995859-14995877,14996703-149968... 28 9.3
>12_01_0211 -
1601129-1601272,1601670-1602062,1602142-1602240,
1602920-1602988,1603071-1603328
Length = 320
Score = 109 bits (262), Expect = 2e-24
Identities = 50/83 (60%), Positives = 65/83 (78%)
Frame = +2
Query: 509 KGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKP 688
KGT+EII V ++K GDKVG+SE+ LL L I PFSYGLV+ VYDSG++F+PE+LD+
Sbjct: 152 KGTVEIITPVELIKKGDKVGSSESALLAKLGIRPFSYGLVITNVYDSGSVFSPEVLDLTE 211
Query: 689 EDLRAKFQAGVANVAALSLAIGY 757
EDL KF +GV+ VA++SLAI Y
Sbjct: 212 EDLMEKFASGVSMVASVSLAISY 234
Score = 101 bits (241), Expect = 8e-22
Identities = 50/96 (52%), Positives = 67/96 (69%), Gaps = 2/96 (2%)
Frame = +3
Query: 231 GKKHNDAQAIKDHLDN--NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARP 404
GK + IK H DN N +L+P + GNVG +FT+GDL EVR+++ + KV APAR
Sbjct: 57 GKNTLIRRCIKVHADNTGNKDFLELMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARV 116
Query: 405 GAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISR 512
G +AP+ VV+P NTGL P +TSFFQ L+IPTKI++
Sbjct: 117 GLVAPVDVVVPPGNTGLDPSQTSFFQVLNIPTKINK 152
Score = 71.7 bits (168), Expect = 6e-13
Identities = 36/61 (59%), Positives = 43/61 (70%)
Frame = +1
Query: 73 REDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRFSLRGSSIVLMGKNTMMR 252
+ KA K Y K+ QLLDEY K I ADNVGS Q+Q+IR LRG SIVLMGKNT++R
Sbjct: 4 KRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTLIR 63
Query: 253 K 255
+
Sbjct: 64 R 64
>11_01_0210 -
1647922-1648065,1648459-1648851,1648930-1649028,
1649706-1649774,1649877-1650134
Length = 320
Score = 109 bits (262), Expect = 2e-24
Identities = 50/83 (60%), Positives = 65/83 (78%)
Frame = +2
Query: 509 KGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKP 688
KGT+EII V ++K GDKVG+SE+ LL L I PFSYGLV+ VYDSG++F+PE+LD+
Sbjct: 152 KGTVEIITPVELIKKGDKVGSSESALLAKLGIRPFSYGLVITNVYDSGSVFSPEVLDLTE 211
Query: 689 EDLRAKFQAGVANVAALSLAIGY 757
EDL KF +GV+ VA++SLAI Y
Sbjct: 212 EDLMEKFASGVSMVASVSLAISY 234
Score = 101 bits (241), Expect = 8e-22
Identities = 50/96 (52%), Positives = 67/96 (69%), Gaps = 2/96 (2%)
Frame = +3
Query: 231 GKKHNDAQAIKDHLDN--NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARP 404
GK + IK H DN N +L+P + GNVG +FT+GDL EVR+++ + KV APAR
Sbjct: 57 GKNTLIRRCIKVHADNTGNKDFLELMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARV 116
Query: 405 GAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISR 512
G +AP+ VV+P NTGL P +TSFFQ L+IPTKI++
Sbjct: 117 GLVAPVDVVVPPGNTGLDPSQTSFFQVLNIPTKINK 152
Score = 71.7 bits (168), Expect = 6e-13
Identities = 36/61 (59%), Positives = 43/61 (70%)
Frame = +1
Query: 73 REDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRFSLRGSSIVLMGKNTMMR 252
+ KA K Y K+ QLLDEY K I ADNVGS Q+Q+IR LRG SIVLMGKNT++R
Sbjct: 4 KRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTLIR 63
Query: 253 K 255
+
Sbjct: 64 R 64
>08_01_0215 -
1714224-1714364,1714795-1715187,1715279-1715377,
1716248-1716316,1716408-1716665
Length = 319
Score = 108 bits (259), Expect = 5e-24
Identities = 49/83 (59%), Positives = 65/83 (78%)
Frame = +2
Query: 509 KGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKP 688
KGT+EII V ++K GDKVG+SE+ LL L I PFSYGLV+ VYDSG++F+PE+LD+
Sbjct: 152 KGTVEIITPVELIKKGDKVGSSESALLAKLGIRPFSYGLVITNVYDSGSVFSPEVLDLTE 211
Query: 689 EDLRAKFQAGVANVAALSLAIGY 757
+DL KF +GV+ VA++SLAI Y
Sbjct: 212 DDLMEKFASGVSMVASVSLAISY 234
Score = 101 bits (242), Expect = 6e-22
Identities = 50/96 (52%), Positives = 67/96 (69%), Gaps = 2/96 (2%)
Frame = +3
Query: 231 GKKHNDAQAIKDHLDN--NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARP 404
GK + IK H DN N +L+P + GNVG +FT+GDL EVR+++ + KV APAR
Sbjct: 57 GKNTLIRRCIKVHADNTGNKEFLELMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARV 116
Query: 405 GAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISR 512
G +AP+ VV+P NTGL P +TSFFQ L+IPTKI++
Sbjct: 117 GLVAPVDVVVPPGNTGLDPSQTSFFQVLNIPTKINK 152
Score = 71.7 bits (168), Expect = 6e-13
Identities = 36/61 (59%), Positives = 43/61 (70%)
Frame = +1
Query: 73 REDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRFSLRGSSIVLMGKNTMMR 252
+ KA K Y K+ QLLDEY K I ADNVGS Q+Q+IR LRG SIVLMGKNT++R
Sbjct: 4 KRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTLIR 63
Query: 253 K 255
+
Sbjct: 64 R 64
>11_01_0676 -
5511755-5511831,5512857-5513052,5513462-5513577,
5513752-5514597,5515515-5515766,5522344-5525206
Length = 1449
Score = 33.9 bits (74), Expect = 0.14
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 9/84 (10%)
Frame = +3
Query: 270 LDNNPALEKL-LPH--IKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSV---- 428
L N AL+KL LPH ++GN+GF+ + + ++ D +L++ A P + LS
Sbjct: 396 LGNIAALQKLVLPHNNLEGNMGFLSSLSECRQLEDLILDHNSFVGALPDHLGNLSARLIS 455
Query: 429 VIPAHN--TGLGPEKTSFFQALSI 494
I HN G PEK S +L +
Sbjct: 456 FIADHNKLAGSLPEKMSNLSSLEL 479
>11_01_0033 -
251730-251855,252068-252144,252228-252318,252644-252704,
252800-252858,252955-253045,253238-253406,253760-253787
Length = 233
Score = 33.1 bits (72), Expect = 0.25
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +1
Query: 31 KFHRSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRFSLR 210
K R+ TLS+ ++ K I ++ Y ++ DN+ +Q+++ +R L+
Sbjct: 3 KSKRNRPVTLSKTKKKPGLERKGKVVTDIKDAVEHYANAYVFTYDNMRNQKLKDLREQLK 62
Query: 211 GSS-IVLMGKNTM 246
SS I L GK M
Sbjct: 63 SSSRIFLAGKKVM 75
>12_01_0032 -
266954-267079,267204-267245,267290-267366,267450-267540,
267864-267924,268021-268079,268176-268266,268481-268698,
268818-268824,269013-269148,270064-270307
Length = 383
Score = 32.3 bits (70), Expect = 0.43
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +1
Query: 43 SPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRFSLRGSS- 219
S TLS+ ++ K I ++ Y ++ DN+ +Q+++ +R L+ SS
Sbjct: 143 SSAVTLSKTKKKPGLERKGKVVTDIKDAVEHYANAYVFTYDNMRNQKLKDLREQLKSSSR 202
Query: 220 IVLMGKNTM 246
I L GK M
Sbjct: 203 IFLAGKKVM 211
>02_01_0561 +
4120268-4120339,4121462-4121588,4121715-4121770,
4121841-4121912,4122017-4122128,4122247-4122284,
4122412-4122513,4122619-4122675,4122755-4122826,
4122992-4123093,4123210-4123405,4123988-4124094,
4124497-4124691,4124771-4124857,4124905-4124913,
4125599-4125703,4126067-4126164,4126250-4126328,
4126912-4127000,4127086-4127200
Length = 629
Score = 31.5 bits (68), Expect = 0.75
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 6/59 (10%)
Frame = +3
Query: 282 PALEK-LLPHIKGN---VGFVFTRGDLVEV--RDKLLENKVQAPARPGAIAPLSVVIPA 440
PAL+K L H K VG + T GDL + + L+++KV P PGA+ +S + PA
Sbjct: 131 PALDKDALWHFKPEKLGVGDIITGGDLYAIVNENTLMQHKVALP--PGAMGKISYIAPA 187
>11_06_0395 + 23088737-23088823,23090198-23090346,23090570-23090708,
23090795-23090889,23090967-23091080,23091674-23091803,
23091931-23092052,23092889-23093007,23093946-23094034,
23094072-23094245,23094310-23094616,23094726-23095180,
23095334-23096315,23096381-23097396,23097757-23097792,
23098065-23098130
Length = 1359
Score = 30.3 bits (65), Expect = 1.7
Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = +1
Query: 136 YPKCFI--VGADNVGSQQMQQIRFSLRGSSIVLMGKNTMMRKPSKTTWTTIQPSRNCC 303
Y KC I VG DN+ Q MQQ R SL I+ P+K T + +Q C
Sbjct: 1292 YTKCLIISVGRDNIPWQWMQQNRTSLETLEILKPENLIWAVSPAKLTISEVQDVSPYC 1349
>12_02_0709 -
22359705-22360292,22360396-22360560,22360650-22361157,
22361159-22361577,22362261-22362722,22362853-22364415
Length = 1234
Score = 29.5 bits (63), Expect = 3.0
Identities = 22/75 (29%), Positives = 28/75 (37%)
Frame = -2
Query: 610 WRDVQHVEKGGFRSSNLVTGLQDVYIVDDFNSTLEILVGIERAWKKEVFSGPRPVLWAGM 431
WR +QH G S+NL L +Y + F L + K + W
Sbjct: 57 WRLIQHDYGDGDGSANLTPALNVLYSLALFQGVLFFYQWVSYFAGKRLIEKVASKYWQNS 116
Query: 430 TTDNGAMAPGRAGAW 386
GA A RAGAW
Sbjct: 117 KEAGGAGA--RAGAW 129
>06_01_0080 + 644021-645463
Length = 480
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -1
Query: 506 NLGRDRKSLEERGLLWTEAGVVGGND 429
N R K++EERGLL+ GV GG +
Sbjct: 110 NTERREKAMEERGLLYLGMGVSGGEE 135
>01_01_0703 -
5425713-5425862,5426302-5426451,5426853-5426964,
5427120-5427481,5427578-5427712,5427812-5427889,
5427989-5428174,5428266-5428452,5428552-5428658,
5428732-5428806,5428885-5429040,5429165-5429437,
5429548-5429643,5429724-5429814,5429883-5430385
Length = 886
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/51 (27%), Positives = 31/51 (60%)
Frame = +2
Query: 521 EIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEI 673
E++ +++P D VG S +++ +++ P+S VV+ +Y+S + A +I
Sbjct: 346 EMLPSGFLIRPSD-VGGSVIHIVDHMDLEPWSVPEVVRPLYESSAMVAQKI 395
>03_03_0258 -
15905847-15905990,15906088-15906244,15906374-15906504,
15906991-15907126,15907193-15907464,15907874-15908169,
15908279-15908646,15908922-15908987,15909064-15909129,
15909226-15909297,15909391-15909459,15909549-15909620,
15909708-15909776,15909874-15909945,15910046-15910178,
15911223-15911361
Length = 753
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -3
Query: 651 PESYTCLTTRPYENGEMFNMLRRVASEAPTLSPGFKMCTSL 529
PE LT RP +G+ FN LR ++ +PT G + S+
Sbjct: 358 PEKNEPLTLRPIASGK-FNQLRTISIISPTAKEGLQKTVSM 397
>06_01_0349 +
2529279-2530446,2532232-2533036,2533066-2533106,
2533219-2533424
Length = 739
Score = 28.7 bits (61), Expect = 5.3
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = +1
Query: 235 KNTMMRKPSKTTWTTIQPSRNCCHTSRATLASCSPAETSLRSVTNCWRTKSKLQLVLVPL 414
K+ MM ++W +QP +R L S + LR+V WR+ ++LQ + PL
Sbjct: 392 KSCMMAAVQSSSWADLQPELLGLVLTR--LPSLAD-RVRLRAVCRPWRSNARLQPLPPPL 448
Query: 415 P 417
P
Sbjct: 449 P 449
>04_04_0124 +
22929700-22929761,22930192-22930310,22930459-22930541,
22930640-22930738,22930769-22930786,22931044-22931110,
22931244-22931319,22931450-22931516,22932303-22932520,
22933124-22933191,22933743-22933822,22934362-22934448,
22934524-22934631,22934753-22934848,22935045-22935140,
22936826-22937155
Length = 557
Score = 28.3 bits (60), Expect = 7.0
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = -2
Query: 574 RSSNLVTGLQDVYIVDDFNSTLEILVGIERAWKKEVFSGPRPVLWAGMTTDNGAMAPGRA 395
+SS L G Q + I + F + VG+ +++FS + G+ TD A+ PG +
Sbjct: 212 QSSALRVGQQCLAIGNPFGFDHALTVGVISGLNRDIFSQAGVTIGGGIQTD-AAINPGNS 270
Query: 394 G 392
G
Sbjct: 271 G 271
>03_04_0243 + 19298293-19299117
Length = 274
Score = 28.3 bits (60), Expect = 7.0
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = -2
Query: 433 MTTDNGAMAPGRAGAWTLFSNSLSRTSTRSPRVNTKPTLPLMCGNSFS 290
+ TD+ + APG A A + S SRTS +P ++ PT P +S +
Sbjct: 172 VVTDSLSRAPGAAWAAAMAPTSWSRTS--APPASSSPTSPRRARSSLT 217
>11_01_0355 + 2679561-2680985,2681183-2682295
Length = 845
Score = 27.9 bits (59), Expect = 9.3
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = +1
Query: 271 WTTIQPSRNCCHTSRATLASCSPAETSLRSVTNCWRTKSKL 393
W ++ HTS TL+ SP+ +S+ T+C+ + +
Sbjct: 480 WNPMRNGSAPHHTSELTLSFSSPSPSSISGYTSCYNNNNMM 520
>07_03_0196 +
14995224-14995489,14995859-14995877,14996703-14996839,
14998365-14998457,15001597-15001932,15003035-15003503
Length = 439
Score = 27.9 bits (59), Expect = 9.3
Identities = 12/43 (27%), Positives = 18/43 (41%)
Frame = -1
Query: 410 GTRTSWSLDFVLQQFVTDLNEVSAGEHEANVALDVWQQFLEGW 282
G +WS F +LN +S H+ V L+ W + W
Sbjct: 197 GNAENWSSQGDKDDFYNELNTISEARHKNLVKLEGWCCHINAW 239
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,645,188
Number of Sequences: 37544
Number of extensions: 505697
Number of successful extensions: 1473
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1418
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1473
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2027850416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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